Experiment: Nickel (II) chloride 0.625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_03610 and AO353_03615 are separated by 666 nucleotides AO353_03615 and AO353_03620 are separated by 92 nucleotides AO353_03620 and AO353_03625 are separated by 3 nucleotides
AO353_03610: AO353_03610 - arylsulfate sulfotransferase, at 770,538 to 770,873
_03610
AO353_03615: AO353_03615 - cold-shock protein, at 771,540 to 772,142
_03615
AO353_03620: AO353_03620 - hypothetical protein, at 772,235 to 772,441
_03620
AO353_03625: AO353_03625 - histidine triad (HIT) protein, at 772,445 to 772,870
_03625
Position (kb) 771
772
773 Strain fitness (log2 ratio) -2
-1
0
1
2 at 770.550 kb on - strand at 770.550 kb on - strand at 770.574 kb on + strand, within AO353_03610 at 770.574 kb on + strand, within AO353_03610 at 770.574 kb on + strand, within AO353_03610 at 770.574 kb on + strand, within AO353_03610 at 770.575 kb on - strand, within AO353_03610 at 770.575 kb on - strand, within AO353_03610 at 770.642 kb on + strand, within AO353_03610 at 770.642 kb on + strand, within AO353_03610 at 770.642 kb on + strand, within AO353_03610 at 770.643 kb on - strand, within AO353_03610 at 770.643 kb on - strand, within AO353_03610 at 770.651 kb on - strand, within AO353_03610 at 770.651 kb on - strand, within AO353_03610 at 770.651 kb on - strand, within AO353_03610 at 770.651 kb on - strand, within AO353_03610 at 770.713 kb on + strand, within AO353_03610 at 770.713 kb on + strand, within AO353_03610 at 770.713 kb on + strand, within AO353_03610 at 770.714 kb on - strand, within AO353_03610 at 770.714 kb on - strand, within AO353_03610 at 770.714 kb on - strand, within AO353_03610 at 770.885 kb on + strand at 770.886 kb on - strand at 770.886 kb on - strand at 770.886 kb on - strand at 770.886 kb on - strand at 770.886 kb on - strand at 770.886 kb on - strand at 770.907 kb on + strand at 770.907 kb on + strand at 770.907 kb on + strand at 770.908 kb on - strand at 770.908 kb on - strand at 770.908 kb on - strand at 770.908 kb on - strand at 770.908 kb on - strand at 770.908 kb on - strand at 770.908 kb on - strand at 770.944 kb on + strand at 770.944 kb on + strand at 770.945 kb on - strand at 770.945 kb on - strand at 770.945 kb on - strand at 770.945 kb on - strand at 770.945 kb on - strand at 770.945 kb on - strand at 770.945 kb on - strand at 770.960 kb on + strand at 770.960 kb on + strand at 770.961 kb on - strand at 770.964 kb on + strand at 770.964 kb on + strand at 770.964 kb on + strand at 770.964 kb on + strand at 770.964 kb on + strand at 770.964 kb on + strand at 770.964 kb on + strand at 770.964 kb on + strand at 770.964 kb on + strand at 770.965 kb on - strand at 770.965 kb on - strand at 770.965 kb on - strand at 770.965 kb on - strand at 770.965 kb on - strand at 770.965 kb on - strand at 770.965 kb on - strand at 770.965 kb on - strand at 770.965 kb on - strand at 770.966 kb on + strand at 770.980 kb on + strand at 770.980 kb on + strand at 770.980 kb on + strand at 770.980 kb on + strand at 770.980 kb on + strand at 770.980 kb on + strand at 770.981 kb on - strand at 770.981 kb on - strand at 770.981 kb on - strand at 770.981 kb on - strand at 770.981 kb on - strand at 770.981 kb on - strand at 770.994 kb on + strand at 770.994 kb on + strand at 770.994 kb on + strand at 770.994 kb on + strand at 770.995 kb on - strand at 770.995 kb on - strand at 770.995 kb on - strand at 771.025 kb on + strand at 771.026 kb on - strand at 771.036 kb on + strand at 771.036 kb on + strand at 771.036 kb on + strand at 771.036 kb on + strand at 771.036 kb on + strand at 771.036 kb on + strand at 771.036 kb on + strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.046 kb on + strand at 771.047 kb on - strand at 771.049 kb on - strand at 771.049 kb on - strand at 771.093 kb on + strand at 771.094 kb on - strand at 771.207 kb on + strand at 771.207 kb on + strand at 771.207 kb on + strand at 771.208 kb on - strand at 771.208 kb on - strand at 771.209 kb on + strand at 771.209 kb on + strand at 771.209 kb on + strand at 771.209 kb on + strand at 771.209 kb on + strand at 771.209 kb on + strand at 771.210 kb on - strand at 771.210 kb on - strand at 771.210 kb on - strand at 771.288 kb on - strand at 771.288 kb on - strand at 771.397 kb on + strand at 771.397 kb on + strand at 771.397 kb on + strand at 771.397 kb on + strand at 771.398 kb on - strand at 771.398 kb on - strand at 771.438 kb on + strand at 771.438 kb on + strand at 771.438 kb on + strand at 771.453 kb on + strand at 771.522 kb on + strand at 771.599 kb on + strand at 771.600 kb on - strand at 771.600 kb on - strand at 771.625 kb on - strand, within AO353_03615 at 771.648 kb on + strand, within AO353_03615 at 771.649 kb on - strand, within AO353_03615 at 771.882 kb on + strand, within AO353_03615 at 771.883 kb on - strand, within AO353_03615 at 772.004 kb on + strand, within AO353_03615 at 772.145 kb on + strand at 772.145 kb on + strand at 772.145 kb on + strand at 772.145 kb on + strand at 772.145 kb on + strand at 772.146 kb on - strand at 772.146 kb on - strand at 772.146 kb on - strand at 772.146 kb on - strand at 772.146 kb on - strand at 772.146 kb on - strand at 772.146 kb on - strand at 772.146 kb on - strand at 772.164 kb on - strand at 772.239 kb on + strand at 772.240 kb on - strand at 772.502 kb on + strand, within AO353_03625 at 772.502 kb on + strand, within AO353_03625 at 772.503 kb on - strand, within AO353_03625 at 772.524 kb on + strand, within AO353_03625 at 772.524 kb on + strand, within AO353_03625 at 772.524 kb on + strand, within AO353_03625 at 772.525 kb on - strand, within AO353_03625 at 772.525 kb on - strand, within AO353_03625 at 772.525 kb on - strand, within AO353_03625 at 772.525 kb on - strand, within AO353_03625 at 772.582 kb on + strand, within AO353_03625 at 772.582 kb on + strand, within AO353_03625 at 772.583 kb on - strand, within AO353_03625 at 772.583 kb on - strand, within AO353_03625 at 772.583 kb on - strand, within AO353_03625 at 772.604 kb on + strand, within AO353_03625 at 772.604 kb on + strand, within AO353_03625 at 772.604 kb on + strand, within AO353_03625 at 772.604 kb on + strand, within AO353_03625 at 772.604 kb on + strand, within AO353_03625 at 772.605 kb on - strand, within AO353_03625 at 772.605 kb on - strand, within AO353_03625 at 772.605 kb on - strand, within AO353_03625 at 772.605 kb on - strand, within AO353_03625 at 772.605 kb on - strand, within AO353_03625 at 772.605 kb on - strand, within AO353_03625 at 772.605 kb on - strand, within AO353_03625 at 772.745 kb on - strand, within AO353_03625 at 772.780 kb on - strand, within AO353_03625 at 772.780 kb on - strand, within AO353_03625 at 772.811 kb on + strand, within AO353_03625 at 772.812 kb on - strand, within AO353_03625 at 772.859 kb on + strand at 772.859 kb on + strand at 772.860 kb on - strand at 772.861 kb on - strand at 772.926 kb on - strand at 772.935 kb on + strand at 772.936 kb on - strand at 772.936 kb on - strand at 772.936 kb on - strand at 772.937 kb on + strand at 772.937 kb on + strand at 772.937 kb on + strand at 772.937 kb on + strand at 772.937 kb on + strand at 772.937 kb on + strand at 772.937 kb on + strand at 772.937 kb on + strand at 772.937 kb on + strand at 772.937 kb on + strand at 772.937 kb on + strand at 772.937 kb on + strand at 772.938 kb on - strand at 772.938 kb on - strand at 772.938 kb on - strand at 772.938 kb on - strand at 772.938 kb on - strand at 772.938 kb on - strand at 772.938 kb on - strand at 772.938 kb on - strand at 772.938 kb on - strand at 772.938 kb on - strand at 772.938 kb on - strand at 772.938 kb on - strand at 772.938 kb on - strand at 772.939 kb on + strand at 772.939 kb on + strand at 772.939 kb on + strand at 772.940 kb on - strand at 772.940 kb on - strand at 772.940 kb on - strand at 772.940 kb on - strand at 772.940 kb on - strand at 772.940 kb on - strand at 772.940 kb on - strand at 772.940 kb on - strand at 772.940 kb on - strand at 772.940 kb on - strand at 772.990 kb on + strand at 773.019 kb on - strand at 773.119 kb on + strand at 773.119 kb on + strand at 773.119 kb on + strand at 773.119 kb on + strand at 773.119 kb on + strand at 773.120 kb on - strand at 773.120 kb on - strand at 773.120 kb on - strand at 773.120 kb on - strand at 773.131 kb on + strand at 773.131 kb on + strand at 773.131 kb on + strand at 773.131 kb on + strand at 773.131 kb on + strand at 773.131 kb on + strand at 773.131 kb on + strand at 773.132 kb on - strand at 773.132 kb on - strand at 773.132 kb on - strand at 773.132 kb on - strand at 773.132 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 0.625 mM remove 770,550 - +1.1 770,550 - -0.3 770,574 + AO353_03610 0.11 -0.8 770,574 + AO353_03610 0.11 -2.1 770,574 + AO353_03610 0.11 -1.5 770,574 + AO353_03610 0.11 -0.7 770,575 - AO353_03610 0.11 +0.8 770,575 - AO353_03610 0.11 +0.4 770,642 + AO353_03610 0.31 +0.7 770,642 + AO353_03610 0.31 +0.4 770,642 + AO353_03610 0.31 -0.0 770,643 - AO353_03610 0.31 +0.3 770,643 - AO353_03610 0.31 +0.8 770,651 - AO353_03610 0.34 -2.5 770,651 - AO353_03610 0.34 -0.7 770,651 - AO353_03610 0.34 +0.6 770,651 - AO353_03610 0.34 -0.3 770,713 + AO353_03610 0.52 -0.8 770,713 + AO353_03610 0.52 +1.0 770,713 + AO353_03610 0.52 -0.0 770,714 - AO353_03610 0.52 -0.4 770,714 - AO353_03610 0.52 +0.6 770,714 - AO353_03610 0.52 +0.4 770,885 + -0.2 770,886 - -1.2 770,886 - +0.6 770,886 - +1.0 770,886 - -1.0 770,886 - -0.3 770,886 - -0.3 770,907 + +0.2 770,907 + -0.2 770,907 + +0.6 770,908 - +0.2 770,908 - +1.6 770,908 - -1.0 770,908 - -0.8 770,908 - -1.4 770,908 - -1.2 770,908 - +0.7 770,944 + -0.8 770,944 + -1.1 770,945 - +0.5 770,945 - -0.5 770,945 - -0.1 770,945 - -0.3 770,945 - -1.7 770,945 - -0.5 770,945 - +0.2 770,960 + -0.3 770,960 + -0.3 770,961 - -0.1 770,964 + -0.9 770,964 + -0.0 770,964 + -0.3 770,964 + -0.0 770,964 + -0.9 770,964 + +0.8 770,964 + -1.3 770,964 + -0.0 770,964 + +0.4 770,965 - -0.6 770,965 - -0.5 770,965 - +0.7 770,965 - -0.3 770,965 - -0.2 770,965 - -2.1 770,965 - -2.5 770,965 - +0.2 770,965 - +0.2 770,966 + -1.3 770,980 + +0.2 770,980 + +1.6 770,980 + +0.2 770,980 + -2.4 770,980 + +1.8 770,980 + -0.1 770,981 - -0.7 770,981 - +1.4 770,981 - -2.0 770,981 - -0.9 770,981 - +0.8 770,981 - -1.0 770,994 + -1.1 770,994 + -0.1 770,994 + -0.3 770,994 + +0.2 770,995 - -1.1 770,995 - +0.1 770,995 - +0.8 771,025 + +1.0 771,026 - +0.6 771,036 + -0.9 771,036 + +0.2 771,036 + +0.4 771,036 + +2.1 771,036 + +0.2 771,036 + -1.2 771,036 + -0.6 771,037 - -1.4 771,037 - +0.7 771,037 - -0.8 771,037 - +0.8 771,037 - +0.3 771,037 - -0.1 771,037 - +1.0 771,037 - +0.6 771,037 - -0.9 771,037 - +0.6 771,037 - +2.0 771,037 - +0.8 771,037 - +1.2 771,046 + -0.2 771,047 - -1.1 771,049 - -1.7 771,049 - -1.1 771,093 + -1.8 771,094 - -0.1 771,207 + +0.2 771,207 + +1.7 771,207 + +0.4 771,208 - -0.4 771,208 - -0.2 771,209 + +1.8 771,209 + +0.6 771,209 + -0.7 771,209 + -0.2 771,209 + -0.5 771,209 + -0.3 771,210 - -0.8 771,210 - -0.0 771,210 - -0.4 771,288 - +0.4 771,288 - -0.8 771,397 + +1.1 771,397 + +0.3 771,397 + +0.1 771,397 + -0.9 771,398 - -1.1 771,398 - +0.2 771,438 + -0.1 771,438 + -1.3 771,438 + +0.2 771,453 + +0.3 771,522 + +1.6 771,599 + +0.2 771,600 - -1.6 771,600 - -1.3 771,625 - AO353_03615 0.14 -0.3 771,648 + AO353_03615 0.18 -1.5 771,649 - AO353_03615 0.18 +1.1 771,882 + AO353_03615 0.57 -1.1 771,883 - AO353_03615 0.57 -0.9 772,004 + AO353_03615 0.77 +0.8 772,145 + +0.3 772,145 + +0.2 772,145 + +0.6 772,145 + -0.8 772,145 + -1.5 772,146 - -1.5 772,146 - -2.1 772,146 - -2.2 772,146 - +0.2 772,146 - +1.8 772,146 - -1.1 772,146 - -0.9 772,146 - +1.2 772,164 - +1.2 772,239 + +1.3 772,240 - +0.4 772,502 + AO353_03625 0.13 -0.1 772,502 + AO353_03625 0.13 -0.1 772,503 - AO353_03625 0.14 -0.2 772,524 + AO353_03625 0.19 +1.2 772,524 + AO353_03625 0.19 +1.0 772,524 + AO353_03625 0.19 -0.3 772,525 - AO353_03625 0.19 -0.6 772,525 - AO353_03625 0.19 +0.4 772,525 - AO353_03625 0.19 +1.1 772,525 - AO353_03625 0.19 -1.1 772,582 + AO353_03625 0.32 -0.5 772,582 + AO353_03625 0.32 -0.8 772,583 - AO353_03625 0.32 +0.1 772,583 - AO353_03625 0.32 +0.7 772,583 - AO353_03625 0.32 +0.0 772,604 + AO353_03625 0.37 +1.8 772,604 + AO353_03625 0.37 +0.1 772,604 + AO353_03625 0.37 -0.4 772,604 + AO353_03625 0.37 +0.2 772,604 + AO353_03625 0.37 -0.1 772,605 - AO353_03625 0.38 -1.0 772,605 - AO353_03625 0.38 +0.2 772,605 - AO353_03625 0.38 -1.5 772,605 - AO353_03625 0.38 -1.5 772,605 - AO353_03625 0.38 -1.0 772,605 - AO353_03625 0.38 -1.4 772,605 - AO353_03625 0.38 -1.3 772,745 - AO353_03625 0.70 -0.4 772,780 - AO353_03625 0.79 -0.6 772,780 - AO353_03625 0.79 -1.9 772,811 + AO353_03625 0.86 +1.0 772,812 - AO353_03625 0.86 -0.7 772,859 + +0.6 772,859 + -1.2 772,860 - -1.0 772,861 - -0.9 772,926 - +0.3 772,935 + -0.8 772,936 - +0.8 772,936 - -0.3 772,936 - +0.8 772,937 + -2.6 772,937 + +2.6 772,937 + -2.4 772,937 + +0.5 772,937 + -0.1 772,937 + -1.2 772,937 + +0.6 772,937 + +0.2 772,937 + +0.4 772,937 + -1.5 772,937 + +0.2 772,937 + -1.1 772,938 - -0.2 772,938 - +0.6 772,938 - +0.5 772,938 - -1.6 772,938 - +0.3 772,938 - -0.4 772,938 - -0.3 772,938 - -0.2 772,938 - -0.9 772,938 - -0.8 772,938 - -1.8 772,938 - +0.2 772,938 - +0.6 772,939 + +1.9 772,939 + +1.2 772,939 + -0.3 772,940 - +0.3 772,940 - +0.2 772,940 - -0.6 772,940 - -0.9 772,940 - -0.1 772,940 - +1.2 772,940 - +0.2 772,940 - +0.5 772,940 - -0.4 772,940 - +0.6 772,990 + +0.0 773,019 - +0.1 773,119 + +0.6 773,119 + +1.5 773,119 + +1.6 773,119 + +0.4 773,119 + -0.8 773,120 - +0.6 773,120 - +0.2 773,120 - -0.2 773,120 - +0.6 773,131 + -0.4 773,131 + -0.1 773,131 + -0.8 773,131 + -0.3 773,131 + -1.0 773,131 + -1.5 773,131 + +2.6 773,132 - -2.1 773,132 - -0.1 773,132 - -0.1 773,132 - -0.5 773,132 - -1.2
Or see this region's nucleotide sequence