Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS05875

Experiment: R2A with Aluminum chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Aluminum chloride 1 mM
1,441,289	-		CA265_RS05870	0.58	-1.8
1,441,289	-		CA265_RS05870	0.58	-3.0
1,441,301	-		CA265_RS05870	0.59	-3.3
1,441,303	-		CA265_RS05870	0.59	-2.3
1,441,307	-		CA265_RS05870	0.59	-1.2
1,441,386	+		CA265_RS05870	0.63	-2.1
1,441,463	+		CA265_RS05870	0.67	-2.2
1,441,463	+		CA265_RS05870	0.67	-4.8
1,441,463	+		CA265_RS05870	0.67	-4.0
1,441,463	+		CA265_RS05870	0.67	-0.6
1,441,464	-		CA265_RS05870	0.67	-3.0
1,441,467	+		CA265_RS05870	0.67	-2.6
1,441,512	+		CA265_RS05870	0.70	-3.3
1,441,516	+		CA265_RS05870	0.70	-2.5
1,441,517	-		CA265_RS05870	0.70	-3.5
1,441,532	+		CA265_RS05870	0.71	-1.9
1,441,533	-		CA265_RS05870	0.71	-1.5
1,441,538	+		CA265_RS05870	0.71	-3.6
1,441,586	-		CA265_RS05870	0.73	-2.8
1,441,586	-		CA265_RS05870	0.73	-2.7
1,441,614	+		CA265_RS05870	0.75	-4.0
1,441,636	+		CA265_RS05870	0.76	-2.7
1,441,651	+		CA265_RS05870	0.77	-0.6
1,441,655	-				+0.4
1,441,655	-		CA265_RS05870	0.77	-3.7
1,441,702	+		CA265_RS05870	0.79	-2.6
1,441,702	+		CA265_RS05870	0.79	-3.8
1,441,702	+		CA265_RS05870	0.79	-2.9
1,441,704	+		CA265_RS05870	0.79	-3.7
1,441,704	+		CA265_RS05870	0.79	-2.8
1,441,733	-		CA265_RS05870	0.81	-1.9
1,441,787	+		CA265_RS05870	0.84	-2.8
1,441,823	+		CA265_RS05870	0.86	-1.8
1,441,823	+		CA265_RS05870	0.86	-3.7
1,441,827	-		CA265_RS05870	0.86	-2.2
1,441,849	-		CA265_RS05870	0.87	-2.4
1,441,871	+		CA265_RS05870	0.88	-3.3
1,441,871	+		CA265_RS05870	0.88	-3.0
1,441,871	+		CA265_RS05870	0.88	-2.2
1,441,946	-				-4.2
1,441,975	+				-4.5
1,441,976	-				-4.0
1,441,986	+				-2.6
1,441,986	+				-3.4
1,441,995	-				-3.6
1,442,009	-				-2.7
1,442,030	+				-4.1
1,442,063	-				-3.0
1,442,092	+				-2.5
1,442,165	+				-4.2
1,442,230	+				-0.9
1,442,245	+				-1.5
1,442,313	-				-3.0
1,442,319	+				-2.2
1,442,322	+				-3.6
1,442,323	-				-3.7
1,442,325	+				-3.5
1,442,370	+				-2.9
1,442,371	-				-3.6
1,442,481	+				-3.6
1,442,571	+		CA265_RS05875	0.13	-3.8
1,442,572	-		CA265_RS05875	0.13	-2.4
1,442,572	-		CA265_RS05875	0.13	-1.9
1,442,572	-		CA265_RS05875	0.13	-3.5
1,442,591	+		CA265_RS05875	0.13	-0.2
1,442,591	+		CA265_RS05875	0.13	-3.7
1,442,591	+		CA265_RS05875	0.13	-4.8
1,442,592	-		CA265_RS05875	0.13	-3.9
1,442,594	-		CA265_RS05875	0.14	-2.5
1,442,648	+		CA265_RS05875	0.16	-6.0
1,442,649	-		CA265_RS05875	0.16	-2.6
1,442,650	+		CA265_RS05875	0.16	-3.3
1,442,650	+		CA265_RS05875	0.16	-2.5
1,442,651	-		CA265_RS05875	0.16	-1.8
1,442,662	+		CA265_RS05875	0.16	-4.3
1,442,752	-		CA265_RS05875	0.20	-4.5
1,442,753	+		CA265_RS05875	0.20	-2.8
1,442,753	+		CA265_RS05875	0.20	-1.5
1,442,754	-		CA265_RS05875	0.20	-4.0
1,442,755	+		CA265_RS05875	0.20	-3.3
1,442,755	+		CA265_RS05875	0.20	-3.7
1,442,755	+		CA265_RS05875	0.20	-1.8
1,442,755	+		CA265_RS05875	0.20	-5.1
1,442,756	-		CA265_RS05875	0.20	-3.3
1,442,756	-		CA265_RS05875	0.20	-3.7
1,442,805	+		CA265_RS05875	0.22	-3.4
1,442,806	-		CA265_RS05875	0.22	-2.8
1,442,866	+		CA265_RS05875	0.25	-3.0
1,442,872	+		CA265_RS05875	0.25	-3.6
1,442,936	+		CA265_RS05875	0.28	-2.4
1,442,936	+		CA265_RS05875	0.28	-2.9
1,442,977	+		CA265_RS05875	0.29	-4.2
1,443,078	+		CA265_RS05875	0.33	-2.4
1,443,079	-		CA265_RS05875	0.34	-4.4
1,443,081	-		CA265_RS05875	0.34	-1.8
1,443,084	+		CA265_RS05875	0.34	-2.1
1,443,087	+		CA265_RS05875	0.34	-1.8
1,443,119	-		CA265_RS05875	0.35	-1.4
1,443,122	+		CA265_RS05875	0.35	-3.5
1,443,156	+		CA265_RS05875	0.37	-2.5
1,443,173	+		CA265_RS05875	0.37	-2.1
1,443,174	-		CA265_RS05875	0.37	-2.9
1,443,184	+		CA265_RS05875	0.38	-3.2
1,443,184	+		CA265_RS05875	0.38	-2.1
1,443,335	-		CA265_RS05875	0.44	-3.7
1,443,373	+		CA265_RS05875	0.46	-4.0
1,443,412	-		CA265_RS05875	0.47	-3.3
1,443,412	-		CA265_RS05875	0.47	-2.1
1,443,418	-		CA265_RS05875	0.48	-3.8
1,443,455	+		CA265_RS05875	0.49	-3.8
1,443,499	-		CA265_RS05875	0.51	-2.7
1,443,508	+		CA265_RS05875	0.51	-3.6
1,443,522	+		CA265_RS05875	0.52	-3.8
1,443,594	-		CA265_RS05875	0.55	-4.2
1,443,675	-		CA265_RS05875	0.58	-4.5
1,443,755	+		CA265_RS05875	0.61	-1.8
1,443,756	-		CA265_RS05875	0.61	-2.1
1,443,784	+		CA265_RS05875	0.63	-2.2
1,443,801	+		CA265_RS05875	0.63	-2.6
1,443,826	+		CA265_RS05875	0.64	-3.2
1,443,827	-		CA265_RS05875	0.64	-2.2
1,443,847	+		CA265_RS05875	0.65	-1.6
1,443,900	+		CA265_RS05875	0.67	-3.2
1,443,919	+		CA265_RS05875	0.68	-3.6
1,443,942	+		CA265_RS05875	0.69	-3.4
1,443,942	+		CA265_RS05875	0.69	-2.7
1,443,964	-		CA265_RS05875	0.70	-3.5
1,443,990	-		CA265_RS05875	0.71	-2.5
1,443,994	-		CA265_RS05875	0.71	-3.1
1,444,006	-		CA265_RS05875	0.72	-2.8
1,444,057	+		CA265_RS05875	0.74	-0.8
1,444,084	-		CA265_RS05875	0.75	-0.9
1,444,168	+		CA265_RS05875	0.78	-1.6
1,444,189	+		CA265_RS05875	0.79	-3.0
1,444,448	+				-3.5
1,444,448	+				-4.6
1,444,470	+				-3.1
1,444,507	+				+0.4
1,444,508	-				-2.5
1,444,553	+				-1.6
1,444,554	-				-3.2
1,444,554	-				-3.5
1,444,669	+				-4.4
1,444,699	-				-1.9
1,444,704	+				-3.7
1,444,750	+				+0.6
1,444,750	+				+0.2
1,444,764	+				-0.2
1,444,770	+				+0.1
1,444,770	+				+0.3
1,444,780	+				+0.8
1,444,817	+				+1.3
1,444,825	+				+0.5
1,444,863	+				+1.6
1,444,873	-				+3.0
1,444,900	-				+2.1
1,444,913	+				-1.8
1,444,916	+				+0.2
1,444,969	+				-0.2
1,444,969	+				-2.7
1,444,970	-				+1.7
1,444,970	-				+1.1
1,444,973	-				+2.3
1,444,977	+				-1.4
1,444,978	-				+1.9
1,444,997	+		CA265_RS05880	0.11	-3.0
1,445,007	+		CA265_RS05880	0.12	-4.5
1,445,049	+		CA265_RS05880	0.19	-2.7
1,445,121	-		CA265_RS05880	0.29	+1.0
1,445,153	+		CA265_RS05880	0.34	-2.6
1,445,214	+		CA265_RS05880	0.43	-2.5
1,445,246	+		CA265_RS05880	0.48	-0.9
1,445,295	-		CA265_RS05880	0.55	-1.9
1,445,323	+		CA265_RS05880	0.59	-3.8
1,445,324	-		CA265_RS05880	0.59	-3.9
1,445,425	+		CA265_RS05880	0.74	-2.6
1,445,425	+		CA265_RS05880	0.74	-2.4
1,445,426	-		CA265_RS05880	0.74	-4.4
1,445,426	-		CA265_RS05880	0.74	-3.8
1,445,496	-		CA265_RS05880	0.85	-1.1
1,445,575	+				-3.9
1,445,576	-				-1.9
1,445,594	+				-1.7
1,445,595	-				-3.1
1,445,597	-				-3.4
1,445,597	-				-0.9
1,445,597	-				-2.5
1,445,641	+				-1.6
1,445,641	+				-2.0
1,445,641	+				-2.1
1,445,652	+				-3.2
1,445,653	-				-2.6
1,445,676	-				-3.8