Strain Fitness in Pseudomonas fluorescens FW300-N2E3

Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_00060

Experiment: Nickel (II) chloride 0.625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG

download strain data

Per-strain Table

Position	Strand	LocusTag	Fraction	Nickel (II) chloride 0.625 mM
				remove
11,246	+			+0.1
11,246	+			+0.5
11,246	+			+0.1
11,246	+			-0.7
11,247	-			-0.8
11,247	-			-0.7
11,249	+			+0.4
11,249	+			-0.9
11,249	+			-0.6
11,249	+			-0.8
11,250	-			-0.4
11,250	-			-2.1
11,250	-			+1.1
11,267	+			+0.5
11,267	+			-1.9
11,268	-			-0.2
11,366	-	AO353_00055	0.18	-0.7
11,418	+	AO353_00055	0.24	-0.2
11,418	+	AO353_00055	0.24	+0.8
11,418	+	AO353_00055	0.24	-1.2
11,418	+	AO353_00055	0.24	+0.3
11,419	-	AO353_00055	0.24	-0.2
11,419	-	AO353_00055	0.24	-0.9
11,419	-	AO353_00055	0.24	-0.1
11,419	-	AO353_00055	0.24	-2.2
11,419	-			+0.4
11,419	-	AO353_00055	0.24	-0.2
11,449	+	AO353_00055	0.27	-0.2
11,449	+	AO353_00055	0.27	-1.7
11,450	-	AO353_00055	0.27	+0.1
11,459	-	AO353_00055	0.28	+0.6
11,459	-	AO353_00055	0.28	+0.3
11,464	+	AO353_00055	0.29	+0.8
11,464	+	AO353_00055	0.29	+1.0
11,465	-	AO353_00055	0.29	-0.5
11,494	+	AO353_00055	0.32	+0.4
11,494	+	AO353_00055	0.32	+1.3
11,494	+	AO353_00055	0.32	+0.5
11,494	+	AO353_00055	0.32	+1.1
11,495	-	AO353_00055	0.32	-1.4
11,495	-	AO353_00055	0.32	-0.4
11,495	-	AO353_00055	0.32	+0.5
11,495	-	AO353_00055	0.32	+0.4
11,495	-	AO353_00055	0.32	+0.4
11,495	-	AO353_00055	0.32	+0.6
11,495	-	AO353_00055	0.32	+0.9
11,495	-	AO353_00055	0.32	+0.6
11,495	-	AO353_00055	0.32	+0.2
11,500	+	AO353_00055	0.32	-0.9
11,500	+	AO353_00055	0.32	+0.4
11,500	+	AO353_00055	0.32	+0.1
11,500	+	AO353_00055	0.32	-1.0
11,500	+	AO353_00055	0.32	+0.1
11,500	+	AO353_00055	0.32	+0.4
11,500	+	AO353_00055	0.32	+0.7
11,500	+	AO353_00055	0.32	+1.3
11,501	-	AO353_00055	0.32	+0.8
11,501	-	AO353_00055	0.32	+0.1
11,501	-	AO353_00055	0.32	-1.7
11,501	-	AO353_00055	0.32	+0.5
11,501	-	AO353_00055	0.32	-1.2
11,501	-	AO353_00055	0.32	-0.6
11,503	-	AO353_00055	0.33	+0.0
11,503	-	AO353_00055	0.33	+0.8
11,595	+	AO353_00055	0.42	-0.4
11,595	+	AO353_00055	0.42	+0.2
11,595	+	AO353_00055	0.42	-0.2
11,595	+	AO353_00055	0.42	-0.1
11,596	-	AO353_00055	0.42	-1.5
11,596	-	AO353_00055	0.42	-0.3
11,596	-	AO353_00055	0.42	-0.5
11,596	-	AO353_00055	0.42	+0.6
11,608	+	AO353_00055	0.44	+0.3
11,608	+	AO353_00055	0.44	-1.4
11,608	+	AO353_00055	0.44	+0.2
11,653	+	AO353_00055	0.48	-0.7
11,653	+	AO353_00055	0.48	+1.0
11,653	+	AO353_00055	0.48	+0.4
11,653	+	AO353_00055	0.48	+1.1
11,653	+	AO353_00055	0.48	-0.1
11,653	+	AO353_00055	0.48	-0.4
11,653	+	AO353_00055	0.48	-1.9
11,654	-	AO353_00055	0.48	-0.9
11,654	-	AO353_00055	0.48	-0.7
11,654	-	AO353_00055	0.48	-0.6
11,654	-	AO353_00055	0.48	+0.5
11,654	-	AO353_00055	0.48	+0.1
11,654	-	AO353_00055	0.48	-0.8
11,654	-	AO353_00055	0.48	-0.6
11,654	-	AO353_00055	0.48	-0.6
11,654	-	AO353_00055	0.48	+0.7
11,654	-	AO353_00055	0.48	-1.3
11,654	-	AO353_00055	0.48	-1.3
11,654	-	AO353_00055	0.48	-0.8
11,654	-	AO353_00055	0.48	+0.9
11,674	+	AO353_00055	0.50	-0.4
11,674	+	AO353_00055	0.50	-0.7
11,674	+	AO353_00055	0.50	+0.8
11,674	+	AO353_00055	0.50	-1.5
11,674	+	AO353_00055	0.50	+1.4
11,675	-	AO353_00055	0.51	+0.3
11,675	-	AO353_00055	0.51	-0.9
11,675	-	AO353_00055	0.51	-0.9
11,675	-	AO353_00055	0.51	+1.1
11,675	-	AO353_00055	0.51	-0.1
11,716	+	AO353_00055	0.55	-0.0
11,717	-	AO353_00055	0.55	-1.6
11,776	+	AO353_00055	0.61	+1.2
11,776	+	AO353_00055	0.61	-0.7
11,777	-	AO353_00055	0.61	-0.9
11,777	-	AO353_00055	0.61	+0.2
11,777	-	AO353_00055	0.61	+0.1
11,777	-	AO353_00055	0.61	-0.5
11,777	-	AO353_00055	0.61	-1.6
11,777	-	AO353_00055	0.61	-0.7
11,777	-	AO353_00055	0.61	+0.6
11,800	+	AO353_00055	0.64	-0.1
11,800	+	AO353_00055	0.64	+0.1
11,800	+	AO353_00055	0.64	+0.4
11,819	-	AO353_00055	0.66	+0.9
11,851	+	AO353_00055	0.69	-0.7
11,852	-	AO353_00055	0.69	-1.3
11,852	-	AO353_00055	0.69	+0.6
11,852	-	AO353_00055	0.69	+1.0
11,896	+	AO353_00055	0.74	-0.6
11,896	+	AO353_00055	0.74	-0.9
11,896	+	AO353_00055	0.74	+0.9
11,896	+	AO353_00055	0.74	-1.8
11,896	+	AO353_00055	0.74	-0.8
11,897	-	AO353_00055	0.74	+0.6
11,897	-	AO353_00055	0.74	+0.8
11,897	-	AO353_00055	0.74	+0.8
11,897	-	AO353_00055	0.74	+0.2
11,897	-	AO353_00055	0.74	+0.3
11,897	-	AO353_00055	0.74	+0.9
11,897	-			+0.6
11,897	-	AO353_00055	0.74	-0.8
11,937	+	AO353_00055	0.78	+0.4
11,984	+	AO353_00055	0.83	-0.6
11,984	+	AO353_00055	0.83	+0.6
11,984	+	AO353_00055	0.83	-0.2
11,984	+			+0.1
11,984	+	AO353_00055	0.83	-1.5
11,984	+	AO353_00055	0.83	+1.1
11,984	+	AO353_00055	0.83	+1.1
11,984	+	AO353_00055	0.83	-0.3
11,984	+	AO353_00055	0.83	+0.8
11,985	-	AO353_00055	0.83	-0.6
11,985	-	AO353_00055	0.83	-1.3
11,985	-	AO353_00055	0.83	-0.4
11,985	-	AO353_00055	0.83	-1.4
11,985	-	AO353_00055	0.83	-0.0
11,985	-	AO353_00055	0.83	-1.1
11,985	-	AO353_00055	0.83	+0.1
11,985	-	AO353_00055	0.83	+0.1
11,985	-	AO353_00055	0.83	-0.8
11,985	-	AO353_00055	0.83	-0.1
11,985	-	AO353_00055	0.83	-0.2
11,985	-	AO353_00055	0.83	-1.1
11,985	-	AO353_00055	0.83	-1.0
11,992	+	AO353_00055	0.84	-1.3
11,992	+	AO353_00055	0.84	+0.1
12,118	+			-0.3
12,119	-			+0.4
12,119	-			-0.8
12,121	+			-1.2
12,121	+			+0.2
12,121	+			+0.4
12,121	+			-0.8
12,121	+			+1.3
12,121	+			+0.7
12,121	+			+0.9
12,121	+			-0.2
12,122	-			+2.4
12,122	-			+2.6
12,122	-			+0.0
12,122	-			+0.6
12,175	+			-0.3
12,175	+			+0.2
12,175	+			+0.1
12,175	+			+0.5
12,175	+			+0.6
12,175	+			+0.1
12,176	-			+0.5
12,176	-			-0.9
12,176	-			+0.4
12,176	-			-0.2
12,176	-			+0.1
12,176	-			-1.1
12,405	+	AO353_00060	0.21	-1.6
12,405	+	AO353_00060	0.21	+0.2
12,508	+	AO353_00060	0.31	+0.1
12,508	+	AO353_00060	0.31	-0.1
12,509	-	AO353_00060	0.31	-0.2
12,509	-	AO353_00060	0.31	-0.7
12,555	+	AO353_00060	0.35	-0.3
12,580	+	AO353_00060	0.38	-1.1
12,580	+	AO353_00060	0.38	+0.3
12,580	+	AO353_00060	0.38	-1.9
12,580	+	AO353_00060	0.38	-0.4
12,581	-	AO353_00060	0.38	-0.8
12,581	-	AO353_00060	0.38	+0.9
12,581	-	AO353_00060	0.38	-0.3
12,649	+	AO353_00060	0.44	+2.4
12,650	-	AO353_00060	0.44	-0.7
12,697	+	AO353_00060	0.49	+1.4
12,697	+	AO353_00060	0.49	-0.6
12,697	+	AO353_00060	0.49	-0.4
12,697	+	AO353_00060	0.49	-1.4
12,697	+	AO353_00060	0.49	-0.3
12,698	-	AO353_00060	0.49	-1.4
12,698	-	AO353_00060	0.49	-1.0
12,698	-	AO353_00060	0.49	+0.2
12,698	-	AO353_00060	0.49	+0.2
12,808	+	AO353_00060	0.60	-0.1
12,808	+	AO353_00060	0.60	-1.2
12,808	+	AO353_00060	0.60	-0.2
12,808	+	AO353_00060	0.60	+0.1
12,808	+	AO353_00060	0.60	-2.7
12,809	-	AO353_00060	0.60	-1.1
12,809	-	AO353_00060	0.60	-1.9
12,809	-	AO353_00060	0.60	+0.4
12,809	-	AO353_00060	0.60	-1.4
12,814	+	AO353_00060	0.60	-0.9
12,814	+	AO353_00060	0.60	-1.0
12,870	+	AO353_00060	0.66	-0.6
12,870	+	AO353_00060	0.66	-0.2
12,870	+	AO353_00060	0.66	+2.4
12,947	-	AO353_00060	0.73	-0.4
12,979	+	AO353_00060	0.76	-0.2
12,979	+	AO353_00060	0.76	+0.6
12,979	+	AO353_00060	0.76	+0.6
12,980	-	AO353_00060	0.76	-0.2
12,980	-	AO353_00060	0.76	+0.1
12,980	-			+0.1
12,980	-	AO353_00060	0.76	+0.6
12,980	-	AO353_00060	0.76	-0.8
12,980	-	AO353_00060	0.76	-0.6
12,980	-	AO353_00060	0.76	+1.4
12,980	-	AO353_00060	0.76	-0.2
13,079	-	AO353_00060	0.86	-1.9
13,105	+	AO353_00060	0.88	+0.6
13,105	+	AO353_00060	0.88	-1.2
13,106	-	AO353_00060	0.89	+0.6
13,223	-			-0.9
13,223	-			+0.6
13,269	+			+0.1
13,306	+			-0.8
13,312	+			+0.9
13,312	+			+0.2
13,313	-			-1.3
13,313	-			-0.6
13,313	-			+0.8
13,315	+			-0.9
13,316	-			-0.1
13,316	-			+1.0
13,316	-			-0.4
13,927	+	AO353_00065	0.55	+2.1
13,982	+	AO353_00065	0.61	+0.5
13,982	+	AO353_00065	0.61	-1.3
13,982	+	AO353_00065	0.61	+0.7
13,983	-			-0.4
14,063	+	AO353_00065	0.69	-0.2
14,063	+	AO353_00065	0.69	+0.4
14,063	+	AO353_00065	0.69	+0.4
14,064	-	AO353_00065	0.69	+0.5
14,064	-	AO353_00065	0.69	+0.2
14,199	-	AO353_00065	0.84	-0.6

Or see this region's nucleotide sequence