Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS20895 and ABZR86_RS20900 are separated by 76 nucleotides ABZR86_RS20900 and ABZR86_RS20905 are separated by 76 nucleotides ABZR86_RS20905 and ABZR86_RS20910 overlap by 4 nucleotides
ABZR86_RS20895: ABZR86_RS20895 - hypothetical protein, at 148,835 to 149,572
_RS20895
ABZR86_RS20900: ABZR86_RS20900 - transporter, at 149,649 to 150,485
_RS20900
ABZR86_RS20905: ABZR86_RS20905 - nuclear transport factor 2 family protein, at 150,562 to 151,263
_RS20905
ABZR86_RS20910: ABZR86_RS20910 - AraC family transcriptional regulator, at 151,260 to 151,934
_RS20910
Position (kb) 149
150
151 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 148.790 kb on + strand at 148.791 kb on - strand at 148.982 kb on + strand, within ABZR86_RS20895 at 148.982 kb on + strand, within ABZR86_RS20895 at 149.584 kb on - strand at 149.760 kb on + strand, within ABZR86_RS20900 at 149.761 kb on - strand, within ABZR86_RS20900 at 149.761 kb on - strand, within ABZR86_RS20900 at 149.761 kb on - strand, within ABZR86_RS20900 at 149.775 kb on + strand, within ABZR86_RS20900 at 149.775 kb on + strand, within ABZR86_RS20900 at 149.775 kb on + strand, within ABZR86_RS20900 at 149.776 kb on - strand, within ABZR86_RS20900 at 149.865 kb on + strand, within ABZR86_RS20900 at 149.866 kb on - strand, within ABZR86_RS20900 at 149.867 kb on + strand, within ABZR86_RS20900 at 150.040 kb on - strand, within ABZR86_RS20900 at 150.048 kb on + strand, within ABZR86_RS20900 at 150.148 kb on - strand, within ABZR86_RS20900 at 150.168 kb on + strand, within ABZR86_RS20900 at 150.168 kb on + strand, within ABZR86_RS20900 at 150.169 kb on - strand, within ABZR86_RS20900 at 150.169 kb on - strand, within ABZR86_RS20900 at 150.169 kb on - strand, within ABZR86_RS20900 at 150.211 kb on - strand, within ABZR86_RS20900 at 150.234 kb on + strand, within ABZR86_RS20900 at 150.315 kb on + strand, within ABZR86_RS20900 at 150.315 kb on + strand, within ABZR86_RS20900 at 150.316 kb on - strand, within ABZR86_RS20900 at 150.316 kb on - strand, within ABZR86_RS20900 at 150.316 kb on - strand, within ABZR86_RS20900 at 150.316 kb on - strand, within ABZR86_RS20900 at 150.316 kb on - strand, within ABZR86_RS20900 at 150.376 kb on - strand, within ABZR86_RS20900 at 150.382 kb on - strand, within ABZR86_RS20900 at 150.414 kb on + strand at 150.415 kb on - strand at 150.415 kb on - strand at 150.415 kb on - strand at 150.415 kb on - strand at 150.474 kb on + strand at 150.474 kb on + strand at 150.768 kb on - strand, within ABZR86_RS20905 at 150.803 kb on + strand, within ABZR86_RS20905 at 150.803 kb on + strand, within ABZR86_RS20905 at 150.860 kb on + strand, within ABZR86_RS20905 at 150.861 kb on - strand, within ABZR86_RS20905 at 150.924 kb on - strand, within ABZR86_RS20905 at 150.924 kb on - strand, within ABZR86_RS20905 at 150.924 kb on - strand, within ABZR86_RS20905 at 151.112 kb on + strand, within ABZR86_RS20905
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 148,790 + -1.3 148,791 - -1.6 148,982 + ABZR86_RS20895 0.20 -0.1 148,982 + ABZR86_RS20895 0.20 -0.2 149,584 - +1.5 149,760 + ABZR86_RS20900 0.13 -1.3 149,761 - ABZR86_RS20900 0.13 +0.8 149,761 - ABZR86_RS20900 0.13 +0.8 149,761 - ABZR86_RS20900 0.13 -0.3 149,775 + ABZR86_RS20900 0.15 +0.4 149,775 + ABZR86_RS20900 0.15 -0.4 149,775 + ABZR86_RS20900 0.15 -1.4 149,776 - ABZR86_RS20900 0.15 +0.4 149,865 + ABZR86_RS20900 0.26 +0.3 149,866 - ABZR86_RS20900 0.26 -0.7 149,867 + ABZR86_RS20900 0.26 -1.8 150,040 - ABZR86_RS20900 0.47 +1.2 150,048 + ABZR86_RS20900 0.48 +0.5 150,148 - ABZR86_RS20900 0.60 +0.9 150,168 + ABZR86_RS20900 0.62 -1.0 150,168 + ABZR86_RS20900 0.62 +0.3 150,169 - ABZR86_RS20900 0.62 +0.2 150,169 - ABZR86_RS20900 0.62 +1.4 150,169 - ABZR86_RS20900 0.62 +0.8 150,211 - ABZR86_RS20900 0.67 +1.6 150,234 + ABZR86_RS20900 0.70 +1.4 150,315 + ABZR86_RS20900 0.80 +1.5 150,315 + ABZR86_RS20900 0.80 +0.8 150,316 - ABZR86_RS20900 0.80 -0.5 150,316 - ABZR86_RS20900 0.80 +1.0 150,316 - ABZR86_RS20900 0.80 -0.4 150,316 - ABZR86_RS20900 0.80 -0.7 150,316 - ABZR86_RS20900 0.80 -1.1 150,376 - ABZR86_RS20900 0.87 +0.1 150,382 - ABZR86_RS20900 0.88 +3.3 150,414 + +0.2 150,415 - +0.6 150,415 - +1.4 150,415 - -0.4 150,415 - -2.6 150,474 + +0.2 150,474 + +0.7 150,768 - ABZR86_RS20905 0.29 -0.3 150,803 + ABZR86_RS20905 0.34 -1.8 150,803 + ABZR86_RS20905 0.34 +3.1 150,860 + ABZR86_RS20905 0.42 -1.3 150,861 - ABZR86_RS20905 0.43 -3.3 150,924 - ABZR86_RS20905 0.52 +0.6 150,924 - ABZR86_RS20905 0.52 -1.0 150,924 - ABZR86_RS20905 0.52 +0.9 151,112 + ABZR86_RS20905 0.78 -0.1
Or see this region's nucleotide sequence