Experiment: Paraquat dichloride 0.032 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_03405 and AO353_03410 overlap by 11 nucleotides AO353_03410 and AO353_03415 are separated by 206 nucleotides AO353_03415 and AO353_03420 overlap by 4 nucleotides
AO353_03405: AO353_03405 - histidine kinase, at 725,463 to 726,926
_03405
AO353_03410: AO353_03410 - chemotaxis protein CheY, at 726,916 to 727,647
_03410
AO353_03415: AO353_03415 - glucokinase, at 727,854 to 728,804
_03415
AO353_03420: AO353_03420 - phosphogluconate dehydratase, at 728,801 to 730,627
_03420
Position (kb) 727
728
729 Strain fitness (log2 ratio) -2
-1
0
1
2 at 726.937 kb on + strand at 726.937 kb on + strand at 726.938 kb on - strand at 726.938 kb on - strand at 726.938 kb on - strand at 727.280 kb on - strand, within AO353_03410 at 727.280 kb on - strand, within AO353_03410 at 727.334 kb on + strand, within AO353_03410 at 727.335 kb on - strand, within AO353_03410 at 727.577 kb on + strand at 727.577 kb on + strand at 727.578 kb on - strand at 727.578 kb on - strand at 727.578 kb on - strand at 727.578 kb on - strand at 727.578 kb on - strand at 727.578 kb on - strand at 727.597 kb on + strand at 727.597 kb on + strand at 727.667 kb on + strand at 727.667 kb on + strand at 727.667 kb on + strand at 727.667 kb on + strand at 727.667 kb on + strand at 727.683 kb on + strand at 727.683 kb on + strand at 727.684 kb on - strand at 727.684 kb on - strand at 727.852 kb on + strand at 727.852 kb on + strand at 727.852 kb on + strand at 727.852 kb on + strand at 727.897 kb on + strand at 727.898 kb on - strand at 727.936 kb on + strand at 727.936 kb on + strand at 727.936 kb on + strand at 727.937 kb on - strand at 727.937 kb on - strand at 727.937 kb on - strand at 727.937 kb on - strand at 727.937 kb on - strand at 727.937 kb on - strand at 727.937 kb on - strand at 728.029 kb on + strand at 728.029 kb on + strand, within AO353_03415 at 728.029 kb on + strand, within AO353_03415 at 728.029 kb on + strand, within AO353_03415 at 728.029 kb on + strand, within AO353_03415 at 728.029 kb on + strand, within AO353_03415 at 728.029 kb on + strand, within AO353_03415 at 728.029 kb on + strand, within AO353_03415 at 728.030 kb on - strand, within AO353_03415 at 728.030 kb on - strand, within AO353_03415 at 728.030 kb on - strand, within AO353_03415 at 728.030 kb on - strand, within AO353_03415 at 728.030 kb on - strand, within AO353_03415 at 728.030 kb on - strand, within AO353_03415 at 728.030 kb on - strand, within AO353_03415 at 728.207 kb on - strand, within AO353_03415 at 728.269 kb on + strand, within AO353_03415 at 728.269 kb on + strand, within AO353_03415 at 728.270 kb on - strand, within AO353_03415 at 728.270 kb on - strand, within AO353_03415 at 728.270 kb on - strand, within AO353_03415 at 728.270 kb on - strand, within AO353_03415 at 728.582 kb on + strand, within AO353_03415 at 728.582 kb on + strand, within AO353_03415 at 728.671 kb on + strand, within AO353_03415 at 728.671 kb on + strand, within AO353_03415 at 728.672 kb on - strand, within AO353_03415 at 728.701 kb on + strand at 728.701 kb on + strand, within AO353_03415 at 728.701 kb on + strand, within AO353_03415 at 728.701 kb on + strand, within AO353_03415 at 728.796 kb on + strand at 728.797 kb on - strand at 728.797 kb on - strand at 728.797 kb on - strand at 728.797 kb on - strand at 728.797 kb on - strand at 728.806 kb on + strand at 728.806 kb on + strand at 728.806 kb on + strand at 728.806 kb on + strand at 728.807 kb on - strand at 728.807 kb on - strand at 728.807 kb on - strand at 728.827 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.032 mg/mL remove 726,937 + +1.5 726,937 + -2.2 726,938 - +0.5 726,938 - +0.9 726,938 - +0.4 727,280 - AO353_03410 0.50 -2.1 727,280 - AO353_03410 0.50 -0.1 727,334 + AO353_03410 0.57 -1.8 727,335 - AO353_03410 0.57 +0.3 727,577 + +0.9 727,577 + +1.2 727,578 - -0.5 727,578 - +0.6 727,578 - +0.6 727,578 - -1.8 727,578 - +0.5 727,578 - +0.1 727,597 + +0.8 727,597 + +0.4 727,667 + +1.0 727,667 + +0.0 727,667 + +0.3 727,667 + -1.4 727,667 + +1.6 727,683 + +1.0 727,683 + +0.4 727,684 - +0.9 727,684 - +1.6 727,852 + -0.8 727,852 + +0.6 727,852 + -0.2 727,852 + +1.1 727,897 + +1.8 727,898 - -1.0 727,936 + -0.8 727,936 + -0.5 727,936 + -0.7 727,937 - -0.2 727,937 - -0.7 727,937 - +0.5 727,937 - +1.0 727,937 - +0.5 727,937 - +0.6 727,937 - -0.9 728,029 + +0.6 728,029 + AO353_03415 0.18 +0.1 728,029 + AO353_03415 0.18 +0.3 728,029 + AO353_03415 0.18 -1.1 728,029 + AO353_03415 0.18 -0.0 728,029 + AO353_03415 0.18 -0.4 728,029 + AO353_03415 0.18 +1.9 728,029 + AO353_03415 0.18 +1.8 728,030 - AO353_03415 0.19 -0.1 728,030 - AO353_03415 0.19 +0.6 728,030 - AO353_03415 0.19 +0.5 728,030 - AO353_03415 0.19 +1.3 728,030 - AO353_03415 0.19 -0.7 728,030 - AO353_03415 0.19 -0.4 728,030 - AO353_03415 0.19 -0.6 728,207 - AO353_03415 0.37 +0.6 728,269 + AO353_03415 0.44 +0.3 728,269 + AO353_03415 0.44 +1.5 728,270 - AO353_03415 0.44 +0.2 728,270 - AO353_03415 0.44 -1.7 728,270 - AO353_03415 0.44 -0.9 728,270 - AO353_03415 0.44 +2.2 728,582 + AO353_03415 0.77 -1.1 728,582 + AO353_03415 0.77 +2.1 728,671 + AO353_03415 0.86 +0.0 728,671 + AO353_03415 0.86 -1.0 728,672 - AO353_03415 0.86 -0.1 728,701 + +1.8 728,701 + AO353_03415 0.89 -0.9 728,701 + AO353_03415 0.89 +0.6 728,701 + AO353_03415 0.89 -0.7 728,796 + -0.4 728,797 - +0.5 728,797 - +1.3 728,797 - +0.6 728,797 - -0.0 728,797 - -0.2 728,806 + +1.2 728,806 + +0.3 728,806 + -0.1 728,806 + -0.4 728,807 - +0.3 728,807 - +0.8 728,807 - +0.4 728,827 + -1.0
Or see this region's nucleotide sequence