Experiment: Nickel (II) chloride 0.625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_27255 and AO353_27260 are separated by 97 nucleotides AO353_27260 and AO353_27265 overlap by 26 nucleotides AO353_27265 and AO353_27270 are separated by 9 nucleotides
AO353_27255: AO353_27255 - late control protein, at 5,960,924 to 5,961,970
_27255
AO353_27260: AO353_27260 - phage tail protein, at 5,962,068 to 5,962,274
_27260
AO353_27265: AO353_27265 - phage tail protein, at 5,962,249 to 5,963,094
_27265
AO353_27270: AO353_27270 - tail tape measure protein, at 5,963,104 to 5,965,953
_27270
Position (kb) 5962
5963 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5961.069 kb on + strand, within AO353_27255 at 5961.069 kb on + strand, within AO353_27255 at 5961.069 kb on + strand, within AO353_27255 at 5961.070 kb on - strand, within AO353_27255 at 5961.070 kb on - strand, within AO353_27255 at 5961.070 kb on - strand, within AO353_27255 at 5961.106 kb on + strand, within AO353_27255 at 5961.233 kb on - strand, within AO353_27255 at 5961.233 kb on - strand, within AO353_27255 at 5961.233 kb on - strand, within AO353_27255 at 5961.233 kb on - strand, within AO353_27255 at 5961.496 kb on - strand, within AO353_27255 at 5961.524 kb on - strand, within AO353_27255 at 5961.595 kb on + strand, within AO353_27255 at 5961.789 kb on + strand, within AO353_27255 at 5961.790 kb on - strand, within AO353_27255 at 5962.082 kb on + strand at 5962.082 kb on + strand at 5962.082 kb on + strand at 5962.083 kb on - strand at 5962.083 kb on - strand at 5962.083 kb on - strand at 5962.213 kb on + strand, within AO353_27260 at 5962.214 kb on - strand, within AO353_27260 at 5962.351 kb on - strand, within AO353_27265 at 5962.385 kb on + strand, within AO353_27265 at 5962.450 kb on + strand, within AO353_27265 at 5962.450 kb on + strand, within AO353_27265 at 5962.451 kb on - strand, within AO353_27265 at 5962.619 kb on + strand, within AO353_27265 at 5962.619 kb on + strand, within AO353_27265 at 5962.696 kb on - strand, within AO353_27265 at 5962.822 kb on + strand, within AO353_27265 at 5962.822 kb on + strand, within AO353_27265 at 5962.822 kb on + strand, within AO353_27265 at 5962.854 kb on - strand, within AO353_27265 at 5962.894 kb on + strand, within AO353_27265 at 5963.058 kb on - strand at 5963.085 kb on + strand at 5963.085 kb on + strand at 5963.085 kb on + strand at 5963.085 kb on + strand at 5963.085 kb on + strand at 5963.085 kb on + strand at 5963.086 kb on - strand at 5963.086 kb on - strand at 5963.086 kb on - strand at 5963.086 kb on - strand at 5963.086 kb on - strand at 5963.086 kb on - strand at 5963.086 kb on - strand at 5963.086 kb on - strand at 5963.086 kb on - strand at 5963.086 kb on - strand at 5963.086 kb on - strand at 5963.087 kb on + strand at 5963.087 kb on + strand at 5963.087 kb on + strand at 5963.087 kb on + strand at 5963.087 kb on + strand at 5963.087 kb on + strand at 5963.087 kb on + strand at 5963.087 kb on + strand at 5963.087 kb on + strand at 5963.087 kb on + strand at 5963.087 kb on + strand at 5963.088 kb on - strand at 5963.088 kb on - strand at 5963.088 kb on - strand at 5963.088 kb on - strand at 5963.088 kb on - strand at 5963.088 kb on - strand at 5963.088 kb on - strand at 5963.088 kb on - strand at 5963.088 kb on - strand at 5963.088 kb on - strand at 5963.088 kb on - strand at 5963.088 kb on - strand at 5963.105 kb on + strand at 5963.238 kb on + strand at 5963.238 kb on + strand at 5963.239 kb on - strand at 5963.250 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 0.625 mM remove 5,961,069 + AO353_27255 0.14 -0.3 5,961,069 + AO353_27255 0.14 +0.6 5,961,069 + AO353_27255 0.14 -1.1 5,961,070 - AO353_27255 0.14 +0.2 5,961,070 - AO353_27255 0.14 +0.3 5,961,070 - AO353_27255 0.14 +0.4 5,961,106 + AO353_27255 0.17 +0.3 5,961,233 - AO353_27255 0.30 +0.9 5,961,233 - AO353_27255 0.30 -1.9 5,961,233 - AO353_27255 0.30 +0.1 5,961,233 - AO353_27255 0.30 -1.9 5,961,496 - AO353_27255 0.55 +1.2 5,961,524 - AO353_27255 0.57 -2.9 5,961,595 + AO353_27255 0.64 -1.1 5,961,789 + AO353_27255 0.83 -2.1 5,961,790 - AO353_27255 0.83 -1.3 5,962,082 + -0.1 5,962,082 + +0.0 5,962,082 + +1.0 5,962,083 - -0.3 5,962,083 - +0.5 5,962,083 - -1.4 5,962,213 + AO353_27260 0.70 -1.8 5,962,214 - AO353_27260 0.71 -0.3 5,962,351 - AO353_27265 0.12 +1.2 5,962,385 + AO353_27265 0.16 -0.4 5,962,450 + AO353_27265 0.24 +0.6 5,962,450 + AO353_27265 0.24 +0.9 5,962,451 - AO353_27265 0.24 +0.2 5,962,619 + AO353_27265 0.44 -0.4 5,962,619 + AO353_27265 0.44 +0.1 5,962,696 - AO353_27265 0.53 +0.9 5,962,822 + AO353_27265 0.68 +0.0 5,962,822 + AO353_27265 0.68 -0.4 5,962,822 + AO353_27265 0.68 +1.2 5,962,854 - AO353_27265 0.72 +0.6 5,962,894 + AO353_27265 0.76 +0.8 5,963,058 - -0.5 5,963,085 + +0.6 5,963,085 + -0.9 5,963,085 + -1.5 5,963,085 + +1.0 5,963,085 + +1.0 5,963,085 + +2.2 5,963,086 - +0.1 5,963,086 - +0.1 5,963,086 - +0.3 5,963,086 - +0.0 5,963,086 - -0.8 5,963,086 - +0.4 5,963,086 - +0.3 5,963,086 - +0.6 5,963,086 - +0.7 5,963,086 - -0.7 5,963,086 - +0.6 5,963,087 + +0.2 5,963,087 + -2.3 5,963,087 + -0.5 5,963,087 + +1.0 5,963,087 + +0.2 5,963,087 + -0.8 5,963,087 + +1.2 5,963,087 + -0.8 5,963,087 + -1.3 5,963,087 + +0.2 5,963,087 + -0.4 5,963,088 - -0.4 5,963,088 - +1.0 5,963,088 - -0.6 5,963,088 - -0.5 5,963,088 - -2.1 5,963,088 - -1.0 5,963,088 - -0.1 5,963,088 - +0.3 5,963,088 - +1.4 5,963,088 - -1.0 5,963,088 - +1.3 5,963,088 - -0.6 5,963,105 + -0.3 5,963,238 + -0.1 5,963,238 + +0.5 5,963,239 - +0.0 5,963,250 - -0.5
Or see this region's nucleotide sequence