Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS18125 and ABZR86_RS18130 are separated by 190 nucleotides ABZR86_RS18130 and ABZR86_RS18135 are separated by 40 nucleotides ABZR86_RS18135 and ABZR86_RS18140 are separated by 200 nucleotides
ABZR86_RS18125: ABZR86_RS18125 - zinc-binding alcohol dehydrogenase family protein, at 39,578 to 40,591
_RS18125
ABZR86_RS18130: ABZR86_RS18130 - FAD/NAD(P)-binding protein, at 40,782 to 42,149
_RS18130
ABZR86_RS18135: ABZR86_RS18135 - cysteine dioxygenase family protein, at 42,190 to 42,759
_RS18135
ABZR86_RS18140: ABZR86_RS18140 - hypothetical protein, at 42,960 to 43,247
_RS18140
Position (kb) 40
41
42
43 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 39.787 kb on - strand, within ABZR86_RS18125 at 39.836 kb on + strand, within ABZR86_RS18125 at 39.836 kb on + strand, within ABZR86_RS18125 at 39.837 kb on - strand, within ABZR86_RS18125 at 39.839 kb on + strand, within ABZR86_RS18125 at 39.839 kb on + strand, within ABZR86_RS18125 at 39.840 kb on - strand, within ABZR86_RS18125 at 40.232 kb on + strand, within ABZR86_RS18125 at 40.232 kb on + strand, within ABZR86_RS18125 at 40.232 kb on + strand, within ABZR86_RS18125 at 40.232 kb on + strand, within ABZR86_RS18125 at 40.232 kb on + strand, within ABZR86_RS18125 at 40.232 kb on + strand, within ABZR86_RS18125 at 40.233 kb on - strand, within ABZR86_RS18125 at 40.233 kb on - strand, within ABZR86_RS18125 at 40.233 kb on - strand, within ABZR86_RS18125 at 40.233 kb on - strand, within ABZR86_RS18125 at 40.233 kb on - strand, within ABZR86_RS18125 at 40.233 kb on - strand, within ABZR86_RS18125 at 40.233 kb on - strand, within ABZR86_RS18125 at 40.246 kb on + strand, within ABZR86_RS18125 at 40.247 kb on - strand, within ABZR86_RS18125 at 40.247 kb on - strand, within ABZR86_RS18125 at 40.247 kb on - strand, within ABZR86_RS18125 at 40.688 kb on - strand at 40.688 kb on - strand at 40.688 kb on - strand at 40.689 kb on + strand at 40.689 kb on + strand at 40.690 kb on - strand at 40.690 kb on - strand at 40.690 kb on - strand at 40.690 kb on - strand at 40.767 kb on + strand at 40.768 kb on - strand at 40.768 kb on - strand at 41.632 kb on + strand, within ABZR86_RS18130 at 41.632 kb on + strand, within ABZR86_RS18130 at 41.633 kb on - strand, within ABZR86_RS18130 at 41.633 kb on - strand, within ABZR86_RS18130 at 41.858 kb on - strand, within ABZR86_RS18130 at 41.858 kb on - strand, within ABZR86_RS18130 at 42.145 kb on + strand at 42.145 kb on + strand at 42.145 kb on + strand at 42.145 kb on + strand at 42.145 kb on + strand at 42.146 kb on - strand at 42.146 kb on - strand at 42.266 kb on + strand, within ABZR86_RS18135 at 42.266 kb on + strand, within ABZR86_RS18135 at 42.267 kb on - strand, within ABZR86_RS18135 at 42.267 kb on - strand, within ABZR86_RS18135 at 42.267 kb on - strand, within ABZR86_RS18135 at 42.276 kb on - strand, within ABZR86_RS18135 at 42.276 kb on - strand, within ABZR86_RS18135 at 42.276 kb on - strand, within ABZR86_RS18135 at 42.310 kb on - strand, within ABZR86_RS18135 at 42.831 kb on - strand at 42.864 kb on + strand at 42.864 kb on + strand at 42.864 kb on + strand at 42.864 kb on + strand at 42.864 kb on + strand at 42.865 kb on - strand at 42.865 kb on - strand at 42.865 kb on - strand at 42.865 kb on - strand at 42.874 kb on - strand at 42.874 kb on - strand at 42.970 kb on + strand at 42.970 kb on + strand at 43.063 kb on + strand, within ABZR86_RS18140
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 39,787 - ABZR86_RS18125 0.21 +0.1 39,836 + ABZR86_RS18125 0.25 -0.0 39,836 + ABZR86_RS18125 0.25 +1.5 39,837 - ABZR86_RS18125 0.26 -0.3 39,839 + ABZR86_RS18125 0.26 +1.0 39,839 + ABZR86_RS18125 0.26 -2.4 39,840 - ABZR86_RS18125 0.26 -3.0 40,232 + ABZR86_RS18125 0.64 -1.4 40,232 + ABZR86_RS18125 0.64 -1.3 40,232 + ABZR86_RS18125 0.64 -2.5 40,232 + ABZR86_RS18125 0.64 +0.2 40,232 + ABZR86_RS18125 0.64 +0.5 40,232 + ABZR86_RS18125 0.64 -0.6 40,233 - ABZR86_RS18125 0.65 -2.8 40,233 - ABZR86_RS18125 0.65 +0.0 40,233 - ABZR86_RS18125 0.65 +1.0 40,233 - ABZR86_RS18125 0.65 -0.0 40,233 - ABZR86_RS18125 0.65 +0.1 40,233 - ABZR86_RS18125 0.65 +1.2 40,233 - ABZR86_RS18125 0.65 -1.9 40,246 + ABZR86_RS18125 0.66 +0.0 40,247 - ABZR86_RS18125 0.66 -1.3 40,247 - ABZR86_RS18125 0.66 +0.7 40,247 - ABZR86_RS18125 0.66 -0.2 40,688 - +0.7 40,688 - +0.4 40,688 - -1.1 40,689 + -0.3 40,689 + -1.1 40,690 - -0.2 40,690 - +0.5 40,690 - +0.3 40,690 - +0.5 40,767 + +1.3 40,768 - -1.3 40,768 - -2.3 41,632 + ABZR86_RS18130 0.62 -2.6 41,632 + ABZR86_RS18130 0.62 +1.3 41,633 - ABZR86_RS18130 0.62 +1.5 41,633 - ABZR86_RS18130 0.62 +1.2 41,858 - ABZR86_RS18130 0.79 -0.7 41,858 - ABZR86_RS18130 0.79 +0.1 42,145 + -0.7 42,145 + +0.3 42,145 + -1.6 42,145 + +0.7 42,145 + -0.1 42,146 - +1.0 42,146 - -0.6 42,266 + ABZR86_RS18135 0.13 -4.0 42,266 + ABZR86_RS18135 0.13 -0.8 42,267 - ABZR86_RS18135 0.14 -0.2 42,267 - ABZR86_RS18135 0.14 -3.3 42,267 - ABZR86_RS18135 0.14 +1.0 42,276 - ABZR86_RS18135 0.15 -1.7 42,276 - ABZR86_RS18135 0.15 -2.4 42,276 - ABZR86_RS18135 0.15 +0.1 42,310 - ABZR86_RS18135 0.21 -0.6 42,831 - -1.1 42,864 + -1.3 42,864 + -1.1 42,864 + +0.7 42,864 + +0.0 42,864 + +0.1 42,865 - -0.8 42,865 - -0.2 42,865 - -1.5 42,865 - +0.3 42,874 - -0.5 42,874 - +0.1 42,970 + -0.6 42,970 + -0.1 43,063 + ABZR86_RS18140 0.36 +0.7
Or see this region's nucleotide sequence