Experiment: Paraquat dichloride 0.032 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_18480 and AO353_18485 are separated by 120 nucleotides AO353_18485 and AO353_18490 are separated by 37 nucleotides
AO353_18480: AO353_18480 - potassium transporter TrkH, at 4,069,429 to 4,070,883
_18480
AO353_18485: AO353_18485 - nitroreductase, at 4,071,004 to 4,071,570
_18485
AO353_18490: AO353_18490 - histidine kinase, at 4,071,608 to 4,072,954
_18490
Position (kb)
4071
4072 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4070.013 kb on - strand, within AO353_18480 at 4070.026 kb on + strand, within AO353_18480 at 4070.104 kb on + strand, within AO353_18480 at 4070.117 kb on + strand, within AO353_18480 at 4070.117 kb on + strand, within AO353_18480 at 4070.117 kb on + strand, within AO353_18480 at 4070.117 kb on + strand, within AO353_18480 at 4070.117 kb on + strand, within AO353_18480 at 4070.117 kb on + strand, within AO353_18480 at 4070.118 kb on - strand, within AO353_18480 at 4070.118 kb on - strand, within AO353_18480 at 4070.124 kb on + strand, within AO353_18480 at 4070.124 kb on + strand, within AO353_18480 at 4070.124 kb on + strand, within AO353_18480 at 4070.124 kb on + strand, within AO353_18480 at 4070.124 kb on + strand, within AO353_18480 at 4070.124 kb on + strand, within AO353_18480 at 4070.125 kb on - strand, within AO353_18480 at 4070.125 kb on - strand, within AO353_18480 at 4070.125 kb on - strand, within AO353_18480 at 4070.125 kb on - strand, within AO353_18480 at 4070.125 kb on - strand, within AO353_18480 at 4070.125 kb on - strand, within AO353_18480 at 4070.231 kb on - strand, within AO353_18480 at 4070.419 kb on + strand, within AO353_18480 at 4070.419 kb on + strand, within AO353_18480 at 4070.420 kb on - strand, within AO353_18480 at 4070.535 kb on + strand, within AO353_18480 at 4070.535 kb on + strand, within AO353_18480 at 4070.535 kb on + strand, within AO353_18480 at 4070.535 kb on + strand, within AO353_18480 at 4070.535 kb on + strand, within AO353_18480 at 4070.535 kb on + strand, within AO353_18480 at 4070.535 kb on + strand, within AO353_18480 at 4070.536 kb on - strand, within AO353_18480 at 4070.536 kb on - strand, within AO353_18480 at 4070.536 kb on - strand, within AO353_18480 at 4070.536 kb on - strand, within AO353_18480 at 4070.536 kb on - strand, within AO353_18480 at 4070.585 kb on + strand, within AO353_18480 at 4070.585 kb on + strand, within AO353_18480 at 4070.585 kb on + strand, within AO353_18480 at 4070.585 kb on + strand, within AO353_18480 at 4070.586 kb on - strand, within AO353_18480 at 4070.586 kb on - strand, within AO353_18480 at 4070.586 kb on - strand, within AO353_18480 at 4070.626 kb on + strand, within AO353_18480 at 4070.626 kb on + strand, within AO353_18480 at 4070.663 kb on + strand, within AO353_18480 at 4070.663 kb on + strand, within AO353_18480 at 4070.663 kb on + strand, within AO353_18480 at 4070.663 kb on + strand, within AO353_18480 at 4070.663 kb on + strand, within AO353_18480 at 4070.663 kb on + strand, within AO353_18480 at 4070.663 kb on + strand, within AO353_18480 at 4070.664 kb on - strand, within AO353_18480 at 4070.664 kb on - strand, within AO353_18480 at 4070.664 kb on - strand, within AO353_18480 at 4070.664 kb on - strand, within AO353_18480 at 4070.664 kb on - strand, within AO353_18480 at 4070.664 kb on - strand, within AO353_18480 at 4070.664 kb on - strand, within AO353_18480 at 4070.664 kb on - strand, within AO353_18480 at 4070.664 kb on - strand, within AO353_18480 at 4070.664 kb on - strand, within AO353_18480 at 4070.664 kb on - strand, within AO353_18480 at 4070.664 kb on - strand, within AO353_18480 at 4070.664 kb on - strand, within AO353_18480 at 4070.664 kb on - strand, within AO353_18480 at 4070.664 kb on - strand, within AO353_18480 at 4070.664 kb on - strand, within AO353_18480 at 4070.664 kb on - strand, within AO353_18480 at 4070.664 kb on - strand, within AO353_18480 at 4070.664 kb on - strand, within AO353_18480 at 4070.686 kb on + strand, within AO353_18480 at 4070.686 kb on + strand, within AO353_18480 at 4070.686 kb on + strand, within AO353_18480 at 4070.686 kb on + strand, within AO353_18480 at 4070.686 kb on + strand, within AO353_18480 at 4070.686 kb on + strand, within AO353_18480 at 4070.686 kb on + strand, within AO353_18480 at 4070.686 kb on + strand, within AO353_18480 at 4070.686 kb on + strand, within AO353_18480 at 4070.686 kb on + strand, within AO353_18480 at 4070.686 kb on + strand, within AO353_18480 at 4070.686 kb on + strand, within AO353_18480 at 4070.686 kb on + strand, within AO353_18480 at 4070.686 kb on + strand, within AO353_18480 at 4070.686 kb on + strand, within AO353_18480 at 4070.686 kb on + strand, within AO353_18480 at 4070.686 kb on + strand, within AO353_18480 at 4070.686 kb on + strand, within AO353_18480 at 4070.686 kb on + strand, within AO353_18480 at 4070.686 kb on + strand, within AO353_18480 at 4070.686 kb on + strand, within AO353_18480 at 4070.687 kb on - strand, within AO353_18480 at 4070.687 kb on - strand, within AO353_18480 at 4070.687 kb on - strand, within AO353_18480 at 4070.687 kb on - strand, within AO353_18480 at 4070.687 kb on - strand, within AO353_18480 at 4070.687 kb on - strand, within AO353_18480 at 4070.687 kb on - strand, within AO353_18480 at 4070.687 kb on - strand, within AO353_18480 at 4070.687 kb on - strand, within AO353_18480 at 4070.687 kb on - strand, within AO353_18480 at 4070.687 kb on - strand, within AO353_18480 at 4070.687 kb on - strand, within AO353_18480 at 4070.687 kb on - strand, within AO353_18480 at 4070.687 kb on - strand at 4070.687 kb on - strand, within AO353_18480 at 4070.687 kb on - strand, within AO353_18480 at 4070.687 kb on - strand, within AO353_18480 at 4070.687 kb on - strand, within AO353_18480 at 4070.687 kb on - strand, within AO353_18480 at 4070.687 kb on - strand, within AO353_18480 at 4070.687 kb on - strand, within AO353_18480 at 4070.687 kb on - strand, within AO353_18480 at 4070.687 kb on - strand, within AO353_18480 at 4070.687 kb on - strand, within AO353_18480 at 4070.687 kb on - strand, within AO353_18480 at 4070.687 kb on - strand, within AO353_18480 at 4070.687 kb on - strand, within AO353_18480 at 4070.687 kb on - strand, within AO353_18480 at 4070.688 kb on + strand, within AO353_18480 at 4070.688 kb on + strand, within AO353_18480 at 4070.688 kb on + strand, within AO353_18480 at 4070.688 kb on + strand, within AO353_18480 at 4070.688 kb on + strand, within AO353_18480 at 4070.688 kb on + strand, within AO353_18480 at 4070.688 kb on + strand, within AO353_18480 at 4070.688 kb on + strand, within AO353_18480 at 4070.688 kb on + strand, within AO353_18480 at 4070.688 kb on + strand, within AO353_18480 at 4070.688 kb on + strand, within AO353_18480 at 4070.689 kb on - strand, within AO353_18480 at 4070.689 kb on - strand, within AO353_18480 at 4070.689 kb on - strand, within AO353_18480 at 4070.736 kb on + strand, within AO353_18480 at 4070.737 kb on - strand, within AO353_18480 at 4070.737 kb on - strand, within AO353_18480 at 4070.920 kb on + strand at 4070.920 kb on + strand at 4070.921 kb on - strand at 4070.921 kb on - strand at 4070.940 kb on + strand at 4070.940 kb on + strand at 4070.941 kb on - strand at 4070.941 kb on - strand at 4070.941 kb on - strand at 4070.941 kb on - strand at 4070.941 kb on - strand at 4070.941 kb on - strand at 4070.941 kb on - strand at 4070.941 kb on - strand at 4070.941 kb on - strand at 4070.969 kb on + strand at 4070.969 kb on + strand at 4071.147 kb on + strand, within AO353_18485 at 4071.185 kb on + strand, within AO353_18485 at 4071.186 kb on - strand, within AO353_18485 at 4071.186 kb on - strand, within AO353_18485 at 4071.360 kb on + strand, within AO353_18485 at 4071.361 kb on - strand, within AO353_18485 at 4071.361 kb on - strand, within AO353_18485 at 4071.376 kb on + strand, within AO353_18485 at 4071.377 kb on - strand, within AO353_18485 at 4071.377 kb on - strand, within AO353_18485 at 4071.377 kb on - strand, within AO353_18485 at 4071.377 kb on - strand, within AO353_18485 at 4071.485 kb on - strand, within AO353_18485 at 4071.485 kb on - strand, within AO353_18485 at 4071.630 kb on - strand at 4071.630 kb on - strand at 4071.806 kb on + strand, within AO353_18490 at 4071.806 kb on + strand, within AO353_18490 at 4071.806 kb on + strand, within AO353_18490 at 4071.962 kb on + strand, within AO353_18490 at 4071.962 kb on + strand, within AO353_18490 at 4071.962 kb on + strand, within AO353_18490 at 4071.962 kb on + strand, within AO353_18490 at 4071.962 kb on + strand, within AO353_18490 at 4071.962 kb on + strand, within AO353_18490 at 4071.963 kb on - strand, within AO353_18490 at 4071.963 kb on - strand, within AO353_18490 at 4071.963 kb on - strand, within AO353_18490 at 4071.963 kb on - strand, within AO353_18490 at 4071.963 kb on - strand, within AO353_18490 at 4071.963 kb on - strand, within AO353_18490 at 4072.030 kb on + strand, within AO353_18490 at 4072.030 kb on + strand, within AO353_18490 at 4072.030 kb on + strand, within AO353_18490 at 4072.030 kb on + strand, within AO353_18490 at 4072.031 kb on - strand, within AO353_18490 at 4072.031 kb on - strand, within AO353_18490 at 4072.031 kb on - strand, within AO353_18490 at 4072.031 kb on - strand, within AO353_18490 at 4072.031 kb on - strand, within AO353_18490 at 4072.031 kb on - strand, within AO353_18490 at 4072.371 kb on + strand, within AO353_18490 at 4072.371 kb on + strand, within AO353_18490 at 4072.371 kb on + strand, within AO353_18490 at 4072.372 kb on - strand, within AO353_18490 at 4072.372 kb on - strand, within AO353_18490 at 4072.372 kb on - strand, within AO353_18490 at 4072.372 kb on - strand, within AO353_18490 at 4072.372 kb on - strand, within AO353_18490 at 4072.372 kb on - strand, within AO353_18490 at 4072.543 kb on + strand, within AO353_18490 at 4072.543 kb on + strand, within AO353_18490 at 4072.544 kb on - strand, within AO353_18490 at 4072.544 kb on - strand, within AO353_18490 at 4072.544 kb on - strand, within AO353_18490 at 4072.544 kb on - strand, within AO353_18490 at 4072.544 kb on - strand, within AO353_18490 at 4072.548 kb on + strand, within AO353_18490 at 4072.548 kb on + strand, within AO353_18490 at 4072.549 kb on - strand, within AO353_18490 at 4072.560 kb on + strand, within AO353_18490 at 4072.561 kb on - strand, within AO353_18490 at 4072.561 kb on - strand, within AO353_18490 at 4072.561 kb on - strand, within AO353_18490 at 4072.561 kb on - strand, within AO353_18490 at 4072.561 kb on - strand, within AO353_18490 at 4072.561 kb on - strand, within AO353_18490
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.032 mg/mL remove 4,070,013 - AO353_18480 0.40 +1.8 4,070,026 + AO353_18480 0.41 -0.5 4,070,104 + AO353_18480 0.46 +1.1 4,070,117 + AO353_18480 0.47 +1.8 4,070,117 + AO353_18480 0.47 +0.5 4,070,117 + AO353_18480 0.47 -0.3 4,070,117 + AO353_18480 0.47 -0.2 4,070,117 + AO353_18480 0.47 +1.1 4,070,117 + AO353_18480 0.47 +0.4 4,070,118 - AO353_18480 0.47 -0.4 4,070,118 - AO353_18480 0.47 -0.3 4,070,124 + AO353_18480 0.48 -1.2 4,070,124 + AO353_18480 0.48 -0.2 4,070,124 + AO353_18480 0.48 -1.9 4,070,124 + AO353_18480 0.48 -0.2 4,070,124 + AO353_18480 0.48 -0.3 4,070,124 + AO353_18480 0.48 -1.4 4,070,125 - AO353_18480 0.48 -0.4 4,070,125 - AO353_18480 0.48 +1.7 4,070,125 - AO353_18480 0.48 -0.2 4,070,125 - AO353_18480 0.48 -0.2 4,070,125 - AO353_18480 0.48 -0.3 4,070,125 - AO353_18480 0.48 +0.3 4,070,231 - AO353_18480 0.55 -0.9 4,070,419 + AO353_18480 0.68 -0.9 4,070,419 + AO353_18480 0.68 -1.6 4,070,420 - AO353_18480 0.68 +1.8 4,070,535 + AO353_18480 0.76 +0.2 4,070,535 + AO353_18480 0.76 +2.1 4,070,535 + AO353_18480 0.76 +0.8 4,070,535 + AO353_18480 0.76 -0.3 4,070,535 + AO353_18480 0.76 -2.1 4,070,535 + AO353_18480 0.76 -0.2 4,070,535 + AO353_18480 0.76 +0.7 4,070,536 - AO353_18480 0.76 +1.1 4,070,536 - AO353_18480 0.76 -0.5 4,070,536 - AO353_18480 0.76 +0.2 4,070,536 - AO353_18480 0.76 -0.3 4,070,536 - AO353_18480 0.76 +1.9 4,070,585 + AO353_18480 0.79 +0.4 4,070,585 + AO353_18480 0.79 -1.0 4,070,585 + AO353_18480 0.79 +0.5 4,070,585 + AO353_18480 0.79 +0.4 4,070,586 - AO353_18480 0.80 +0.7 4,070,586 - AO353_18480 0.80 -0.2 4,070,586 - AO353_18480 0.80 -1.3 4,070,626 + AO353_18480 0.82 +0.2 4,070,626 + AO353_18480 0.82 -0.3 4,070,663 + AO353_18480 0.85 +1.2 4,070,663 + AO353_18480 0.85 +1.6 4,070,663 + AO353_18480 0.85 +0.9 4,070,663 + AO353_18480 0.85 -0.6 4,070,663 + AO353_18480 0.85 +0.7 4,070,663 + AO353_18480 0.85 +0.5 4,070,663 + AO353_18480 0.85 -1.0 4,070,664 - AO353_18480 0.85 +0.3 4,070,664 - AO353_18480 0.85 +0.2 4,070,664 - AO353_18480 0.85 +1.0 4,070,664 - AO353_18480 0.85 +1.3 4,070,664 - AO353_18480 0.85 +0.1 4,070,664 - AO353_18480 0.85 +1.9 4,070,664 - AO353_18480 0.85 -0.2 4,070,664 - AO353_18480 0.85 +0.4 4,070,664 - AO353_18480 0.85 -0.2 4,070,664 - AO353_18480 0.85 +1.7 4,070,664 - AO353_18480 0.85 -0.5 4,070,664 - AO353_18480 0.85 +0.8 4,070,664 - AO353_18480 0.85 +1.2 4,070,664 - AO353_18480 0.85 +0.7 4,070,664 - AO353_18480 0.85 -0.5 4,070,664 - AO353_18480 0.85 +0.7 4,070,664 - AO353_18480 0.85 +0.5 4,070,664 - AO353_18480 0.85 -0.7 4,070,664 - AO353_18480 0.85 +0.2 4,070,686 + AO353_18480 0.86 +0.3 4,070,686 + AO353_18480 0.86 -1.6 4,070,686 + AO353_18480 0.86 +0.7 4,070,686 + AO353_18480 0.86 +1.0 4,070,686 + AO353_18480 0.86 +0.3 4,070,686 + AO353_18480 0.86 -0.6 4,070,686 + AO353_18480 0.86 +1.8 4,070,686 + AO353_18480 0.86 -1.2 4,070,686 + AO353_18480 0.86 -0.7 4,070,686 + AO353_18480 0.86 -0.9 4,070,686 + AO353_18480 0.86 -0.3 4,070,686 + AO353_18480 0.86 -1.5 4,070,686 + AO353_18480 0.86 -1.3 4,070,686 + AO353_18480 0.86 +2.7 4,070,686 + AO353_18480 0.86 +1.7 4,070,686 + AO353_18480 0.86 +0.6 4,070,686 + AO353_18480 0.86 +1.1 4,070,686 + AO353_18480 0.86 +0.1 4,070,686 + AO353_18480 0.86 +0.1 4,070,686 + AO353_18480 0.86 -0.9 4,070,686 + AO353_18480 0.86 -0.6 4,070,687 - AO353_18480 0.86 -0.3 4,070,687 - AO353_18480 0.86 -1.7 4,070,687 - AO353_18480 0.86 -0.9 4,070,687 - AO353_18480 0.86 -0.7 4,070,687 - AO353_18480 0.86 -1.0 4,070,687 - AO353_18480 0.86 -1.2 4,070,687 - AO353_18480 0.86 +0.4 4,070,687 - AO353_18480 0.86 -1.1 4,070,687 - AO353_18480 0.86 +0.2 4,070,687 - AO353_18480 0.86 +0.2 4,070,687 - AO353_18480 0.86 -1.4 4,070,687 - AO353_18480 0.86 +0.7 4,070,687 - AO353_18480 0.86 -0.3 4,070,687 - +1.1 4,070,687 - AO353_18480 0.86 -0.2 4,070,687 - AO353_18480 0.86 -0.7 4,070,687 - AO353_18480 0.86 -1.0 4,070,687 - AO353_18480 0.86 -0.6 4,070,687 - AO353_18480 0.86 +1.5 4,070,687 - AO353_18480 0.86 -2.2 4,070,687 - AO353_18480 0.86 -1.8 4,070,687 - AO353_18480 0.86 -1.0 4,070,687 - AO353_18480 0.86 -1.0 4,070,687 - AO353_18480 0.86 +1.3 4,070,687 - AO353_18480 0.86 -0.6 4,070,687 - AO353_18480 0.86 -0.9 4,070,687 - AO353_18480 0.86 -0.3 4,070,687 - AO353_18480 0.86 -0.3 4,070,688 + AO353_18480 0.87 -0.8 4,070,688 + AO353_18480 0.87 -1.8 4,070,688 + AO353_18480 0.87 -1.2 4,070,688 + AO353_18480 0.87 -0.7 4,070,688 + AO353_18480 0.87 -0.7 4,070,688 + AO353_18480 0.87 +1.8 4,070,688 + AO353_18480 0.87 -0.6 4,070,688 + AO353_18480 0.87 +1.1 4,070,688 + AO353_18480 0.87 -0.3 4,070,688 + AO353_18480 0.87 +0.5 4,070,688 + AO353_18480 0.87 -0.2 4,070,689 - AO353_18480 0.87 +0.9 4,070,689 - AO353_18480 0.87 +0.7 4,070,689 - AO353_18480 0.87 +0.7 4,070,736 + AO353_18480 0.90 +0.3 4,070,737 - AO353_18480 0.90 +0.0 4,070,737 - AO353_18480 0.90 +0.5 4,070,920 + +0.2 4,070,920 + -2.5 4,070,921 - -1.3 4,070,921 - +0.6 4,070,940 + +1.3 4,070,940 + -0.7 4,070,941 - +0.3 4,070,941 - -1.4 4,070,941 - +1.4 4,070,941 - -1.5 4,070,941 - +0.5 4,070,941 - -0.7 4,070,941 - -0.2 4,070,941 - -1.0 4,070,941 - -1.8 4,070,969 + -0.6 4,070,969 + +0.7 4,071,147 + AO353_18485 0.25 -0.0 4,071,185 + AO353_18485 0.32 -0.1 4,071,186 - AO353_18485 0.32 -1.3 4,071,186 - AO353_18485 0.32 -2.3 4,071,360 + AO353_18485 0.63 -1.9 4,071,361 - AO353_18485 0.63 -0.9 4,071,361 - AO353_18485 0.63 -1.0 4,071,376 + AO353_18485 0.66 -0.8 4,071,377 - AO353_18485 0.66 -0.3 4,071,377 - AO353_18485 0.66 +0.7 4,071,377 - AO353_18485 0.66 -0.2 4,071,377 - AO353_18485 0.66 +1.4 4,071,485 - AO353_18485 0.85 +0.7 4,071,485 - AO353_18485 0.85 +0.2 4,071,630 - +1.3 4,071,630 - +0.3 4,071,806 + AO353_18490 0.15 +0.1 4,071,806 + AO353_18490 0.15 -0.8 4,071,806 + AO353_18490 0.15 -0.2 4,071,962 + AO353_18490 0.26 -1.9 4,071,962 + AO353_18490 0.26 +0.8 4,071,962 + AO353_18490 0.26 -0.7 4,071,962 + AO353_18490 0.26 -1.3 4,071,962 + AO353_18490 0.26 -0.6 4,071,962 + AO353_18490 0.26 -1.0 4,071,963 - AO353_18490 0.26 +0.8 4,071,963 - AO353_18490 0.26 -0.2 4,071,963 - AO353_18490 0.26 +0.2 4,071,963 - AO353_18490 0.26 +0.5 4,071,963 - AO353_18490 0.26 +1.5 4,071,963 - AO353_18490 0.26 +1.2 4,072,030 + AO353_18490 0.31 -1.4 4,072,030 + AO353_18490 0.31 -0.2 4,072,030 + AO353_18490 0.31 +2.1 4,072,030 + AO353_18490 0.31 -0.1 4,072,031 - AO353_18490 0.31 +1.4 4,072,031 - AO353_18490 0.31 -0.8 4,072,031 - AO353_18490 0.31 -2.2 4,072,031 - AO353_18490 0.31 +2.7 4,072,031 - AO353_18490 0.31 +1.3 4,072,031 - AO353_18490 0.31 +0.1 4,072,371 + AO353_18490 0.57 +1.9 4,072,371 + AO353_18490 0.57 -1.0 4,072,371 + AO353_18490 0.57 -0.7 4,072,372 - AO353_18490 0.57 -1.0 4,072,372 - AO353_18490 0.57 -0.9 4,072,372 - AO353_18490 0.57 +1.0 4,072,372 - AO353_18490 0.57 -0.3 4,072,372 - AO353_18490 0.57 -1.8 4,072,372 - AO353_18490 0.57 -1.3 4,072,543 + AO353_18490 0.69 +3.2 4,072,543 + AO353_18490 0.69 -1.9 4,072,544 - AO353_18490 0.69 -0.5 4,072,544 - AO353_18490 0.69 -0.8 4,072,544 - AO353_18490 0.69 -0.1 4,072,544 - AO353_18490 0.69 -1.7 4,072,544 - AO353_18490 0.69 -1.5 4,072,548 + AO353_18490 0.70 +0.3 4,072,548 + AO353_18490 0.70 +0.5 4,072,549 - AO353_18490 0.70 -0.5 4,072,560 + AO353_18490 0.71 -1.3 4,072,561 - AO353_18490 0.71 -1.9 4,072,561 - AO353_18490 0.71 -1.0 4,072,561 - AO353_18490 0.71 +0.0 4,072,561 - AO353_18490 0.71 +0.5 4,072,561 - AO353_18490 0.71 -1.6 4,072,561 - AO353_18490 0.71 -0.3
Or see this region's nucleotide sequence