Experiment: Paraquat dichloride 0.032 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_09225 and AO353_09230 are separated by 5 nucleotides AO353_09230 and AO353_09235 are separated by 298 nucleotides AO353_09235 and AO353_09240 are separated by 38 nucleotides
AO353_09225: AO353_09225 - phosphopantothenoylcysteine decarboxylase, at 2,024,905 to 2,026,113
_09225
AO353_09230: AO353_09230 - deoxyuridine 5'-triphosphate nucleotidohydrolase, at 2,026,119 to 2,026,574
_09230
AO353_09235: AO353_09235 - phosphoglucomutase, at 2,026,873 to 2,028,270
_09235
AO353_09240: AO353_09240 - acetylglutamate kinase, at 2,028,309 to 2,029,214
_09240
Position (kb)
2026
2027
2028
2029 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2026.111 kb on + strand at 2026.111 kb on + strand at 2026.111 kb on + strand at 2026.575 kb on + strand at 2026.575 kb on + strand at 2026.575 kb on + strand at 2026.575 kb on + strand at 2026.575 kb on + strand at 2026.575 kb on + strand at 2026.576 kb on - strand at 2026.576 kb on - strand at 2026.576 kb on - strand at 2026.576 kb on - strand at 2026.576 kb on - strand at 2026.690 kb on + strand at 2026.690 kb on + strand at 2026.690 kb on + strand at 2026.690 kb on + strand at 2026.691 kb on - strand at 2026.691 kb on - strand at 2026.691 kb on - strand at 2026.691 kb on - strand at 2026.797 kb on + strand at 2026.797 kb on + strand at 2026.797 kb on + strand at 2026.797 kb on + strand at 2026.797 kb on + strand at 2026.797 kb on + strand at 2026.797 kb on + strand at 2026.797 kb on + strand at 2026.797 kb on + strand at 2026.797 kb on + strand at 2026.797 kb on + strand at 2026.797 kb on + strand at 2026.797 kb on + strand at 2026.797 kb on + strand at 2026.798 kb on - strand at 2026.798 kb on - strand at 2026.798 kb on - strand at 2026.798 kb on - strand at 2026.798 kb on - strand at 2026.798 kb on - strand at 2026.798 kb on - strand at 2026.798 kb on - strand at 2026.798 kb on - strand at 2026.798 kb on - strand at 2026.798 kb on - strand at 2026.798 kb on - strand at 2026.798 kb on - strand at 2026.798 kb on - strand at 2026.798 kb on - strand at 2026.798 kb on - strand at 2026.810 kb on + strand at 2026.928 kb on - strand at 2026.928 kb on - strand at 2026.933 kb on - strand at 2027.095 kb on + strand, within AO353_09235 at 2027.096 kb on - strand, within AO353_09235 at 2027.149 kb on + strand, within AO353_09235 at 2027.149 kb on + strand, within AO353_09235 at 2027.149 kb on + strand, within AO353_09235 at 2027.149 kb on + strand, within AO353_09235 at 2027.150 kb on - strand, within AO353_09235 at 2027.150 kb on - strand, within AO353_09235 at 2027.150 kb on - strand, within AO353_09235 at 2027.150 kb on - strand, within AO353_09235 at 2027.150 kb on - strand, within AO353_09235 at 2027.150 kb on - strand, within AO353_09235 at 2027.150 kb on - strand, within AO353_09235 at 2027.152 kb on + strand, within AO353_09235 at 2027.153 kb on - strand, within AO353_09235 at 2027.218 kb on + strand, within AO353_09235 at 2027.218 kb on + strand, within AO353_09235 at 2027.219 kb on - strand, within AO353_09235 at 2027.219 kb on - strand, within AO353_09235 at 2027.219 kb on - strand, within AO353_09235 at 2027.219 kb on - strand, within AO353_09235 at 2027.219 kb on - strand, within AO353_09235 at 2027.219 kb on - strand, within AO353_09235 at 2027.219 kb on - strand, within AO353_09235 at 2027.904 kb on + strand, within AO353_09235 at 2027.904 kb on + strand, within AO353_09235 at 2027.905 kb on - strand, within AO353_09235 at 2027.905 kb on - strand, within AO353_09235 at 2027.905 kb on - strand, within AO353_09235 at 2027.905 kb on - strand, within AO353_09235 at 2027.905 kb on - strand, within AO353_09235 at 2027.905 kb on - strand, within AO353_09235 at 2027.905 kb on - strand, within AO353_09235 at 2027.908 kb on + strand, within AO353_09235 at 2027.908 kb on + strand, within AO353_09235 at 2027.908 kb on + strand, within AO353_09235 at 2027.908 kb on + strand, within AO353_09235 at 2027.909 kb on - strand, within AO353_09235 at 2027.909 kb on - strand, within AO353_09235 at 2027.988 kb on + strand, within AO353_09235 at 2027.989 kb on - strand, within AO353_09235 at 2027.994 kb on + strand, within AO353_09235 at 2027.994 kb on + strand, within AO353_09235 at 2027.995 kb on - strand, within AO353_09235 at 2028.009 kb on + strand, within AO353_09235 at 2028.116 kb on - strand, within AO353_09235 at 2028.260 kb on + strand at 2028.260 kb on + strand at 2028.287 kb on + strand at 2028.288 kb on - strand at 2028.288 kb on - strand at 2028.369 kb on + strand at 2028.369 kb on + strand at 2028.369 kb on + strand at 2028.370 kb on - strand at 2028.370 kb on - strand at 2028.370 kb on - strand at 2028.370 kb on - strand at 2028.381 kb on + strand at 2028.408 kb on + strand, within AO353_09240 at 2028.409 kb on - strand, within AO353_09240 at 2028.888 kb on + strand, within AO353_09240 at 2028.888 kb on + strand, within AO353_09240 at 2028.888 kb on + strand, within AO353_09240 at 2028.888 kb on + strand, within AO353_09240 at 2028.889 kb on - strand, within AO353_09240 at 2029.053 kb on + strand, within AO353_09240 at 2029.053 kb on + strand, within AO353_09240 at 2029.096 kb on + strand, within AO353_09240 at 2029.212 kb on + strand at 2029.213 kb on - strand at 2029.213 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.032 mg/mL remove 2,026,111 + +0.1 2,026,111 + -0.6 2,026,111 + -0.0 2,026,575 + -1.1 2,026,575 + +1.0 2,026,575 + -1.5 2,026,575 + -0.4 2,026,575 + +0.3 2,026,575 + +1.0 2,026,576 - -0.1 2,026,576 - +0.2 2,026,576 - +2.1 2,026,576 - -0.6 2,026,576 - +0.8 2,026,690 + -0.4 2,026,690 + +1.5 2,026,690 + -0.8 2,026,690 + +0.9 2,026,691 - +0.3 2,026,691 - +1.9 2,026,691 - -0.7 2,026,691 - +0.6 2,026,797 + -0.1 2,026,797 + -1.2 2,026,797 + +0.3 2,026,797 + -0.0 2,026,797 + -0.4 2,026,797 + -0.1 2,026,797 + -0.6 2,026,797 + +0.6 2,026,797 + +0.6 2,026,797 + +0.5 2,026,797 + -0.8 2,026,797 + -0.9 2,026,797 + +1.4 2,026,797 + -1.0 2,026,798 - +0.2 2,026,798 - -1.7 2,026,798 - +1.4 2,026,798 - +0.4 2,026,798 - -1.5 2,026,798 - -0.3 2,026,798 - +1.0 2,026,798 - -0.5 2,026,798 - +0.3 2,026,798 - +0.1 2,026,798 - -1.7 2,026,798 - +1.8 2,026,798 - +0.4 2,026,798 - +0.8 2,026,798 - -1.7 2,026,798 - +0.2 2,026,810 + +2.4 2,026,928 - -0.7 2,026,928 - -1.1 2,026,933 - -1.8 2,027,095 + AO353_09235 0.16 -0.4 2,027,096 - AO353_09235 0.16 +0.9 2,027,149 + AO353_09235 0.20 -1.1 2,027,149 + AO353_09235 0.20 -0.7 2,027,149 + AO353_09235 0.20 -2.3 2,027,149 + AO353_09235 0.20 -0.9 2,027,150 - AO353_09235 0.20 -1.0 2,027,150 - AO353_09235 0.20 -1.1 2,027,150 - AO353_09235 0.20 -2.1 2,027,150 - AO353_09235 0.20 +1.1 2,027,150 - AO353_09235 0.20 -1.1 2,027,150 - AO353_09235 0.20 -0.9 2,027,150 - AO353_09235 0.20 -2.0 2,027,152 + AO353_09235 0.20 -0.2 2,027,153 - AO353_09235 0.20 -1.4 2,027,218 + AO353_09235 0.25 -1.1 2,027,218 + AO353_09235 0.25 -0.9 2,027,219 - AO353_09235 0.25 -2.9 2,027,219 - AO353_09235 0.25 -0.7 2,027,219 - AO353_09235 0.25 -0.7 2,027,219 - AO353_09235 0.25 -0.8 2,027,219 - AO353_09235 0.25 +0.1 2,027,219 - AO353_09235 0.25 -0.5 2,027,219 - AO353_09235 0.25 -1.4 2,027,904 + AO353_09235 0.74 -0.4 2,027,904 + AO353_09235 0.74 -1.6 2,027,905 - AO353_09235 0.74 -2.3 2,027,905 - AO353_09235 0.74 -1.2 2,027,905 - AO353_09235 0.74 +0.1 2,027,905 - AO353_09235 0.74 -0.1 2,027,905 - AO353_09235 0.74 -0.8 2,027,905 - AO353_09235 0.74 -1.1 2,027,905 - AO353_09235 0.74 -0.5 2,027,908 + AO353_09235 0.74 +0.7 2,027,908 + AO353_09235 0.74 -0.7 2,027,908 + AO353_09235 0.74 -0.7 2,027,908 + AO353_09235 0.74 -1.2 2,027,909 - AO353_09235 0.74 -0.5 2,027,909 - AO353_09235 0.74 -1.1 2,027,988 + AO353_09235 0.80 -0.4 2,027,989 - AO353_09235 0.80 -0.0 2,027,994 + AO353_09235 0.80 -0.0 2,027,994 + AO353_09235 0.80 -0.0 2,027,995 - AO353_09235 0.80 -2.5 2,028,009 + AO353_09235 0.81 -0.5 2,028,116 - AO353_09235 0.89 -1.2 2,028,260 + -0.8 2,028,260 + -0.4 2,028,287 + +1.1 2,028,288 - -0.9 2,028,288 - -0.9 2,028,369 + +0.7 2,028,369 + -0.2 2,028,369 + -0.6 2,028,370 - -0.4 2,028,370 - -0.4 2,028,370 - -1.4 2,028,370 - -0.9 2,028,381 + +1.5 2,028,408 + AO353_09240 0.11 +1.2 2,028,409 - AO353_09240 0.11 -0.9 2,028,888 + AO353_09240 0.64 -0.6 2,028,888 + AO353_09240 0.64 -0.7 2,028,888 + AO353_09240 0.64 -1.0 2,028,888 + AO353_09240 0.64 -0.5 2,028,889 - AO353_09240 0.64 -0.6 2,029,053 + AO353_09240 0.82 +0.3 2,029,053 + AO353_09240 0.82 -1.1 2,029,096 + AO353_09240 0.87 -1.9 2,029,212 + -1.3 2,029,213 - -1.1 2,029,213 - +1.1
Or see this region's nucleotide sequence