Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS08140

Experiment: R2A with benzoic 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with benzoic 0.1 mg/ml
2,017,955	+				+0.2
2,017,996	+				+0.6
2,018,014	+				+0.1
2,018,030	+				+1.0
2,018,054	+				-0.7
2,018,055	-				+0.6
2,018,163	+				-0.0
2,018,224	+		CA265_RS08135	0.14	+0.2
2,018,227	+		CA265_RS08135	0.15	-0.2
2,018,227	+		CA265_RS08135	0.15	-1.1
2,018,321	-		CA265_RS08135	0.27	-0.1
2,018,321	-		CA265_RS08135	0.27	-0.0
2,018,451	+		CA265_RS08135	0.43	+1.1
2,018,502	-		CA265_RS08135	0.50	-0.3
2,018,721	+		CA265_RS08135	0.78	-0.6
2,018,775	-		CA265_RS08135	0.85	+0.7
2,018,775	-		CA265_RS08135	0.85	-0.5
2,018,810	+		CA265_RS08135	0.89	+0.9
2,018,810	+		CA265_RS08135	0.89	+0.0
2,018,810	+		CA265_RS08135	0.89	+0.3
2,018,811	-		CA265_RS08135	0.90	+0.4
2,018,874	+				+0.2
2,018,899	+				+1.2
2,018,900	-				+0.3
2,019,108	+		CA265_RS08140	0.15	+0.0
2,019,119	+		CA265_RS08140	0.16	-0.2
2,019,119	+		CA265_RS08140	0.16	+1.3
2,019,120	-		CA265_RS08140	0.16	-0.2
2,019,120	-		CA265_RS08140	0.16	+0.1
2,019,125	-		CA265_RS08140	0.17	-1.8
2,019,265	-		CA265_RS08140	0.29	+0.0
2,019,283	-		CA265_RS08140	0.30	-0.1
2,019,372	+		CA265_RS08140	0.38	-0.5
2,019,400	+		CA265_RS08140	0.41	+0.8
2,019,401	-		CA265_RS08140	0.41	-0.4
2,019,403	-		CA265_RS08140	0.41	-1.3
2,019,403	-		CA265_RS08140	0.41	-0.3
2,019,439	+		CA265_RS08140	0.44	-0.2
2,019,440	-		CA265_RS08140	0.44	-0.2
2,019,510	+		CA265_RS08140	0.50	+0.5
2,019,525	+		CA265_RS08140	0.51	+1.2
2,019,586	+		CA265_RS08140	0.57	+0.4
2,019,591	+		CA265_RS08140	0.57	+0.6
2,019,592	-		CA265_RS08140	0.57	-0.1
2,019,630	+		CA265_RS08140	0.61	-0.3
2,019,642	+				+0.6
2,019,643	-		CA265_RS08140	0.62	+1.2
2,019,648	-		CA265_RS08140	0.62	-0.4
2,019,648	-		CA265_RS08140	0.62	-0.3
2,019,648	-		CA265_RS08140	0.62	-0.1
2,019,720	-		CA265_RS08140	0.68	-0.3
2,019,738	+		CA265_RS08140	0.70	+0.3
2,019,758	-		CA265_RS08140	0.72	-0.5
2,019,759	+		CA265_RS08140	0.72	+0.1
2,019,760	-		CA265_RS08140	0.72	-0.6
2,019,843	-		CA265_RS08140	0.79	+0.5
2,019,933	+		CA265_RS08140	0.87	-0.1
2,019,994	-				+0.1
2,020,045	-				-0.6
2,020,049	-				-0.6
2,020,069	+				+0.4
2,020,069	+				+0.5
2,020,075	-				-0.5
2,020,083	+				+0.1
2,020,086	-				+1.1
2,020,110	+				-0.4
2,020,130	+				+1.5
2,020,131	-				-0.6
2,020,131	-				+0.6
2,020,232	+				+0.4
2,020,277	-				-0.1
2,020,288	-				+0.0
2,020,297	+				+0.9
2,020,356	+				+0.1
2,020,361	-				-1.5
2,020,401	+				+0.2
2,020,482	+				+0.2
2,020,482	+				-0.5
2,020,483	-				-1.6
2,020,483	-				+0.0
2,020,542	+		CA265_RS08145	0.12	+1.3
2,020,543	-		CA265_RS08145	0.12	-0.1
2,020,552	-		CA265_RS08145	0.12	+0.9
2,020,662	+		CA265_RS08145	0.20	+0.3
2,020,680	-		CA265_RS08145	0.21	+0.3
2,020,717	+		CA265_RS08145	0.23	-0.0
2,020,723	+		CA265_RS08145	0.24	-0.0
2,020,817	+		CA265_RS08145	0.30	-1.4
2,020,818	-		CA265_RS08145	0.30	-0.2
2,020,838	-		CA265_RS08145	0.31	-0.0
2,020,869	+		CA265_RS08145	0.33	+1.0
2,020,875	+		CA265_RS08145	0.34	-0.5
2,020,897	+		CA265_RS08145	0.35	-0.0
2,020,897	+		CA265_RS08145	0.35	+0.3
2,020,898	-		CA265_RS08145	0.35	-1.4
2,020,906	+		CA265_RS08145	0.36	+0.1
2,020,907	-		CA265_RS08145	0.36	-0.7
2,020,907	-		CA265_RS08145	0.36	+0.3
2,020,950	+		CA265_RS08145	0.38	-1.1
2,020,950	+		CA265_RS08145	0.38	-0.6
2,020,950	+		CA265_RS08145	0.38	-2.0
2,020,961	-		CA265_RS08145	0.39	+0.2
2,020,978	-		CA265_RS08145	0.40	-0.5
2,020,982	-		CA265_RS08145	0.41	+0.2
2,021,003	-		CA265_RS08145	0.42	-0.2
2,021,005	-		CA265_RS08145	0.42	+0.2