Experiment: Paraquat dichloride 0.032 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_00350 and AO353_00355 are separated by 155 nucleotides AO353_00355 and AO353_00360 overlap by 1 nucleotides AO353_00360 and AO353_00365 are separated by 58 nucleotides
AO353_00350: AO353_00350 - copper-binding protein, at 63,488 to 64,045
_00350
AO353_00355: AO353_00355 - transcriptional regulator, at 64,201 to 64,881
_00355
AO353_00360: AO353_00360 - ATPase, at 64,881 to 66,242
_00360
AO353_00365: AO353_00365 - multidrug ABC transporter substrate-binding protein, at 66,301 to 67,545
_00365
Position (kb) 64
65
66
67 Strain fitness (log2 ratio) -2
-1
0
1
2 at 63.898 kb on + strand, within AO353_00350 at 63.898 kb on + strand, within AO353_00350 at 63.898 kb on + strand, within AO353_00350 at 63.898 kb on + strand, within AO353_00350 at 63.898 kb on + strand, within AO353_00350 at 63.899 kb on - strand, within AO353_00350 at 63.899 kb on - strand, within AO353_00350 at 63.899 kb on - strand, within AO353_00350 at 63.899 kb on - strand, within AO353_00350 at 63.899 kb on - strand, within AO353_00350 at 63.899 kb on - strand, within AO353_00350 at 63.963 kb on + strand, within AO353_00350 at 63.963 kb on + strand, within AO353_00350 at 63.963 kb on + strand, within AO353_00350 at 63.963 kb on + strand, within AO353_00350 at 63.963 kb on + strand, within AO353_00350 at 63.964 kb on - strand, within AO353_00350 at 63.964 kb on - strand, within AO353_00350 at 63.964 kb on - strand, within AO353_00350 at 64.022 kb on + strand at 64.023 kb on - strand at 64.088 kb on + strand at 64.088 kb on + strand at 64.089 kb on - strand at 64.089 kb on - strand at 64.091 kb on + strand at 64.091 kb on + strand at 64.091 kb on + strand at 64.091 kb on + strand at 64.091 kb on + strand at 64.091 kb on + strand at 64.092 kb on - strand at 64.092 kb on - strand at 64.125 kb on + strand at 64.125 kb on + strand at 64.126 kb on - strand at 64.126 kb on - strand at 64.126 kb on - strand at 64.136 kb on - strand at 64.136 kb on - strand at 64.166 kb on + strand at 64.166 kb on + strand at 64.166 kb on + strand at 64.166 kb on + strand at 64.167 kb on - strand at 64.167 kb on - strand at 64.168 kb on + strand at 64.197 kb on - strand at 64.243 kb on + strand at 64.243 kb on + strand at 64.243 kb on + strand at 64.244 kb on - strand at 64.244 kb on - strand at 64.244 kb on - strand at 64.333 kb on + strand, within AO353_00355 at 64.334 kb on - strand, within AO353_00355 at 64.493 kb on - strand, within AO353_00355 at 64.547 kb on + strand, within AO353_00355 at 64.547 kb on + strand, within AO353_00355 at 64.547 kb on + strand, within AO353_00355 at 64.548 kb on - strand, within AO353_00355 at 64.836 kb on + strand at 64.841 kb on + strand at 64.842 kb on - strand at 64.856 kb on - strand at 65.242 kb on - strand, within AO353_00360 at 65.250 kb on + strand, within AO353_00360 at 65.250 kb on + strand, within AO353_00360 at 65.251 kb on - strand, within AO353_00360 at 65.538 kb on - strand, within AO353_00360 at 65.682 kb on + strand, within AO353_00360 at 65.751 kb on + strand, within AO353_00360 at 65.751 kb on + strand, within AO353_00360 at 65.751 kb on + strand, within AO353_00360 at 65.752 kb on - strand, within AO353_00360 at 65.752 kb on - strand, within AO353_00360 at 65.838 kb on + strand, within AO353_00360 at 65.839 kb on - strand, within AO353_00360 at 65.839 kb on - strand, within AO353_00360 at 65.839 kb on - strand, within AO353_00360 at 66.084 kb on + strand, within AO353_00360 at 66.085 kb on - strand, within AO353_00360 at 66.302 kb on + strand at 66.302 kb on + strand at 66.302 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.032 mg/mL remove 63,898 + AO353_00350 0.73 +2.1 63,898 + AO353_00350 0.73 -0.3 63,898 + AO353_00350 0.73 +1.0 63,898 + AO353_00350 0.73 +1.3 63,898 + AO353_00350 0.73 -0.2 63,899 - AO353_00350 0.74 +0.7 63,899 - AO353_00350 0.74 +0.2 63,899 - AO353_00350 0.74 +0.6 63,899 - AO353_00350 0.74 -0.3 63,899 - AO353_00350 0.74 +0.1 63,899 - AO353_00350 0.74 +0.5 63,963 + AO353_00350 0.85 +1.1 63,963 + AO353_00350 0.85 +0.3 63,963 + AO353_00350 0.85 +1.7 63,963 + AO353_00350 0.85 -1.2 63,963 + AO353_00350 0.85 -1.0 63,964 - AO353_00350 0.85 -1.5 63,964 - AO353_00350 0.85 -0.2 63,964 - AO353_00350 0.85 -0.0 64,022 + -0.1 64,023 - -0.5 64,088 + +0.8 64,088 + -1.0 64,089 - +0.2 64,089 - +0.8 64,091 + +0.3 64,091 + +1.4 64,091 + +0.2 64,091 + -0.1 64,091 + -0.0 64,091 + +0.5 64,092 - +1.0 64,092 - -0.0 64,125 + -2.3 64,125 + -0.7 64,126 - -1.0 64,126 - -0.8 64,126 - -1.3 64,136 - +1.5 64,136 - +0.7 64,166 + -0.3 64,166 + -0.3 64,166 + -0.1 64,166 + -1.6 64,167 - -0.5 64,167 - -0.3 64,168 + +0.6 64,197 - +0.4 64,243 + +0.1 64,243 + -0.1 64,243 + +0.8 64,244 - -0.3 64,244 - -0.7 64,244 - -0.5 64,333 + AO353_00355 0.19 +0.7 64,334 - AO353_00355 0.20 -1.3 64,493 - AO353_00355 0.43 -0.7 64,547 + AO353_00355 0.51 -1.8 64,547 + AO353_00355 0.51 +0.1 64,547 + AO353_00355 0.51 +0.5 64,548 - AO353_00355 0.51 -0.1 64,836 + +2.7 64,841 + +0.8 64,842 - +1.1 64,856 - +0.3 65,242 - AO353_00360 0.27 +0.1 65,250 + AO353_00360 0.27 +1.5 65,250 + AO353_00360 0.27 +0.2 65,251 - AO353_00360 0.27 +0.6 65,538 - AO353_00360 0.48 +0.8 65,682 + AO353_00360 0.59 +1.1 65,751 + AO353_00360 0.64 -0.3 65,751 + AO353_00360 0.64 -1.9 65,751 + AO353_00360 0.64 -1.0 65,752 - AO353_00360 0.64 +1.2 65,752 - AO353_00360 0.64 -1.5 65,838 + AO353_00360 0.70 -0.2 65,839 - AO353_00360 0.70 -0.4 65,839 - AO353_00360 0.70 +0.1 65,839 - AO353_00360 0.70 +0.8 66,084 + AO353_00360 0.88 -0.0 66,085 - AO353_00360 0.88 +0.7 66,302 + -0.9 66,302 + +0.3 66,302 + -0.6
Or see this region's nucleotide sequence