Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS10620

Experiment: R2A with Aluminum chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Aluminum chloride 1 mM
2,623,874	+		CA265_RS10610	0.24	+0.4
2,623,875	-		CA265_RS10610	0.24	+2.1
2,623,875	-		CA265_RS10610	0.24	+1.9
2,623,876	+		CA265_RS10610	0.24	-0.0
2,623,877	-		CA265_RS10610	0.24	+1.6
2,623,877	-		CA265_RS10610	0.24	+1.8
2,623,877	-				+3.9
2,623,880	+		CA265_RS10610	0.25	+0.6
2,623,881	-		CA265_RS10610	0.25	+1.9
2,623,915	+		CA265_RS10610	0.32	-0.2
2,623,916	-		CA265_RS10610	0.32	+2.4
2,623,916	-		CA265_RS10610	0.32	+1.8
2,623,933	-		CA265_RS10610	0.35	+1.7
2,623,959	+		CA265_RS10610	0.40	+0.0
2,624,004	+		CA265_RS10610	0.48	-0.4
2,624,005	-		CA265_RS10610	0.49	-0.3
2,624,030	-		CA265_RS10610	0.53	+1.0
2,624,038	+		CA265_RS10610	0.55	-0.2
2,624,039	-		CA265_RS10610	0.55	+0.3
2,624,050	-		CA265_RS10610	0.57	+0.6
2,624,110	-		CA265_RS10610	0.69	+0.7
2,624,158	+		CA265_RS10610	0.78	+0.1
2,624,159	-		CA265_RS10610	0.78	-0.1
2,624,162	+		CA265_RS10610	0.78	-1.0
2,624,194	+		CA265_RS10610	0.84	-0.3
2,624,195	-		CA265_RS10610	0.85	+0.7
2,624,221	+		CA265_RS10610	0.90	+0.7
2,624,293	+				-0.6
2,624,294	-				+0.9
2,624,362	+		CA265_RS10615	0.26	+0.2
2,624,377	-		CA265_RS10615	0.30	+0.5
2,624,432	+		CA265_RS10615	0.45	-0.1
2,624,435	+		CA265_RS10615	0.46	+1.0
2,624,438	-		CA265_RS10615	0.47	+1.1
2,624,457	-		CA265_RS10615	0.52	+0.6
2,624,513	+		CA265_RS10615	0.67	-0.7
2,624,587	-		CA265_RS10615	0.87	-0.1
2,624,612	-				+0.7
2,624,654	+				+0.3
2,624,654	+				+0.1
2,624,655	-				-0.1
2,624,707	+				+0.1
2,624,714	+				-0.5
2,624,752	-				+0.3
2,625,019	-		CA265_RS10620	0.48	+0.0
2,625,052	-		CA265_RS10620	0.53	-0.3
2,625,078	+		CA265_RS10620	0.58	-1.6
2,625,079	-		CA265_RS10620	0.58	+0.3
2,625,079	-		CA265_RS10620	0.58	+0.3
2,625,081	-		CA265_RS10620	0.58	+0.7
2,625,126	+		CA265_RS10620	0.66	+1.0
2,625,167	-		CA265_RS10620	0.73	+0.1
2,625,184	+		CA265_RS10620	0.75	+0.6
2,625,187	-		CA265_RS10620	0.76	+0.0
2,625,289	-				-1.3
2,625,307	+				-0.1
2,625,312	+				+0.5
2,625,313	-				+0.2
2,625,315	-				-0.0
2,625,333	-				+0.4
2,625,364	+				+1.0
2,625,392	-				-1.6
2,625,450	+				+1.0
2,625,478	-				+0.1
2,625,478	-				+0.5
2,625,525	-				+1.9
2,625,538	+				-0.1
2,625,540	+				-0.1
2,625,541	-				-0.4
2,625,568	-				-0.2
2,625,699	+		CA265_RS10625	0.16	-0.2
2,625,753	-		CA265_RS10625	0.19	-0.0
2,625,839	-		CA265_RS10625	0.23	-0.2
2,625,851	+		CA265_RS10625	0.24	+0.2
2,625,869	+		CA265_RS10625	0.25	-0.7
2,625,869	+		CA265_RS10625	0.25	+0.9
2,625,874	+		CA265_RS10625	0.25	+0.3
2,625,897	+		CA265_RS10625	0.27	+0.3
2,625,923	-		CA265_RS10625	0.28	-0.2
2,625,997	+		CA265_RS10625	0.32	-0.2
2,625,997	+		CA265_RS10625	0.32	+0.5
2,626,008	-		CA265_RS10625	0.32	+0.1
2,626,023	-		CA265_RS10625	0.33	+0.3
2,626,023	-		CA265_RS10625	0.33	-0.3
2,626,183	+		CA265_RS10625	0.41	+0.6
2,626,183	+		CA265_RS10625	0.41	-0.4
2,626,310	+		CA265_RS10625	0.48	-0.5
2,626,316	+		CA265_RS10625	0.48	+0.3
2,626,329	+		CA265_RS10625	0.49	-0.1
2,626,329	+		CA265_RS10625	0.49	+0.7
2,626,330	-		CA265_RS10625	0.49	+0.7
2,626,330	-		CA265_RS10625	0.49	+0.4