Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_1295

Experiment: propionate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_1294 and Ac3H11_1295 are separated by 108 nucleotidesAc3H11_1295 and Ac3H11_1296 are separated by 20 nucleotides Ac3H11_1294 - 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100), at 109,833 to 110,744 _1294 Ac3H11_1295 - hypothetical protein, at 110,853 to 111,386 _1295 Ac3H11_1296 - FIG00794195: hypothetical protein, at 111,407 to 112,180 _1296 Position (kb) 110 111 112Strain fitness (log2 ratio) -1 0 1 2at 109.888 kb on - strandat 110.193 kb on + strand, within Ac3H11_1294at 110.193 kb on + strand, within Ac3H11_1294at 110.194 kb on - strand, within Ac3H11_1294at 110.194 kb on - strand, within Ac3H11_1294at 110.194 kb on - strand, within Ac3H11_1294at 110.194 kb on - strand, within Ac3H11_1294at 110.194 kb on - strand, within Ac3H11_1294at 110.325 kb on + strand, within Ac3H11_1294at 110.326 kb on - strand, within Ac3H11_1294at 110.326 kb on - strand, within Ac3H11_1294at 110.422 kb on - strand, within Ac3H11_1294at 110.484 kb on + strand, within Ac3H11_1294at 110.746 kb on + strandat 110.769 kb on + strandat 110.770 kb on - strandat 111.103 kb on + strand, within Ac3H11_1295at 111.103 kb on + strand, within Ac3H11_1295at 111.104 kb on - strand, within Ac3H11_1295at 111.104 kb on - strand, within Ac3H11_1295at 111.392 kb on + strandat 111.393 kb on - strandat 111.630 kb on + strand, within Ac3H11_1296at 111.631 kb on - strand, within Ac3H11_1296at 111.906 kb on + strand, within Ac3H11_1296at 111.906 kb on + strand, within Ac3H11_1296at 111.907 kb on - strand, within Ac3H11_1296at 112.092 kb on + strand, within Ac3H11_1296at 112.093 kb on - strand, within Ac3H11_1296at 112.093 kb on - strand, within Ac3H11_1296at 112.093 kb on - strand, within Ac3H11_1296at 112.242 kb on - strandat 112.242 kb on - strandat 112.253 kb on + strandat 112.253 kb on + strandat 112.254 kb on - strandat 112.262 kb on + strandat 112.263 kb on - strandat 112.263 kb on - strandat 112.348 kb on + strandat 112.357 kb on + strandat 112.358 kb on - strandat 112.367 kb on - strandat 112.367 kb on - strandat 112.376 kb on - strandat 112.376 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction propionate (C)
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109,888 - -0.2
110,193 + Ac3H11_1294 0.39 +0.1
110,193 + Ac3H11_1294 0.39 +0.3
110,194 - Ac3H11_1294 0.40 -1.0
110,194 - Ac3H11_1294 0.40 +1.4
110,194 - Ac3H11_1294 0.40 -0.5
110,194 - Ac3H11_1294 0.40 +0.2
110,194 - Ac3H11_1294 0.40 -0.9
110,325 + Ac3H11_1294 0.54 +0.0
110,326 - Ac3H11_1294 0.54 +0.2
110,326 - Ac3H11_1294 0.54 -1.0
110,422 - Ac3H11_1294 0.65 -1.2
110,484 + Ac3H11_1294 0.71 -1.0
110,746 + +0.1
110,769 + +0.2
110,770 - +2.3
111,103 + Ac3H11_1295 0.47 -0.4
111,103 + Ac3H11_1295 0.47 -0.3
111,104 - Ac3H11_1295 0.47 +0.4
111,104 - Ac3H11_1295 0.47 -0.4
111,392 + -0.4
111,393 - -1.6
111,630 + Ac3H11_1296 0.29 +0.6
111,631 - Ac3H11_1296 0.29 +0.9
111,906 + Ac3H11_1296 0.64 -0.6
111,906 + Ac3H11_1296 0.64 -0.1
111,907 - Ac3H11_1296 0.65 +1.5
112,092 + Ac3H11_1296 0.89 +0.2
112,093 - Ac3H11_1296 0.89 +0.1
112,093 - Ac3H11_1296 0.89 +0.0
112,093 - Ac3H11_1296 0.89 +1.0
112,242 - -0.0
112,242 - +0.4
112,253 + +0.6
112,253 + +0.6
112,254 - -0.0
112,262 + +0.2
112,263 - +1.3
112,263 - +0.2
112,348 + -1.2
112,357 + -0.9
112,358 - -0.9
112,367 - -0.7
112,367 - +0.7
112,376 - -0.1
112,376 - -0.1

Or see this region's nucleotide sequence