Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS22815

Experiment: R2A with Aluminum chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Aluminum chloride 1 mM
5,580,468	+				-2.0
5,580,468	+				-1.6
5,580,469	-				-0.8
5,580,497	+				-1.3
5,580,498	-				-2.9
5,580,503	+				-2.5
5,580,554	-				+0.1
5,580,612	-		CA265_RS22810	0.10	-0.2
5,580,631	+		CA265_RS22810	0.12	-1.1
5,580,641	-		CA265_RS22810	0.13	+0.4
5,580,695	+		CA265_RS22810	0.19	-0.3
5,580,756	-		CA265_RS22810	0.26	+0.2
5,580,756	-		CA265_RS22810	0.26	+0.9
5,580,756	-		CA265_RS22810	0.26	+0.6
5,580,757	+		CA265_RS22810	0.26	-2.2
5,580,758	-		CA265_RS22810	0.26	+0.3
5,580,813	-		CA265_RS22810	0.33	+0.1
5,580,813	-		CA265_RS22810	0.33	+0.2
5,580,818	+		CA265_RS22810	0.33	+0.3
5,580,888	-		CA265_RS22810	0.41	-0.3
5,580,967	+		CA265_RS22810	0.50	-0.3
5,580,967	+		CA265_RS22810	0.50	-0.4
5,581,046	-		CA265_RS22810	0.59	-0.1
5,581,093	+		CA265_RS22810	0.64	-1.3
5,581,098	-		CA265_RS22810	0.64	+0.4
5,581,219	+		CA265_RS22810	0.78	-0.3
5,581,220	-		CA265_RS22810	0.78	+0.9
5,581,220	-		CA265_RS22810	0.78	+0.2
5,581,324	+		CA265_RS22810	0.90	-0.3
5,581,324	+		CA265_RS22810	0.90	+0.2
5,581,325	-		CA265_RS22810	0.90	-0.8
5,581,383	-				+0.8
5,581,426	-				+1.0
5,581,428	+				-0.3
5,581,447	-				-0.6
5,581,523	+				-0.1
5,581,550	-				-1.0
5,581,552	+				+1.0
5,581,590	+				-0.5
5,581,590	+				+0.4
5,581,636	+		CA265_RS22815	0.13	-0.9
5,581,638	+		CA265_RS22815	0.14	-0.3
5,581,639	-		CA265_RS22815	0.14	-0.8
5,581,639	-		CA265_RS22815	0.14	-0.5
5,581,639	-		CA265_RS22815	0.14	-0.1
5,581,659	-		CA265_RS22815	0.15	+0.1
5,581,671	-		CA265_RS22815	0.16	-0.8
5,581,754	-		CA265_RS22815	0.23	-0.8
5,581,766	-		CA265_RS22815	0.23	+0.3
5,581,810	+		CA265_RS22815	0.27	-0.6
5,581,919	-		CA265_RS22815	0.35	-0.7
5,581,930	+		CA265_RS22815	0.36	-0.6
5,581,931	-		CA265_RS22815	0.36	-2.8
5,581,942	-		CA265_RS22815	0.37	-0.7
5,581,942	-		CA265_RS22815	0.37	-2.7
5,581,942	-		CA265_RS22815	0.37	-0.5
5,581,990	+		CA265_RS22815	0.41	-0.6
5,581,991	-		CA265_RS22815	0.41	+1.4
5,581,991	-		CA265_RS22815	0.41	-0.3
5,582,014	-		CA265_RS22815	0.43	-0.9
5,582,047	+		CA265_RS22815	0.45	-0.1
5,582,050	+		CA265_RS22815	0.46	-0.8
5,582,051	-		CA265_RS22815	0.46	-0.6
5,582,058	+		CA265_RS22815	0.46	-2.0
5,582,059	-		CA265_RS22815	0.46	-0.9
5,582,097	-		CA265_RS22815	0.49	-0.4
5,582,097	-		CA265_RS22815	0.49	+1.5
5,582,242	+		CA265_RS22815	0.60	-2.8
5,582,259	+		CA265_RS22815	0.62	-0.5
5,582,350	+		CA265_RS22815	0.69	-0.7
5,582,355	-		CA265_RS22815	0.69	+0.7
5,582,362	+		CA265_RS22815	0.70	-1.1
5,582,362	+		CA265_RS22815	0.70	+0.1
5,582,362	+		CA265_RS22815	0.70	-1.6
5,582,363	-		CA265_RS22815	0.70	-0.7
5,582,378	+		CA265_RS22815	0.71	-1.8
5,582,384	-		CA265_RS22815	0.71	-1.2
5,582,386	+		CA265_RS22815	0.72	-1.2
5,582,421	-		CA265_RS22815	0.74	-0.1
5,582,421	-		CA265_RS22815	0.74	-0.4
5,582,463	+		CA265_RS22815	0.78	-1.7
5,582,463	+		CA265_RS22815	0.78	-0.1
5,582,464	-		CA265_RS22815	0.78	-0.8
5,582,470	-		CA265_RS22815	0.78	-0.6
5,582,470	-		CA265_RS22815	0.78	-1.6
5,582,486	-		CA265_RS22815	0.79	-0.9
5,582,507	+		CA265_RS22815	0.81	-1.0
5,582,536	+		CA265_RS22815	0.83	-2.9
5,582,673	-				-1.6
5,582,723	+				-1.9
5,582,974	-				-2.5
5,582,982	+				-2.4
5,583,036	+				-0.9
5,583,057	-				-0.1
5,583,131	-		CA265_RS22820	0.15	-0.6
5,583,151	-		CA265_RS22820	0.17	-0.1
5,583,285	-		CA265_RS22820	0.27	-3.0
5,583,298	-		CA265_RS22820	0.28	-3.8
5,583,315	+		CA265_RS22820	0.29	-2.0
5,583,384	+		CA265_RS22820	0.34	+0.3
5,583,424	+		CA265_RS22820	0.37	-1.7
5,583,445	+		CA265_RS22820	0.39	-0.9
5,583,555	+		CA265_RS22820	0.47	-3.1
5,583,561	-		CA265_RS22820	0.47	-2.2
5,583,619	+		CA265_RS22820	0.52	-3.8
5,583,635	+		CA265_RS22820	0.53	-1.2
5,583,710	-		CA265_RS22820	0.58	-0.5
5,583,712	+		CA265_RS22820	0.59	-1.8
5,583,716	+		CA265_RS22820	0.59	-2.5