Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS04765

Experiment: R2A with Aluminum chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Aluminum chloride 1 mM
1,132,310	+				+0.4
1,132,427	-				+0.7
1,132,485	+		CA265_RS04760	0.16	+0.4
1,132,500	-		CA265_RS04760	0.17	+1.5
1,132,500	-		CA265_RS04760	0.17	-2.4
1,132,545	+		CA265_RS04760	0.22	+0.4
1,132,554	+		CA265_RS04760	0.23	+0.7
1,132,602	+		CA265_RS04760	0.28	+2.6
1,132,607	+		CA265_RS04760	0.29	-0.6
1,132,626	-		CA265_RS04760	0.31	+0.3
1,132,645	-		CA265_RS04760	0.33	+1.1
1,132,682	+		CA265_RS04760	0.37	+0.6
1,132,765	+		CA265_RS04760	0.45	+1.0
1,132,770	-		CA265_RS04760	0.46	+0.1
1,132,777	+		CA265_RS04760	0.47	+1.7
1,132,778	-		CA265_RS04760	0.47	+0.5
1,132,827	+		CA265_RS04760	0.52	+0.4
1,132,910	+		CA265_RS04760	0.61	+0.6
1,132,997	+		CA265_RS04760	0.70	+1.3
1,132,997	+		CA265_RS04760	0.70	+1.4
1,133,109	+		CA265_RS04760	0.82	+0.7
1,133,110	-		CA265_RS04760	0.82	+0.8
1,133,145	-		CA265_RS04760	0.86	+1.1
1,133,163	-		CA265_RS04760	0.88	+0.6
1,133,213	+				+1.2
1,133,213	+				+0.9
1,133,279	+				+0.8
1,133,279	+				+0.7
1,133,295	+				+0.8
1,133,307	+				+0.7
1,133,314	+				-0.8
1,133,358	-				+0.4
1,133,430	-		CA265_RS04765	0.11	-1.6
1,133,430	-		CA265_RS04765	0.11	+0.2
1,133,468	+		CA265_RS04765	0.15	+1.2
1,133,489	+		CA265_RS04765	0.17	+0.7
1,133,509	+		CA265_RS04765	0.18	+0.0
1,133,510	-		CA265_RS04765	0.19	+0.7
1,133,616	-		CA265_RS04765	0.28	+0.3
1,133,628	-		CA265_RS04765	0.29	+2.6
1,133,628	-		CA265_RS04765	0.29	+0.4
1,133,726	-		CA265_RS04765	0.38	+1.4
1,133,727	+		CA265_RS04765	0.38	+0.1
1,133,821	-		CA265_RS04765	0.47	-0.2
1,133,821	-		CA265_RS04765	0.47	+0.2
1,134,025	+		CA265_RS04765	0.65	-0.2
1,134,026	-		CA265_RS04765	0.65	+0.2
1,134,027	+		CA265_RS04765	0.65	+0.3
1,134,048	+		CA265_RS04765	0.67	+0.9
1,134,144	-		CA265_RS04765	0.76	+0.6
1,134,189	-		CA265_RS04765	0.80	+0.7
1,134,206	+		CA265_RS04765	0.82	+0.9
1,134,206	+		CA265_RS04765	0.82	+0.6
1,134,207	-		CA265_RS04765	0.82	+0.5
1,134,225	-		CA265_RS04765	0.83	+0.8
1,134,280	+		CA265_RS04765	0.88	+0.7
1,134,280	+		CA265_RS04765	0.88	+1.0
1,134,342	+				+0.3
1,134,342	+				-0.0
1,134,342	+				-1.4
1,134,343	-				+0.4
1,134,343	-				+1.4
1,134,360	-				+0.2
1,134,374	+				-0.9
1,134,375	-				+0.2
1,134,401	-				+0.3
1,134,448	+				+1.1
1,134,535	-				+0.1
1,134,545	-				-0.3
1,134,637	-				+0.9
1,134,681	+				-1.0
1,134,801	-		CA265_RS04770	0.12	+1.0
1,134,811	+		CA265_RS04770	0.12	+0.9
1,134,811	+		CA265_RS04770	0.12	+1.0
1,134,811	+		CA265_RS04770	0.12	+0.3
1,134,812	-		CA265_RS04770	0.12	+0.2
1,134,812	-		CA265_RS04770	0.12	+0.3
1,134,812	-		CA265_RS04770	0.12	-1.0
1,134,964	-				+1.4
1,134,975	+		CA265_RS04770	0.17	+1.1
1,134,980	+		CA265_RS04770	0.17	+0.0
1,134,985	-		CA265_RS04770	0.17	-0.2
1,134,985	-		CA265_RS04770	0.17	+0.6
1,135,008	+		CA265_RS04770	0.18	+0.9
1,135,030	-		CA265_RS04770	0.19	-0.4
1,135,030	-		CA265_RS04770	0.19	-0.2
1,135,105	+		CA265_RS04770	0.21	+0.5
1,135,142	+		CA265_RS04770	0.22	-0.1
1,135,169	+		CA265_RS04770	0.23	+0.4
1,135,250	+		CA265_RS04770	0.25	-0.2
1,135,251	-		CA265_RS04770	0.25	+0.6
1,135,365	-		CA265_RS04770	0.29	+0.6