Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS15385

Experiment: R2A with Aluminum chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Aluminum chloride 1 mM
3,870,361	+				+0.4
3,870,361	+				-1.0
3,870,362	-				-0.6
3,870,364	-				+0.2
3,870,413	-				-0.2
3,870,440	+				+0.3
3,870,441	-				+0.2
3,870,444	+				-0.6
3,870,444	+				-0.4
3,870,445	-				+0.5
3,870,445	-				-0.3
3,870,534	-		CA265_RS15380	0.10	+0.4
3,870,544	-		CA265_RS15380	0.11	+0.7
3,870,586	-		CA265_RS15380	0.16	-0.2
3,870,586	-		CA265_RS15380	0.16	+0.1
3,870,621	-		CA265_RS15380	0.20	+0.1
3,870,626	+		CA265_RS15380	0.20	-0.7
3,870,736	-		CA265_RS15380	0.33	+0.4
3,870,806	-		CA265_RS15380	0.41	-0.5
3,870,959	+		CA265_RS15380	0.58	+1.1
3,870,959	+		CA265_RS15380	0.58	+0.6
3,870,960	-		CA265_RS15380	0.58	+0.1
3,871,004	-		CA265_RS15380	0.63	+0.5
3,871,073	+		CA265_RS15380	0.70	+1.0
3,871,076	-		CA265_RS15380	0.71	-1.4
3,871,084	+		CA265_RS15380	0.72	-1.0
3,871,142	-		CA265_RS15380	0.78	+1.9
3,871,142	-		CA265_RS15380	0.78	-0.2
3,871,188	-		CA265_RS15380	0.83	+0.7
3,871,205	+		CA265_RS15380	0.85	+0.8
3,871,205	+		CA265_RS15380	0.85	+1.2
3,871,206	-		CA265_RS15380	0.85	-0.9
3,871,249	-				+0.2
3,871,305	-				-0.4
3,871,348	-				-0.4
3,871,348	-				-0.6
3,871,348	-				+1.6
3,871,348	-				-0.0
3,871,348	-				+0.2
3,871,348	-				+0.1
3,871,353	-				-0.2
3,871,374	-				-0.0
3,871,463	-		CA265_RS15385	0.13	+0.1
3,871,514	+		CA265_RS15385	0.19	-0.3
3,871,518	+		CA265_RS15385	0.19	+0.5
3,871,581	-		CA265_RS15385	0.27	-0.7
3,871,622	+		CA265_RS15385	0.31	+1.6
3,871,658	-		CA265_RS15385	0.35	+1.1
3,871,685	+		CA265_RS15385	0.38	+0.2
3,871,730	+		CA265_RS15385	0.44	+1.1
3,871,745	+		CA265_RS15385	0.45	-1.1
3,871,950	-		CA265_RS15385	0.69	-1.6
3,871,962	-		CA265_RS15385	0.70	+0.6
3,872,028	+		CA265_RS15385	0.78	+0.5
3,872,040	+		CA265_RS15385	0.79	-1.2
3,872,069	+		CA265_RS15385	0.82	+0.6
3,872,083	-		CA265_RS15385	0.84	-0.8
3,872,203	-				-0.4
3,872,206	-				-0.1
3,872,328	+		CA265_RS15390	0.11	-0.9
3,872,337	-		CA265_RS15390	0.12	-0.8
3,872,344	+		CA265_RS15390	0.13	+2.6
3,872,345	-		CA265_RS15390	0.13	+0.8
3,872,345	-		CA265_RS15390	0.13	-0.1
3,872,413	-		CA265_RS15390	0.21	-0.3
3,872,421	-		CA265_RS15390	0.22	-1.2
3,872,630	+		CA265_RS15390	0.46	-0.1
3,872,631	-		CA265_RS15390	0.46	+0.1
3,872,635	-		CA265_RS15390	0.46	+0.5
3,872,679	+		CA265_RS15390	0.51	-0.1
3,872,683	-		CA265_RS15390	0.52	+0.4
3,872,683	-		CA265_RS15390	0.52	+1.0
3,872,783	-		CA265_RS15390	0.63	+0.1
3,872,838	-		CA265_RS15390	0.70	+1.6
3,872,840	+		CA265_RS15390	0.70	+1.2
3,872,841	-		CA265_RS15390	0.70	+0.1
3,872,861	+		CA265_RS15390	0.72	-0.6
3,872,913	+		CA265_RS15390	0.78	-0.4
3,872,913	+		CA265_RS15390	0.78	+0.1
3,873,003	+		CA265_RS15390	0.89	+0.7
3,873,004	-		CA265_RS15390	0.89	+0.7
3,873,037	+				+0.7
3,873,091	-				+1.3
3,873,091	-				-1.0