Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS24185

Experiment: R2A with Aluminum chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Aluminum chloride 1 mM
5,891,974	+		CA265_RS24180	0.74	+1.4
5,891,974	+		CA265_RS24180	0.74	+0.3
5,891,992	+		CA265_RS24180	0.74	+1.2
5,892,047	+		CA265_RS24180	0.76	-0.5
5,892,047	+		CA265_RS24180	0.76	+0.3
5,892,047	+		CA265_RS24180	0.76	+0.9
5,892,115	-		CA265_RS24180	0.78	+0.7
5,892,138	-		CA265_RS24180	0.79	+0.6
5,892,138	-		CA265_RS24180	0.79	+1.2
5,892,138	-		CA265_RS24180	0.79	+0.2
5,892,157	+		CA265_RS24180	0.79	+0.5
5,892,180	-		CA265_RS24180	0.80	+0.3
5,892,185	-		CA265_RS24180	0.80	+1.6
5,892,227	-		CA265_RS24180	0.82	-0.3
5,892,252	-		CA265_RS24180	0.82	+1.0
5,892,365	-		CA265_RS24180	0.86	+0.6
5,892,365	-		CA265_RS24180	0.86	+0.6
5,892,394	+		CA265_RS24180	0.87	+0.9
5,892,395	-		CA265_RS24180	0.87	+0.8
5,892,395	-		CA265_RS24180	0.87	-0.8
5,892,476	+		CA265_RS24180	0.89	-0.8
5,892,506	-				-0.6
5,892,539	-				+0.8
5,892,545	-				-0.8
5,892,548	+				-0.9
5,892,549	-				+0.5
5,892,673	+				-1.1
5,892,677	+				+1.6
5,892,680	+				+1.2
5,892,680	+				+1.1
5,892,681	-				+0.3
5,892,726	+				+0.4
5,892,731	+				+0.1
5,892,732	-				+0.3
5,892,732	-				+0.7
5,892,789	-				+0.8
5,892,795	-				+0.7
5,892,795	-				+1.4
5,892,804	-				+3.3
5,892,818	+				+1.0
5,892,819	-				+0.4
5,892,840	-				-1.1
5,892,923	+				+0.6
5,892,928	+				-0.8
5,892,975	-				-1.0
5,893,022	+				+1.7
5,893,060	+		CA265_RS24185	0.13	+0.0
5,893,060	+		CA265_RS24185	0.13	+2.0
5,893,061	-		CA265_RS24185	0.13	-0.1
5,893,061	-		CA265_RS24185	0.13	-1.0
5,893,061	-		CA265_RS24185	0.13	-0.5
5,893,067	-		CA265_RS24185	0.14	+0.2
5,893,120	+		CA265_RS24185	0.19	-0.5
5,893,121	-		CA265_RS24185	0.19	+1.6
5,893,160	-		CA265_RS24185	0.23	-1.1
5,893,176	+		CA265_RS24185	0.24	+0.3
5,893,177	-		CA265_RS24185	0.24	+1.7
5,893,289	-		CA265_RS24185	0.35	+0.4
5,893,406	+		CA265_RS24185	0.46	+0.6
5,893,474	+		CA265_RS24185	0.52	+0.5
5,893,486	+		CA265_RS24185	0.53	+1.2
5,893,490	-		CA265_RS24185	0.54	+0.6
5,893,552	+		CA265_RS24185	0.59	+0.2
5,893,623	-		CA265_RS24185	0.66	+0.4
5,893,636	-		CA265_RS24185	0.67	+0.3
5,893,731	+		CA265_RS24185	0.76	+1.4
5,893,731	+		CA265_RS24185	0.76	+0.4
5,893,732	-		CA265_RS24185	0.76	+0.9
5,893,764	-		CA265_RS24185	0.79	+0.5
5,893,771	+		CA265_RS24185	0.80	+0.6
5,893,772	-		CA265_RS24185	0.80	+0.5
5,893,919	+				+0.6
5,893,919	+				+0.2
5,893,926	+				+1.1
5,893,931	+				+0.5
5,893,932	-				+0.0
5,893,955	+				-0.5
5,893,955	+				+0.4
5,893,956	-				-0.1
5,893,969	+				+0.5
5,893,970	-				+0.9
5,893,970	-				-0.6
5,893,970	-				+0.8
5,893,989	-				+0.8
5,894,005	-				+0.6
5,894,027	-				+0.1
5,894,056	+				+1.1
5,894,069	+				+0.2
5,894,088	+				-0.5
5,894,088	+				+0.9
5,894,089	-				-1.5
5,894,089	-				-1.0
5,894,089	-				-0.2
5,894,163	-		CA265_RS24190	0.13	+0.2
5,894,177	-		CA265_RS24190	0.14	-0.7
5,894,212	+		CA265_RS24190	0.17	-1.6
5,894,213	-		CA265_RS24190	0.17	-0.3
5,894,224	+		CA265_RS24190	0.18	+1.2
5,894,363	-		CA265_RS24190	0.28	-1.4
5,894,447	+		CA265_RS24190	0.34	+0.4
5,894,448	-		CA265_RS24190	0.34	-0.6
5,894,492	-		CA265_RS24190	0.38	+0.4
5,894,496	-		CA265_RS24190	0.38	+1.2
5,894,580	+		CA265_RS24190	0.44	-0.7
5,894,584	+		CA265_RS24190	0.45	-0.2
5,894,585	-		CA265_RS24190	0.45	+0.0
5,894,595	+		CA265_RS24190	0.45	+0.7
5,894,595	+		CA265_RS24190	0.45	+0.0
5,894,729	-		CA265_RS24190	0.55	+0.7
5,894,739	+		CA265_RS24190	0.56	+0.5
5,894,768	-		CA265_RS24190	0.58	+0.9
5,894,812	-		CA265_RS24190	0.62	+0.1
5,894,829	+		CA265_RS24190	0.63	+0.5
5,894,874	-		CA265_RS24190	0.66	-0.2
5,894,874	-		CA265_RS24190	0.66	+0.6
5,894,874	-		CA265_RS24190	0.66	-0.6
5,894,922	+		CA265_RS24190	0.70	+0.6
5,894,930	+		CA265_RS24190	0.70	+1.2
5,894,930	+		CA265_RS24190	0.70	-1.2