Experiment: Paraquat dichloride 0.032 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_12680 and AO353_12685 overlap by 4 nucleotides AO353_12685 and AO353_12690 are separated by 9 nucleotides AO353_12690 and AO353_12695 overlap by 20 nucleotides AO353_12695 and AO353_12700 overlap by 25 nucleotides
AO353_12680: AO353_12680 - hypothetical protein, at 2,791,865 to 2,792,410
_12680
AO353_12685: AO353_12685 - acyl carrier protein, at 2,792,407 to 2,792,661
_12685
AO353_12690: AO353_12690 - acyl carrier protein, at 2,792,671 to 2,792,931
_12690
AO353_12695: AO353_12695 - acyltransferase, at 2,792,912 to 2,793,721
_12695
AO353_12700: AO353_12700 - 3-oxoacyl-ACP synthase, at 2,793,697 to 2,794,416
_12700
Position (kb)
2792
2793
2794 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2791.933 kb on - strand, within AO353_12680 at 2791.950 kb on + strand, within AO353_12680 at 2791.950 kb on + strand, within AO353_12680 at 2791.950 kb on + strand, within AO353_12680 at 2791.950 kb on + strand, within AO353_12680 at 2791.950 kb on + strand, within AO353_12680 at 2791.950 kb on + strand, within AO353_12680 at 2791.950 kb on + strand, within AO353_12680 at 2791.951 kb on - strand, within AO353_12680 at 2791.951 kb on - strand, within AO353_12680 at 2791.951 kb on - strand, within AO353_12680 at 2791.951 kb on - strand, within AO353_12680 at 2792.008 kb on + strand, within AO353_12680 at 2792.052 kb on + strand, within AO353_12680 at 2792.052 kb on + strand, within AO353_12680 at 2792.052 kb on + strand, within AO353_12680 at 2792.052 kb on + strand, within AO353_12680 at 2792.052 kb on + strand, within AO353_12680 at 2792.053 kb on - strand, within AO353_12680 at 2792.053 kb on - strand, within AO353_12680 at 2792.053 kb on - strand, within AO353_12680 at 2792.053 kb on - strand, within AO353_12680 at 2792.349 kb on + strand, within AO353_12680 at 2792.349 kb on + strand, within AO353_12680 at 2792.364 kb on + strand at 2792.365 kb on - strand at 2792.432 kb on + strand at 2792.432 kb on + strand at 2792.433 kb on - strand, within AO353_12685 at 2792.564 kb on + strand, within AO353_12685 at 2792.769 kb on - strand, within AO353_12690 at 2792.908 kb on + strand at 2792.908 kb on + strand at 2792.909 kb on - strand at 2792.950 kb on + strand at 2792.951 kb on - strand at 2792.951 kb on - strand at 2792.955 kb on + strand at 2792.955 kb on + strand at 2792.955 kb on + strand at 2792.955 kb on + strand at 2792.955 kb on + strand at 2792.955 kb on + strand at 2792.956 kb on - strand at 2792.956 kb on - strand at 2792.956 kb on - strand at 2792.956 kb on - strand at 2792.967 kb on + strand at 2792.967 kb on + strand at 2792.968 kb on - strand at 2792.968 kb on - strand at 2793.029 kb on + strand, within AO353_12695 at 2793.029 kb on + strand, within AO353_12695 at 2793.029 kb on + strand, within AO353_12695 at 2793.029 kb on + strand, within AO353_12695 at 2793.029 kb on + strand, within AO353_12695 at 2793.029 kb on + strand, within AO353_12695 at 2793.029 kb on + strand, within AO353_12695 at 2793.029 kb on + strand, within AO353_12695 at 2793.029 kb on + strand, within AO353_12695 at 2793.030 kb on - strand, within AO353_12695 at 2793.030 kb on - strand, within AO353_12695 at 2793.030 kb on - strand, within AO353_12695 at 2793.030 kb on - strand, within AO353_12695 at 2793.030 kb on - strand, within AO353_12695 at 2793.303 kb on + strand, within AO353_12695 at 2793.304 kb on - strand, within AO353_12695 at 2793.304 kb on - strand, within AO353_12695 at 2793.304 kb on - strand, within AO353_12695 at 2793.477 kb on + strand, within AO353_12695 at 2793.477 kb on + strand, within AO353_12695 at 2793.477 kb on + strand, within AO353_12695 at 2793.477 kb on + strand, within AO353_12695 at 2793.477 kb on + strand, within AO353_12695 at 2793.477 kb on + strand, within AO353_12695 at 2793.477 kb on + strand, within AO353_12695 at 2793.477 kb on + strand, within AO353_12695 at 2793.478 kb on - strand, within AO353_12695 at 2793.478 kb on - strand, within AO353_12695 at 2793.478 kb on - strand, within AO353_12695 at 2793.538 kb on + strand, within AO353_12695 at 2793.538 kb on + strand, within AO353_12695 at 2793.539 kb on - strand, within AO353_12695 at 2793.539 kb on - strand, within AO353_12695 at 2793.675 kb on + strand at 2793.675 kb on + strand at 2793.675 kb on + strand at 2793.675 kb on + strand at 2793.675 kb on + strand at 2793.691 kb on + strand at 2793.721 kb on + strand at 2793.721 kb on + strand at 2793.721 kb on + strand at 2793.722 kb on - strand at 2793.722 kb on - strand at 2793.722 kb on - strand at 2793.816 kb on + strand, within AO353_12700 at 2793.915 kb on - strand, within AO353_12700 at 2793.915 kb on - strand, within AO353_12700 at 2793.991 kb on + strand, within AO353_12700 at 2793.991 kb on + strand, within AO353_12700 at 2793.992 kb on - strand, within AO353_12700 at 2793.992 kb on - strand, within AO353_12700 at 2793.992 kb on - strand, within AO353_12700 at 2793.992 kb on - strand, within AO353_12700 at 2793.992 kb on - strand, within AO353_12700 at 2794.236 kb on + strand, within AO353_12700 at 2794.237 kb on - strand, within AO353_12700 at 2794.237 kb on - strand, within AO353_12700 at 2794.237 kb on - strand, within AO353_12700 at 2794.237 kb on - strand, within AO353_12700 at 2794.295 kb on - strand, within AO353_12700 at 2794.540 kb on + strand at 2794.540 kb on + strand at 2794.540 kb on + strand at 2794.540 kb on + strand at 2794.540 kb on + strand at 2794.540 kb on + strand at 2794.540 kb on + strand at 2794.541 kb on - strand at 2794.541 kb on - strand at 2794.541 kb on - strand at 2794.616 kb on + strand at 2794.616 kb on + strand at 2794.617 kb on - strand at 2794.617 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.032 mg/mL remove 2,791,933 - AO353_12680 0.12 +0.1 2,791,950 + AO353_12680 0.16 -2.2 2,791,950 + AO353_12680 0.16 -0.8 2,791,950 + AO353_12680 0.16 +0.9 2,791,950 + AO353_12680 0.16 +0.8 2,791,950 + AO353_12680 0.16 -0.5 2,791,950 + AO353_12680 0.16 -0.9 2,791,950 + AO353_12680 0.16 -0.7 2,791,951 - AO353_12680 0.16 +1.2 2,791,951 - AO353_12680 0.16 +0.9 2,791,951 - AO353_12680 0.16 -0.3 2,791,951 - AO353_12680 0.16 -1.3 2,792,008 + AO353_12680 0.26 +0.1 2,792,052 + AO353_12680 0.34 -0.8 2,792,052 + AO353_12680 0.34 -0.6 2,792,052 + AO353_12680 0.34 -0.8 2,792,052 + AO353_12680 0.34 +0.1 2,792,052 + AO353_12680 0.34 +0.1 2,792,053 - AO353_12680 0.34 -1.0 2,792,053 - AO353_12680 0.34 +1.1 2,792,053 - AO353_12680 0.34 -0.8 2,792,053 - AO353_12680 0.34 +0.7 2,792,349 + AO353_12680 0.89 +0.9 2,792,349 + AO353_12680 0.89 -0.2 2,792,364 + -2.0 2,792,365 - -0.8 2,792,432 + -1.1 2,792,432 + +1.7 2,792,433 - AO353_12685 0.10 -0.9 2,792,564 + AO353_12685 0.62 +1.2 2,792,769 - AO353_12690 0.38 -0.1 2,792,908 + +0.5 2,792,908 + -0.2 2,792,909 - -1.4 2,792,950 + +0.4 2,792,951 - +0.4 2,792,951 - +0.9 2,792,955 + +0.1 2,792,955 + +0.4 2,792,955 + -0.5 2,792,955 + +0.3 2,792,955 + +0.5 2,792,955 + +0.4 2,792,956 - +0.7 2,792,956 - +0.5 2,792,956 - -0.6 2,792,956 - +2.0 2,792,967 + -0.7 2,792,967 + -0.7 2,792,968 - -0.8 2,792,968 - -0.6 2,793,029 + AO353_12695 0.14 +0.3 2,793,029 + AO353_12695 0.14 -0.3 2,793,029 + AO353_12695 0.14 +0.7 2,793,029 + AO353_12695 0.14 +2.1 2,793,029 + AO353_12695 0.14 -1.1 2,793,029 + AO353_12695 0.14 -0.7 2,793,029 + AO353_12695 0.14 +0.4 2,793,029 + AO353_12695 0.14 -0.1 2,793,029 + AO353_12695 0.14 +0.7 2,793,030 - AO353_12695 0.15 +1.0 2,793,030 - AO353_12695 0.15 -1.8 2,793,030 - AO353_12695 0.15 +1.8 2,793,030 - AO353_12695 0.15 -0.5 2,793,030 - AO353_12695 0.15 +2.6 2,793,303 + AO353_12695 0.48 +0.0 2,793,304 - AO353_12695 0.48 +0.8 2,793,304 - AO353_12695 0.48 -0.6 2,793,304 - AO353_12695 0.48 +0.4 2,793,477 + AO353_12695 0.70 +2.2 2,793,477 + AO353_12695 0.70 +0.1 2,793,477 + AO353_12695 0.70 +0.3 2,793,477 + AO353_12695 0.70 -0.6 2,793,477 + AO353_12695 0.70 -0.7 2,793,477 + AO353_12695 0.70 -0.9 2,793,477 + AO353_12695 0.70 -0.8 2,793,477 + AO353_12695 0.70 +1.1 2,793,478 - AO353_12695 0.70 -0.6 2,793,478 - AO353_12695 0.70 +0.4 2,793,478 - AO353_12695 0.70 -1.2 2,793,538 + AO353_12695 0.77 +0.4 2,793,538 + AO353_12695 0.77 -0.6 2,793,539 - AO353_12695 0.77 -0.3 2,793,539 - AO353_12695 0.77 -0.9 2,793,675 + +1.3 2,793,675 + +1.8 2,793,675 + +0.9 2,793,675 + +0.4 2,793,675 + -0.4 2,793,691 + -0.1 2,793,721 + -1.3 2,793,721 + -1.4 2,793,721 + +0.3 2,793,722 - +0.5 2,793,722 - +1.3 2,793,722 - -1.5 2,793,816 + AO353_12700 0.17 -1.3 2,793,915 - AO353_12700 0.30 -1.1 2,793,915 - AO353_12700 0.30 +0.5 2,793,991 + AO353_12700 0.41 -1.6 2,793,991 + AO353_12700 0.41 -0.3 2,793,992 - AO353_12700 0.41 +0.9 2,793,992 - AO353_12700 0.41 +0.2 2,793,992 - AO353_12700 0.41 +1.3 2,793,992 - AO353_12700 0.41 +0.5 2,793,992 - AO353_12700 0.41 +1.4 2,794,236 + AO353_12700 0.75 +0.1 2,794,237 - AO353_12700 0.75 -0.4 2,794,237 - AO353_12700 0.75 +0.5 2,794,237 - AO353_12700 0.75 -0.5 2,794,237 - AO353_12700 0.75 +1.9 2,794,295 - AO353_12700 0.83 -0.5 2,794,540 + +0.3 2,794,540 + -0.1 2,794,540 + +0.6 2,794,540 + -1.3 2,794,540 + -0.5 2,794,540 + -0.5 2,794,540 + -0.8 2,794,541 - -0.7 2,794,541 - -0.5 2,794,541 - +0.2 2,794,616 + +0.1 2,794,616 + +1.4 2,794,617 - +0.9 2,794,617 - -0.1
Or see this region's nucleotide sequence