Experiment: Paraquat dichloride 0.032 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_16945 and AO353_16950 are separated by 142 nucleotides AO353_16950 and AO353_16955 are separated by 13 nucleotides AO353_16955 and AO353_16960 are separated by 27 nucleotides AO353_16960 and AO353_16965 overlap by 4 nucleotides
AO353_16945: AO353_16945 - hypothetical protein, at 3,749,156 to 3,749,374
_16945
AO353_16950: AO353_16950 - amino acid transporter, at 3,749,517 to 3,750,281
_16950
AO353_16955: AO353_16955 - succinylglutamate desuccinylase, at 3,750,295 to 3,751,413
_16955
AO353_16960: AO353_16960 - amino acid ABC transporter permease, at 3,751,441 to 3,752,151
_16960
AO353_16965: AO353_16965 - amino acid ABC transporter permease, at 3,752,148 to 3,752,876
_16965
Position (kb)
3750
3751
3752 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3749.466 kb on + strand at 3749.467 kb on - strand at 3749.503 kb on + strand at 3749.504 kb on - strand at 3749.518 kb on + strand at 3750.251 kb on + strand at 3750.251 kb on + strand at 3750.251 kb on + strand at 3750.251 kb on + strand at 3750.251 kb on + strand at 3750.251 kb on + strand at 3750.251 kb on + strand at 3750.251 kb on + strand at 3750.251 kb on + strand at 3750.251 kb on + strand at 3750.251 kb on + strand at 3750.252 kb on - strand at 3750.252 kb on - strand at 3750.252 kb on - strand at 3750.252 kb on - strand at 3750.252 kb on - strand at 3750.252 kb on - strand at 3750.252 kb on - strand at 3750.252 kb on - strand at 3750.252 kb on - strand at 3750.252 kb on - strand at 3750.252 kb on - strand at 3750.252 kb on - strand at 3750.252 kb on - strand at 3750.277 kb on + strand at 3750.277 kb on + strand at 3750.277 kb on + strand at 3750.277 kb on + strand at 3750.277 kb on + strand at 3750.277 kb on + strand at 3750.277 kb on + strand at 3750.278 kb on - strand at 3750.278 kb on - strand at 3750.278 kb on - strand at 3750.278 kb on - strand at 3750.307 kb on + strand at 3750.307 kb on + strand at 3750.307 kb on + strand at 3750.307 kb on + strand at 3750.307 kb on + strand at 3750.307 kb on + strand at 3750.307 kb on + strand at 3750.307 kb on + strand at 3750.308 kb on - strand at 3750.308 kb on - strand at 3750.308 kb on - strand at 3750.308 kb on - strand at 3750.308 kb on - strand at 3750.308 kb on - strand at 3750.393 kb on - strand at 3750.482 kb on + strand, within AO353_16955 at 3750.503 kb on + strand, within AO353_16955 at 3750.503 kb on + strand, within AO353_16955 at 3750.504 kb on - strand, within AO353_16955 at 3750.504 kb on - strand, within AO353_16955 at 3750.542 kb on - strand, within AO353_16955 at 3750.623 kb on + strand, within AO353_16955 at 3750.623 kb on + strand, within AO353_16955 at 3750.833 kb on + strand, within AO353_16955 at 3750.834 kb on - strand, within AO353_16955 at 3750.834 kb on - strand, within AO353_16955 at 3750.878 kb on + strand, within AO353_16955 at 3750.878 kb on + strand, within AO353_16955 at 3750.878 kb on + strand, within AO353_16955 at 3750.878 kb on + strand, within AO353_16955 at 3750.878 kb on + strand, within AO353_16955 at 3750.879 kb on - strand, within AO353_16955 at 3750.879 kb on - strand, within AO353_16955 at 3750.879 kb on - strand, within AO353_16955 at 3750.879 kb on - strand, within AO353_16955 at 3751.313 kb on + strand at 3751.314 kb on - strand at 3751.314 kb on - strand at 3751.442 kb on + strand at 3751.443 kb on - strand at 3751.443 kb on - strand at 3751.443 kb on - strand at 3751.443 kb on - strand at 3751.443 kb on - strand at 3751.443 kb on - strand at 3751.443 kb on - strand at 3751.524 kb on - strand, within AO353_16960 at 3751.624 kb on + strand, within AO353_16960 at 3751.624 kb on + strand, within AO353_16960 at 3751.624 kb on + strand, within AO353_16960 at 3751.624 kb on + strand, within AO353_16960 at 3751.624 kb on + strand, within AO353_16960 at 3751.625 kb on - strand, within AO353_16960 at 3751.625 kb on - strand, within AO353_16960 at 3751.625 kb on - strand, within AO353_16960 at 3751.665 kb on - strand, within AO353_16960 at 3751.665 kb on - strand, within AO353_16960 at 3751.665 kb on - strand, within AO353_16960 at 3751.706 kb on + strand, within AO353_16960 at 3751.706 kb on + strand, within AO353_16960 at 3751.712 kb on + strand, within AO353_16960 at 3751.712 kb on + strand, within AO353_16960 at 3751.712 kb on + strand, within AO353_16960 at 3751.712 kb on + strand, within AO353_16960 at 3751.712 kb on + strand, within AO353_16960 at 3751.712 kb on + strand, within AO353_16960 at 3751.712 kb on + strand, within AO353_16960 at 3751.714 kb on + strand, within AO353_16960 at 3751.714 kb on + strand, within AO353_16960 at 3751.714 kb on + strand, within AO353_16960 at 3751.714 kb on + strand, within AO353_16960 at 3751.714 kb on + strand, within AO353_16960 at 3751.714 kb on + strand, within AO353_16960 at 3751.714 kb on + strand, within AO353_16960 at 3751.714 kb on + strand, within AO353_16960 at 3751.714 kb on + strand, within AO353_16960 at 3751.714 kb on + strand, within AO353_16960 at 3751.714 kb on + strand, within AO353_16960 at 3751.714 kb on + strand, within AO353_16960 at 3751.714 kb on + strand, within AO353_16960 at 3751.714 kb on + strand, within AO353_16960 at 3751.714 kb on + strand, within AO353_16960 at 3751.714 kb on + strand, within AO353_16960 at 3751.714 kb on + strand, within AO353_16960 at 3751.714 kb on + strand, within AO353_16960 at 3751.714 kb on + strand, within AO353_16960 at 3751.737 kb on - strand, within AO353_16960 at 3751.737 kb on - strand, within AO353_16960 at 3751.905 kb on - strand, within AO353_16960 at 3751.905 kb on - strand, within AO353_16960 at 3751.905 kb on - strand, within AO353_16960 at 3751.905 kb on - strand, within AO353_16960 at 3751.905 kb on - strand, within AO353_16960 at 3751.935 kb on + strand, within AO353_16960 at 3751.937 kb on + strand, within AO353_16960 at 3751.937 kb on + strand, within AO353_16960 at 3751.937 kb on + strand at 3751.937 kb on + strand, within AO353_16960 at 3751.937 kb on + strand, within AO353_16960 at 3751.937 kb on + strand, within AO353_16960 at 3751.937 kb on + strand, within AO353_16960 at 3751.937 kb on + strand, within AO353_16960 at 3751.937 kb on + strand, within AO353_16960 at 3751.937 kb on + strand, within AO353_16960 at 3751.961 kb on + strand, within AO353_16960 at 3751.961 kb on + strand, within AO353_16960 at 3751.961 kb on + strand, within AO353_16960 at 3751.961 kb on + strand, within AO353_16960 at 3751.961 kb on + strand, within AO353_16960 at 3751.961 kb on + strand, within AO353_16960 at 3751.961 kb on + strand, within AO353_16960 at 3751.961 kb on + strand, within AO353_16960 at 3751.961 kb on + strand, within AO353_16960 at 3751.967 kb on + strand, within AO353_16960 at 3751.967 kb on + strand, within AO353_16960 at 3751.967 kb on + strand, within AO353_16960 at 3751.967 kb on + strand, within AO353_16960 at 3751.967 kb on + strand, within AO353_16960 at 3751.967 kb on + strand, within AO353_16960 at 3751.968 kb on - strand, within AO353_16960 at 3751.968 kb on - strand, within AO353_16960 at 3751.968 kb on - strand, within AO353_16960 at 3751.968 kb on - strand, within AO353_16960 at 3751.991 kb on + strand, within AO353_16960 at 3751.991 kb on + strand, within AO353_16960 at 3751.991 kb on + strand, within AO353_16960 at 3751.991 kb on + strand, within AO353_16960 at 3751.992 kb on - strand, within AO353_16960 at 3751.992 kb on - strand, within AO353_16960 at 3751.992 kb on - strand, within AO353_16960 at 3751.992 kb on - strand, within AO353_16960 at 3751.992 kb on - strand, within AO353_16960 at 3751.992 kb on - strand, within AO353_16960 at 3751.992 kb on - strand, within AO353_16960 at 3751.992 kb on - strand, within AO353_16960 at 3751.992 kb on - strand, within AO353_16960 at 3752.109 kb on + strand at 3752.111 kb on + strand at 3752.111 kb on + strand at 3752.111 kb on + strand at 3752.111 kb on + strand at 3752.112 kb on - strand at 3752.112 kb on - strand at 3752.112 kb on - strand at 3752.112 kb on - strand at 3752.112 kb on - strand at 3752.112 kb on - strand at 3752.130 kb on - strand at 3752.137 kb on + strand at 3752.137 kb on + strand at 3752.137 kb on + strand at 3752.137 kb on + strand at 3752.138 kb on - strand at 3752.138 kb on - strand at 3752.138 kb on - strand at 3752.138 kb on - strand at 3752.154 kb on + strand at 3752.155 kb on - strand at 3752.155 kb on - strand at 3752.155 kb on - strand at 3752.234 kb on - strand, within AO353_16965 at 3752.234 kb on - strand, within AO353_16965 at 3752.234 kb on - strand, within AO353_16965 at 3752.260 kb on + strand, within AO353_16965 at 3752.260 kb on + strand, within AO353_16965 at 3752.261 kb on - strand, within AO353_16965 at 3752.261 kb on - strand, within AO353_16965 at 3752.261 kb on - strand, within AO353_16965 at 3752.273 kb on - strand, within AO353_16965 at 3752.273 kb on - strand, within AO353_16965 at 3752.273 kb on - strand, within AO353_16965 at 3752.273 kb on - strand, within AO353_16965 at 3752.273 kb on - strand, within AO353_16965 at 3752.282 kb on + strand, within AO353_16965 at 3752.366 kb on + strand, within AO353_16965 at 3752.366 kb on + strand, within AO353_16965 at 3752.367 kb on - strand, within AO353_16965
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.032 mg/mL remove 3,749,466 + +0.8 3,749,467 - +0.3 3,749,503 + +0.4 3,749,504 - -1.8 3,749,518 + +0.1 3,750,251 + -1.1 3,750,251 + -0.6 3,750,251 + +0.2 3,750,251 + -0.4 3,750,251 + +0.2 3,750,251 + -1.4 3,750,251 + -0.4 3,750,251 + +0.0 3,750,251 + +1.6 3,750,251 + -0.4 3,750,251 + +0.4 3,750,252 - +0.2 3,750,252 - -1.0 3,750,252 - -0.1 3,750,252 - -0.8 3,750,252 - +0.4 3,750,252 - +1.8 3,750,252 - +0.4 3,750,252 - +0.8 3,750,252 - -0.7 3,750,252 - -0.2 3,750,252 - +2.5 3,750,252 - -0.9 3,750,252 - +1.3 3,750,277 + +0.6 3,750,277 + -1.8 3,750,277 + +0.3 3,750,277 + -0.2 3,750,277 + -0.6 3,750,277 + -1.5 3,750,277 + -1.0 3,750,278 - +1.8 3,750,278 - -1.0 3,750,278 - -1.6 3,750,278 - +0.8 3,750,307 + -1.8 3,750,307 + -0.7 3,750,307 + -1.3 3,750,307 + -1.5 3,750,307 + +0.8 3,750,307 + -0.2 3,750,307 + -0.7 3,750,307 + +0.9 3,750,308 - -1.0 3,750,308 - -2.2 3,750,308 - +0.5 3,750,308 - -0.3 3,750,308 - +0.1 3,750,308 - +0.4 3,750,393 - +1.6 3,750,482 + AO353_16955 0.17 -0.6 3,750,503 + AO353_16955 0.19 -0.8 3,750,503 + AO353_16955 0.19 +0.7 3,750,504 - AO353_16955 0.19 -0.8 3,750,504 - AO353_16955 0.19 -1.2 3,750,542 - AO353_16955 0.22 +0.2 3,750,623 + AO353_16955 0.29 -1.0 3,750,623 + AO353_16955 0.29 -0.6 3,750,833 + AO353_16955 0.48 -0.7 3,750,834 - AO353_16955 0.48 -1.4 3,750,834 - AO353_16955 0.48 -0.8 3,750,878 + AO353_16955 0.52 -1.1 3,750,878 + AO353_16955 0.52 +0.2 3,750,878 + AO353_16955 0.52 -0.1 3,750,878 + AO353_16955 0.52 -0.0 3,750,878 + AO353_16955 0.52 +1.0 3,750,879 - AO353_16955 0.52 -1.1 3,750,879 - AO353_16955 0.52 +0.2 3,750,879 - AO353_16955 0.52 -0.9 3,750,879 - AO353_16955 0.52 -0.7 3,751,313 + -0.3 3,751,314 - -0.5 3,751,314 - -0.9 3,751,442 + +0.4 3,751,443 - +1.4 3,751,443 - +1.2 3,751,443 - +0.9 3,751,443 - +0.1 3,751,443 - -0.1 3,751,443 - -0.1 3,751,443 - -1.5 3,751,524 - AO353_16960 0.12 -2.0 3,751,624 + AO353_16960 0.26 -0.2 3,751,624 + AO353_16960 0.26 -0.3 3,751,624 + AO353_16960 0.26 -1.2 3,751,624 + AO353_16960 0.26 -1.1 3,751,624 + AO353_16960 0.26 +0.2 3,751,625 - AO353_16960 0.26 -0.2 3,751,625 - AO353_16960 0.26 -1.1 3,751,625 - AO353_16960 0.26 +0.7 3,751,665 - AO353_16960 0.32 +0.4 3,751,665 - AO353_16960 0.32 -1.4 3,751,665 - AO353_16960 0.32 -0.0 3,751,706 + AO353_16960 0.37 -0.8 3,751,706 + AO353_16960 0.37 -1.1 3,751,712 + AO353_16960 0.38 +0.8 3,751,712 + AO353_16960 0.38 +0.8 3,751,712 + AO353_16960 0.38 -0.8 3,751,712 + AO353_16960 0.38 -1.6 3,751,712 + AO353_16960 0.38 +0.9 3,751,712 + AO353_16960 0.38 -0.2 3,751,712 + AO353_16960 0.38 +1.7 3,751,714 + AO353_16960 0.38 +0.7 3,751,714 + AO353_16960 0.38 -0.2 3,751,714 + AO353_16960 0.38 +1.4 3,751,714 + AO353_16960 0.38 +0.2 3,751,714 + AO353_16960 0.38 -1.3 3,751,714 + AO353_16960 0.38 -0.8 3,751,714 + AO353_16960 0.38 -0.7 3,751,714 + AO353_16960 0.38 -0.3 3,751,714 + AO353_16960 0.38 -1.7 3,751,714 + AO353_16960 0.38 -0.4 3,751,714 + AO353_16960 0.38 +0.5 3,751,714 + AO353_16960 0.38 +1.0 3,751,714 + AO353_16960 0.38 -0.0 3,751,714 + AO353_16960 0.38 +1.2 3,751,714 + AO353_16960 0.38 +1.2 3,751,714 + AO353_16960 0.38 -0.0 3,751,714 + AO353_16960 0.38 +1.2 3,751,714 + AO353_16960 0.38 -0.5 3,751,714 + AO353_16960 0.38 +1.2 3,751,737 - AO353_16960 0.42 -0.0 3,751,737 - AO353_16960 0.42 +0.2 3,751,905 - AO353_16960 0.65 -0.8 3,751,905 - AO353_16960 0.65 -1.9 3,751,905 - AO353_16960 0.65 -0.7 3,751,905 - AO353_16960 0.65 +0.5 3,751,905 - AO353_16960 0.65 +0.4 3,751,935 + AO353_16960 0.69 -0.3 3,751,937 + AO353_16960 0.70 -1.9 3,751,937 + AO353_16960 0.70 -0.6 3,751,937 + +1.8 3,751,937 + AO353_16960 0.70 +0.0 3,751,937 + AO353_16960 0.70 +0.4 3,751,937 + AO353_16960 0.70 +1.4 3,751,937 + AO353_16960 0.70 -1.9 3,751,937 + AO353_16960 0.70 -1.2 3,751,937 + AO353_16960 0.70 -1.6 3,751,937 + AO353_16960 0.70 +0.8 3,751,961 + AO353_16960 0.73 -0.9 3,751,961 + AO353_16960 0.73 +0.3 3,751,961 + AO353_16960 0.73 -1.8 3,751,961 + AO353_16960 0.73 +0.4 3,751,961 + AO353_16960 0.73 +0.8 3,751,961 + AO353_16960 0.73 -1.4 3,751,961 + AO353_16960 0.73 -1.5 3,751,961 + AO353_16960 0.73 +0.3 3,751,961 + AO353_16960 0.73 -0.2 3,751,967 + AO353_16960 0.74 -0.1 3,751,967 + AO353_16960 0.74 +0.8 3,751,967 + AO353_16960 0.74 +0.4 3,751,967 + AO353_16960 0.74 -1.3 3,751,967 + AO353_16960 0.74 +1.5 3,751,967 + AO353_16960 0.74 -0.9 3,751,968 - AO353_16960 0.74 -0.0 3,751,968 - AO353_16960 0.74 -0.5 3,751,968 - AO353_16960 0.74 +1.8 3,751,968 - AO353_16960 0.74 +2.0 3,751,991 + AO353_16960 0.77 -0.9 3,751,991 + AO353_16960 0.77 -1.0 3,751,991 + AO353_16960 0.77 +1.2 3,751,991 + AO353_16960 0.77 +1.0 3,751,992 - AO353_16960 0.77 -0.4 3,751,992 - AO353_16960 0.77 +0.7 3,751,992 - AO353_16960 0.77 -0.3 3,751,992 - AO353_16960 0.77 +1.6 3,751,992 - AO353_16960 0.77 +0.3 3,751,992 - AO353_16960 0.77 -0.8 3,751,992 - AO353_16960 0.77 -0.5 3,751,992 - AO353_16960 0.77 +0.2 3,751,992 - AO353_16960 0.77 -0.0 3,752,109 + +1.0 3,752,111 + -1.1 3,752,111 + +0.2 3,752,111 + -1.5 3,752,111 + -0.8 3,752,112 - -1.2 3,752,112 - +1.2 3,752,112 - -1.0 3,752,112 - +0.3 3,752,112 - +1.1 3,752,112 - -0.9 3,752,130 - -0.8 3,752,137 + +1.2 3,752,137 + +0.2 3,752,137 + +0.4 3,752,137 + +1.8 3,752,138 - -1.4 3,752,138 - -0.2 3,752,138 - -0.5 3,752,138 - +0.8 3,752,154 + -0.4 3,752,155 - +0.9 3,752,155 - +0.2 3,752,155 - +0.4 3,752,234 - AO353_16965 0.12 -0.0 3,752,234 - AO353_16965 0.12 +0.8 3,752,234 - AO353_16965 0.12 +0.4 3,752,260 + AO353_16965 0.15 -0.0 3,752,260 + AO353_16965 0.15 -0.9 3,752,261 - AO353_16965 0.16 +0.2 3,752,261 - AO353_16965 0.16 +0.7 3,752,261 - AO353_16965 0.16 -1.3 3,752,273 - AO353_16965 0.17 +1.0 3,752,273 - AO353_16965 0.17 -0.2 3,752,273 - AO353_16965 0.17 -0.1 3,752,273 - AO353_16965 0.17 +1.3 3,752,273 - AO353_16965 0.17 -0.3 3,752,282 + AO353_16965 0.18 -1.2 3,752,366 + AO353_16965 0.30 -1.1 3,752,366 + AO353_16965 0.30 -1.8 3,752,367 - AO353_16965 0.30 +0.1
Or see this region's nucleotide sequence