Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS08915

Experiment: R2A with benzoic 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with benzoic 0.1 mg/ml
2,226,903	+				-0.3
2,226,994	+				+0.3
2,226,995	-				+1.2
2,226,999	-				+0.2
2,227,012	+				-1.5
2,227,085	+		CA265_RS08910	0.11	-0.2
2,227,182	-		CA265_RS08910	0.23	-2.4
2,227,268	+		CA265_RS08910	0.33	+0.6
2,227,269	-		CA265_RS08910	0.33	-1.3
2,227,321	+		CA265_RS08910	0.40	-1.3
2,227,322	-		CA265_RS08910	0.40	-1.3
2,227,496	+		CA265_RS08910	0.61	-0.8
2,227,583	+		CA265_RS08910	0.72	-1.1
2,227,621	+		CA265_RS08910	0.77	-1.8
2,227,690	+		CA265_RS08910	0.85	-2.8
2,227,742	+				-0.8
2,227,743	-				-0.7
2,227,747	+				-2.3
2,227,775	-				-0.9
2,227,802	+				-0.3
2,227,802	+				+0.0
2,227,803	-				-2.8
2,227,872	-				-2.1
2,227,890	+		CA265_RS08915	0.11	-0.0
2,227,939	+		CA265_RS08915	0.17	+0.4
2,227,940	-		CA265_RS08915	0.18	-2.8
2,227,943	+		CA265_RS08915	0.18	+0.1
2,227,944	-		CA265_RS08915	0.18	+1.2
2,227,944	-		CA265_RS08915	0.18	+0.4
2,227,946	+		CA265_RS08915	0.18	+0.6
2,227,947	-		CA265_RS08915	0.19	-0.7
2,227,947	-		CA265_RS08915	0.19	-0.3
2,227,966	+		CA265_RS08915	0.21	+0.2
2,227,995	+		CA265_RS08915	0.25	+0.9
2,227,996	-		CA265_RS08915	0.25	+0.4
2,228,028	+		CA265_RS08915	0.30	-0.0
2,228,139	+		CA265_RS08915	0.45	+0.0
2,228,140	-		CA265_RS08915	0.46	-0.1
2,228,211	+		CA265_RS08915	0.56	+0.2
2,228,298	+		CA265_RS08915	0.68	+0.6
2,228,325	-		CA265_RS08915	0.71	+0.9
2,228,325	-		CA265_RS08915	0.71	+0.5
2,228,386	-		CA265_RS08915	0.80	+0.4
2,228,403	-		CA265_RS08915	0.82	+0.5
2,228,506	+				-0.2
2,228,510	-				+0.2
2,228,549	+				-0.5
2,228,631	-		CA265_RS08920	0.20	+0.4
2,228,631	-		CA265_RS08920	0.20	-0.9
2,228,633	+		CA265_RS08920	0.21	-0.8
2,228,633	+		CA265_RS08920	0.21	-0.5
2,228,643	+		CA265_RS08920	0.23	-0.2
2,228,690	+		CA265_RS08920	0.35	-0.1
2,228,691	-		CA265_RS08920	0.35	+0.4
2,228,691	-		CA265_RS08920	0.35	+0.3
2,228,725	-		CA265_RS08920	0.43	-0.2
2,228,732	+		CA265_RS08920	0.45	-0.3
2,228,839	+		CA265_RS08920	0.70	-0.2
2,228,892	-		CA265_RS08920	0.83	+1.1
2,228,904	-		CA265_RS08920	0.86	-1.6
2,228,967	-				-0.3
2,229,007	+				+0.1
2,229,051	+				-0.1
2,229,052	-				+0.7
2,229,057	-				-0.6
2,229,146	-				-0.1
2,229,146	-				-0.3
2,229,146	-				-0.5
2,229,149	+				-0.4
2,229,150	-				+0.3
2,229,168	-				-0.5
2,229,255	-		CA265_RS08925	0.11	+1.7
2,229,295	-		CA265_RS08925	0.13	+0.7
2,229,326	+		CA265_RS08925	0.15	+1.2
2,229,350	+		CA265_RS08925	0.16	-1.0
2,229,375	+		CA265_RS08925	0.17	-0.4
2,229,382	-		CA265_RS08925	0.18	-0.6
2,229,399	+		CA265_RS08925	0.19	-0.0
2,229,399	+		CA265_RS08925	0.19	-0.2
2,229,435	-		CA265_RS08925	0.21	+0.3
2,229,472	+		CA265_RS08925	0.22	-0.5
2,229,508	+		CA265_RS08925	0.24	-0.5
2,229,509	-		CA265_RS08925	0.24	-0.4
2,229,513	-		CA265_RS08925	0.25	-0.6