Experiment: Paraquat dichloride 0.032 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_21690 and AO353_21695 are separated by 77 nucleotides AO353_21695 and AO353_21700 are separated by 77 nucleotides AO353_21700 and AO353_21705 are separated by 172 nucleotides
AO353_21690: AO353_21690 - 2,4-dienoyl-CoA reductase, at 4,757,258 to 4,758,481
_21690
AO353_21695: AO353_21695 - MerR family transcriptional regulator, at 4,758,559 to 4,758,966
_21695
AO353_21700: AO353_21700 - thioredoxin, at 4,759,044 to 4,759,466
_21700
AO353_21705: AO353_21705 - hypothetical protein, at 4,759,639 to 4,760,052
_21705
Position (kb)
4758
4759 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4757.643 kb on + strand, within AO353_21690 at 4757.643 kb on + strand, within AO353_21690 at 4757.644 kb on - strand, within AO353_21690 at 4757.644 kb on - strand, within AO353_21690 at 4757.644 kb on - strand, within AO353_21690 at 4757.703 kb on + strand, within AO353_21690 at 4757.703 kb on + strand, within AO353_21690 at 4757.703 kb on + strand, within AO353_21690 at 4757.703 kb on + strand, within AO353_21690 at 4757.703 kb on + strand, within AO353_21690 at 4757.703 kb on + strand, within AO353_21690 at 4757.703 kb on + strand, within AO353_21690 at 4757.703 kb on + strand, within AO353_21690 at 4757.704 kb on - strand, within AO353_21690 at 4757.704 kb on - strand, within AO353_21690 at 4757.961 kb on + strand, within AO353_21690 at 4757.962 kb on - strand, within AO353_21690 at 4757.962 kb on - strand, within AO353_21690 at 4758.266 kb on + strand, within AO353_21690 at 4758.267 kb on - strand, within AO353_21690 at 4758.267 kb on - strand, within AO353_21690 at 4758.267 kb on - strand, within AO353_21690 at 4758.267 kb on - strand, within AO353_21690 at 4758.267 kb on - strand, within AO353_21690 at 4758.267 kb on - strand, within AO353_21690 at 4758.305 kb on + strand, within AO353_21690 at 4758.305 kb on + strand, within AO353_21690 at 4758.305 kb on + strand, within AO353_21690 at 4758.305 kb on + strand, within AO353_21690 at 4758.305 kb on + strand, within AO353_21690 at 4758.306 kb on - strand, within AO353_21690 at 4758.306 kb on - strand, within AO353_21690 at 4758.306 kb on - strand, within AO353_21690 at 4758.306 kb on - strand, within AO353_21690 at 4758.306 kb on - strand, within AO353_21690 at 4758.496 kb on + strand at 4758.497 kb on - strand at 4758.513 kb on + strand at 4758.519 kb on + strand at 4758.617 kb on - strand, within AO353_21695 at 4759.191 kb on - strand, within AO353_21700 at 4759.231 kb on + strand, within AO353_21700 at 4759.231 kb on + strand, within AO353_21700 at 4759.231 kb on + strand, within AO353_21700 at 4759.286 kb on + strand, within AO353_21700 at 4759.297 kb on + strand, within AO353_21700 at 4759.297 kb on + strand, within AO353_21700 at 4759.297 kb on + strand, within AO353_21700 at 4759.297 kb on + strand, within AO353_21700 at 4759.297 kb on + strand, within AO353_21700 at 4759.298 kb on - strand, within AO353_21700 at 4759.298 kb on - strand, within AO353_21700 at 4759.298 kb on - strand, within AO353_21700 at 4759.316 kb on + strand, within AO353_21700 at 4759.317 kb on - strand, within AO353_21700 at 4759.318 kb on + strand, within AO353_21700 at 4759.318 kb on + strand, within AO353_21700 at 4759.319 kb on - strand, within AO353_21700 at 4759.319 kb on - strand, within AO353_21700 at 4759.319 kb on - strand, within AO353_21700 at 4759.342 kb on - strand, within AO353_21700 at 4759.366 kb on + strand, within AO353_21700 at 4759.366 kb on + strand, within AO353_21700 at 4759.388 kb on - strand, within AO353_21700 at 4759.388 kb on - strand, within AO353_21700 at 4759.388 kb on - strand, within AO353_21700 at 4759.406 kb on - strand, within AO353_21700 at 4759.471 kb on + strand at 4759.472 kb on - strand at 4759.472 kb on - strand at 4759.502 kb on + strand at 4759.502 kb on + strand at 4759.502 kb on + strand at 4759.502 kb on + strand at 4759.502 kb on + strand at 4759.502 kb on + strand at 4759.502 kb on + strand at 4759.502 kb on + strand at 4759.502 kb on + strand at 4759.503 kb on - strand at 4759.503 kb on - strand at 4759.503 kb on - strand at 4759.503 kb on - strand at 4759.506 kb on + strand at 4759.506 kb on + strand at 4759.506 kb on + strand at 4759.506 kb on + strand at 4759.507 kb on - strand at 4759.507 kb on - strand at 4759.507 kb on - strand at 4759.562 kb on + strand at 4759.563 kb on - strand at 4759.563 kb on - strand at 4759.563 kb on - strand at 4759.570 kb on - strand at 4759.903 kb on - strand, within AO353_21705 at 4759.915 kb on - strand, within AO353_21705 at 4759.915 kb on - strand, within AO353_21705 at 4759.915 kb on - strand, within AO353_21705 at 4759.925 kb on + strand, within AO353_21705 at 4759.926 kb on - strand, within AO353_21705 at 4759.926 kb on - strand, within AO353_21705 at 4759.944 kb on - strand, within AO353_21705 at 4759.956 kb on - strand, within AO353_21705
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.032 mg/mL remove 4,757,643 + AO353_21690 0.31 +2.2 4,757,643 + AO353_21690 0.31 +0.1 4,757,644 - AO353_21690 0.32 +0.8 4,757,644 - AO353_21690 0.32 -0.6 4,757,644 - AO353_21690 0.32 +0.2 4,757,703 + AO353_21690 0.36 -0.4 4,757,703 + AO353_21690 0.36 +0.3 4,757,703 + AO353_21690 0.36 +1.1 4,757,703 + AO353_21690 0.36 -0.2 4,757,703 + AO353_21690 0.36 -0.2 4,757,703 + AO353_21690 0.36 -1.5 4,757,703 + AO353_21690 0.36 -0.2 4,757,703 + AO353_21690 0.36 -0.5 4,757,704 - AO353_21690 0.36 +1.2 4,757,704 - AO353_21690 0.36 -0.8 4,757,961 + AO353_21690 0.57 -1.9 4,757,962 - AO353_21690 0.58 -0.9 4,757,962 - AO353_21690 0.58 +0.2 4,758,266 + AO353_21690 0.82 -1.3 4,758,267 - AO353_21690 0.82 +0.1 4,758,267 - AO353_21690 0.82 -0.6 4,758,267 - AO353_21690 0.82 -0.3 4,758,267 - AO353_21690 0.82 +1.0 4,758,267 - AO353_21690 0.82 +0.2 4,758,267 - AO353_21690 0.82 +0.9 4,758,305 + AO353_21690 0.86 -0.9 4,758,305 + AO353_21690 0.86 -1.1 4,758,305 + AO353_21690 0.86 +1.2 4,758,305 + AO353_21690 0.86 +0.1 4,758,305 + AO353_21690 0.86 -0.6 4,758,306 - AO353_21690 0.86 +1.1 4,758,306 - AO353_21690 0.86 -0.1 4,758,306 - AO353_21690 0.86 +1.5 4,758,306 - AO353_21690 0.86 +2.5 4,758,306 - AO353_21690 0.86 -0.8 4,758,496 + +0.2 4,758,497 - -1.3 4,758,513 + -0.6 4,758,519 + +0.8 4,758,617 - AO353_21695 0.14 -0.5 4,759,191 - AO353_21700 0.35 +0.5 4,759,231 + AO353_21700 0.44 -0.2 4,759,231 + AO353_21700 0.44 +0.2 4,759,231 + AO353_21700 0.44 -0.5 4,759,286 + AO353_21700 0.57 -2.4 4,759,297 + AO353_21700 0.60 +0.3 4,759,297 + AO353_21700 0.60 -1.7 4,759,297 + AO353_21700 0.60 +1.5 4,759,297 + AO353_21700 0.60 -1.6 4,759,297 + AO353_21700 0.60 -0.3 4,759,298 - AO353_21700 0.60 +0.4 4,759,298 - AO353_21700 0.60 -0.6 4,759,298 - AO353_21700 0.60 +0.5 4,759,316 + AO353_21700 0.64 +0.5 4,759,317 - AO353_21700 0.65 +1.9 4,759,318 + AO353_21700 0.65 -0.9 4,759,318 + AO353_21700 0.65 +0.7 4,759,319 - AO353_21700 0.65 +0.6 4,759,319 - AO353_21700 0.65 -0.8 4,759,319 - AO353_21700 0.65 +0.1 4,759,342 - AO353_21700 0.70 +0.1 4,759,366 + AO353_21700 0.76 +0.5 4,759,366 + AO353_21700 0.76 +0.4 4,759,388 - AO353_21700 0.81 +1.5 4,759,388 - AO353_21700 0.81 -0.3 4,759,388 - AO353_21700 0.81 -1.3 4,759,406 - AO353_21700 0.86 -1.3 4,759,471 + +0.4 4,759,472 - -0.3 4,759,472 - -0.4 4,759,502 + -1.6 4,759,502 + -1.0 4,759,502 + +0.9 4,759,502 + -0.6 4,759,502 + -0.3 4,759,502 + +1.2 4,759,502 + -0.1 4,759,502 + -0.6 4,759,502 + -0.1 4,759,503 - -1.1 4,759,503 - -0.5 4,759,503 - -1.2 4,759,503 - -0.4 4,759,506 + +0.2 4,759,506 + -1.8 4,759,506 + -0.6 4,759,506 + +0.2 4,759,507 - +0.5 4,759,507 - -0.3 4,759,507 - -1.1 4,759,562 + -1.8 4,759,563 - +0.9 4,759,563 - -0.8 4,759,563 - -0.4 4,759,570 - -1.1 4,759,903 - AO353_21705 0.64 -0.9 4,759,915 - AO353_21705 0.67 -1.1 4,759,915 - AO353_21705 0.67 -1.4 4,759,915 - AO353_21705 0.67 -1.3 4,759,925 + AO353_21705 0.69 +0.3 4,759,926 - AO353_21705 0.69 +0.8 4,759,926 - AO353_21705 0.69 -0.6 4,759,944 - AO353_21705 0.74 +0.1 4,759,956 - AO353_21705 0.77 -0.6
Or see this region's nucleotide sequence