Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS17640

Experiment: D-Fructose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS17635 and ABZR86_RS17640 are separated by 145 nucleotidesABZR86_RS17640 and ABZR86_RS17645 are separated by 81 nucleotidesABZR86_RS17645 and ABZR86_RS17650 are separated by 36 nucleotidesABZR86_RS17650 and ABZR86_RS17655 are separated by 10 nucleotides ABZR86_RS17635: ABZR86_RS17635 - hypothetical protein, at 3,984,018 to 3,984,947 _RS17635 ABZR86_RS17640: ABZR86_RS17640 - hypothetical protein, at 3,985,093 to 3,986,178 _RS17640 ABZR86_RS17645: ABZR86_RS17645 - hypothetical protein, at 3,986,260 to 3,986,757 _RS17645 ABZR86_RS17650: ABZR86_RS17650 - ADP-ribosylglycohydrolase family protein, at 3,986,794 to 3,986,982 _RS17650 ABZR86_RS17655: ABZR86_RS17655 - hypothetical protein, at 3,986,993 to 3,987,466 _RS17655 Position (kb) 3985 3986 3987Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 3984.140 kb on + strand, within ABZR86_RS17635at 3984.140 kb on + strand, within ABZR86_RS17635at 3984.141 kb on - strand, within ABZR86_RS17635at 3984.209 kb on - strand, within ABZR86_RS17635at 3984.267 kb on + strand, within ABZR86_RS17635at 3984.267 kb on + strand, within ABZR86_RS17635at 3984.267 kb on + strand, within ABZR86_RS17635at 3984.267 kb on + strand, within ABZR86_RS17635at 3984.268 kb on - strand, within ABZR86_RS17635at 3984.360 kb on - strand, within ABZR86_RS17635at 3984.374 kb on + strand, within ABZR86_RS17635at 3984.375 kb on - strand, within ABZR86_RS17635at 3984.376 kb on + strand, within ABZR86_RS17635at 3984.376 kb on + strand, within ABZR86_RS17635at 3984.376 kb on + strand, within ABZR86_RS17635at 3984.376 kb on + strand, within ABZR86_RS17635at 3984.377 kb on - strand, within ABZR86_RS17635at 3984.462 kb on + strand, within ABZR86_RS17635at 3984.516 kb on + strand, within ABZR86_RS17635at 3984.517 kb on - strand, within ABZR86_RS17635at 3984.559 kb on - strand, within ABZR86_RS17635at 3984.574 kb on + strand, within ABZR86_RS17635at 3984.574 kb on + strand, within ABZR86_RS17635at 3984.575 kb on - strand, within ABZR86_RS17635at 3984.575 kb on - strand, within ABZR86_RS17635at 3984.603 kb on + strand, within ABZR86_RS17635at 3984.603 kb on + strand, within ABZR86_RS17635at 3984.604 kb on - strand, within ABZR86_RS17635at 3984.605 kb on + strand, within ABZR86_RS17635at 3984.605 kb on + strand, within ABZR86_RS17635at 3984.605 kb on + strand, within ABZR86_RS17635at 3984.607 kb on + strand, within ABZR86_RS17635at 3984.607 kb on + strand, within ABZR86_RS17635at 3984.607 kb on + strand, within ABZR86_RS17635at 3984.607 kb on + strand, within ABZR86_RS17635at 3984.608 kb on - strand, within ABZR86_RS17635at 3984.608 kb on - strand, within ABZR86_RS17635at 3984.608 kb on - strand, within ABZR86_RS17635at 3984.608 kb on - strand, within ABZR86_RS17635at 3984.643 kb on + strand, within ABZR86_RS17635at 3984.644 kb on - strand, within ABZR86_RS17635at 3984.644 kb on - strand, within ABZR86_RS17635at 3984.644 kb on - strand, within ABZR86_RS17635at 3984.644 kb on - strand, within ABZR86_RS17635at 3984.714 kb on + strand, within ABZR86_RS17635at 3984.714 kb on + strand, within ABZR86_RS17635at 3984.715 kb on - strand, within ABZR86_RS17635at 3984.723 kb on + strand, within ABZR86_RS17635at 3984.723 kb on + strand, within ABZR86_RS17635at 3984.724 kb on - strand, within ABZR86_RS17635at 3984.766 kb on - strand, within ABZR86_RS17635at 3984.802 kb on - strand, within ABZR86_RS17635at 3984.802 kb on - strand, within ABZR86_RS17635at 3984.802 kb on - strand, within ABZR86_RS17635at 3984.802 kb on - strand, within ABZR86_RS17635at 3984.996 kb on + strandat 3984.996 kb on + strandat 3985.006 kb on + strandat 3985.010 kb on - strandat 3985.069 kb on + strandat 3985.069 kb on + strandat 3985.070 kb on - strandat 3985.070 kb on - strandat 3985.086 kb on - strandat 3985.101 kb on + strandat 3985.101 kb on + strandat 3985.102 kb on - strandat 3985.132 kb on + strandat 3985.132 kb on + strandat 3985.149 kb on + strandat 3985.149 kb on + strandat 3985.149 kb on + strandat 3985.149 kb on + strandat 3985.150 kb on - strandat 3985.150 kb on - strandat 3985.151 kb on + strandat 3985.151 kb on + strandat 3985.152 kb on - strandat 3985.152 kb on - strandat 3985.152 kb on - strandat 3985.213 kb on + strand, within ABZR86_RS17640at 3985.213 kb on + strand, within ABZR86_RS17640at 3985.213 kb on + strand, within ABZR86_RS17640at 3985.213 kb on + strand, within ABZR86_RS17640at 3985.213 kb on + strand, within ABZR86_RS17640at 3985.214 kb on - strand, within ABZR86_RS17640at 3985.459 kb on + strand, within ABZR86_RS17640at 3985.459 kb on + strand, within ABZR86_RS17640at 3985.460 kb on - strand, within ABZR86_RS17640at 3985.478 kb on + strand, within ABZR86_RS17640at 3985.514 kb on - strand, within ABZR86_RS17640at 3985.568 kb on - strand, within ABZR86_RS17640at 3985.574 kb on - strand, within ABZR86_RS17640at 3985.694 kb on - strand, within ABZR86_RS17640at 3985.753 kb on + strand, within ABZR86_RS17640at 3985.753 kb on + strand, within ABZR86_RS17640at 3985.753 kb on + strand, within ABZR86_RS17640at 3985.754 kb on - strand, within ABZR86_RS17640at 3985.909 kb on + strand, within ABZR86_RS17640at 3985.910 kb on - strand, within ABZR86_RS17640at 3985.910 kb on - strand, within ABZR86_RS17640at 3985.910 kb on - strand, within ABZR86_RS17640at 3986.144 kb on + strandat 3986.215 kb on - strandat 3986.257 kb on + strandat 3986.257 kb on + strandat 3986.257 kb on + strandat 3986.257 kb on + strandat 3986.257 kb on + strandat 3986.259 kb on + strandat 3986.259 kb on + strandat 3986.259 kb on + strandat 3986.260 kb on - strandat 3986.282 kb on + strandat 3986.283 kb on - strandat 3986.306 kb on + strandat 3986.307 kb on - strandat 3986.358 kb on + strand, within ABZR86_RS17645at 3986.394 kb on + strand, within ABZR86_RS17645at 3986.394 kb on + strand, within ABZR86_RS17645at 3986.394 kb on + strand, within ABZR86_RS17645at 3986.394 kb on + strand, within ABZR86_RS17645at 3986.395 kb on - strand, within ABZR86_RS17645at 3986.404 kb on + strand, within ABZR86_RS17645at 3986.404 kb on + strand, within ABZR86_RS17645at 3986.405 kb on - strand, within ABZR86_RS17645at 3986.405 kb on - strand, within ABZR86_RS17645at 3986.405 kb on - strand, within ABZR86_RS17645at 3986.405 kb on - strand, within ABZR86_RS17645at 3986.540 kb on + strand, within ABZR86_RS17645at 3986.805 kb on + strandat 3986.805 kb on + strandat 3986.805 kb on + strandat 3986.805 kb on + strandat 3986.805 kb on + strandat 3986.806 kb on - strandat 3986.806 kb on - strandat 3986.806 kb on - strandat 3986.807 kb on + strandat 3986.807 kb on + strandat 3986.807 kb on + strandat 3986.808 kb on - strandat 3986.808 kb on - strandat 3986.877 kb on - strand, within ABZR86_RS17650at 3986.924 kb on + strand, within ABZR86_RS17650at 3986.924 kb on + strand, within ABZR86_RS17650at 3986.924 kb on + strand, within ABZR86_RS17650at 3986.925 kb on - strand, within ABZR86_RS17650at 3986.949 kb on - strand, within ABZR86_RS17650

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Fructose (C)
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3,984,140 + ABZR86_RS17635 0.13 +0.1
3,984,140 + ABZR86_RS17635 0.13 -1.0
3,984,141 - ABZR86_RS17635 0.13 +0.6
3,984,209 - ABZR86_RS17635 0.21 +0.6
3,984,267 + ABZR86_RS17635 0.27 -0.5
3,984,267 + ABZR86_RS17635 0.27 +1.0
3,984,267 + ABZR86_RS17635 0.27 +0.0
3,984,267 + ABZR86_RS17635 0.27 -0.3
3,984,268 - ABZR86_RS17635 0.27 -0.3
3,984,360 - ABZR86_RS17635 0.37 -3.0
3,984,374 + ABZR86_RS17635 0.38 +0.3
3,984,375 - ABZR86_RS17635 0.38 -0.5
3,984,376 + ABZR86_RS17635 0.38 +0.2
3,984,376 + ABZR86_RS17635 0.38 -1.3
3,984,376 + ABZR86_RS17635 0.38 -0.2
3,984,376 + ABZR86_RS17635 0.38 +0.5
3,984,377 - ABZR86_RS17635 0.39 +1.2
3,984,462 + ABZR86_RS17635 0.48 +0.1
3,984,516 + ABZR86_RS17635 0.54 -0.9
3,984,517 - ABZR86_RS17635 0.54 +0.1
3,984,559 - ABZR86_RS17635 0.58 -1.2
3,984,574 + ABZR86_RS17635 0.60 +1.4
3,984,574 + ABZR86_RS17635 0.60 +0.8
3,984,575 - ABZR86_RS17635 0.60 -0.1
3,984,575 - ABZR86_RS17635 0.60 +0.2
3,984,603 + ABZR86_RS17635 0.63 +1.0
3,984,603 + ABZR86_RS17635 0.63 +1.7
3,984,604 - ABZR86_RS17635 0.63 -0.1
3,984,605 + ABZR86_RS17635 0.63 +0.4
3,984,605 + ABZR86_RS17635 0.63 +0.7
3,984,605 + ABZR86_RS17635 0.63 -2.4
3,984,607 + ABZR86_RS17635 0.63 +0.9
3,984,607 + ABZR86_RS17635 0.63 -1.2
3,984,607 + ABZR86_RS17635 0.63 +0.0
3,984,607 + ABZR86_RS17635 0.63 +1.4
3,984,608 - ABZR86_RS17635 0.63 -0.7
3,984,608 - ABZR86_RS17635 0.63 -1.4
3,984,608 - ABZR86_RS17635 0.63 +0.8
3,984,608 - ABZR86_RS17635 0.63 -0.5
3,984,643 + ABZR86_RS17635 0.67 +0.1
3,984,644 - ABZR86_RS17635 0.67 +1.1
3,984,644 - ABZR86_RS17635 0.67 +0.2
3,984,644 - ABZR86_RS17635 0.67 +0.2
3,984,644 - ABZR86_RS17635 0.67 +0.5
3,984,714 + ABZR86_RS17635 0.75 -0.5
3,984,714 + ABZR86_RS17635 0.75 -0.3
3,984,715 - ABZR86_RS17635 0.75 -0.3
3,984,723 + ABZR86_RS17635 0.76 +0.0
3,984,723 + ABZR86_RS17635 0.76 +0.3
3,984,724 - ABZR86_RS17635 0.76 -0.8
3,984,766 - ABZR86_RS17635 0.80 -0.4
3,984,802 - ABZR86_RS17635 0.84 -0.3
3,984,802 - ABZR86_RS17635 0.84 +0.6
3,984,802 - ABZR86_RS17635 0.84 +0.4
3,984,802 - ABZR86_RS17635 0.84 +1.8
3,984,996 + +0.5
3,984,996 + -1.2
3,985,006 + +0.4
3,985,010 - -0.6
3,985,069 + -0.0
3,985,069 + -1.5
3,985,070 - -2.5
3,985,070 - +1.8
3,985,086 - -1.0
3,985,101 + +0.9
3,985,101 + -1.3
3,985,102 - -0.9
3,985,132 + -0.1
3,985,132 + -1.0
3,985,149 + -0.7
3,985,149 + -0.3
3,985,149 + -3.6
3,985,149 + -0.0
3,985,150 - +0.3
3,985,150 - +1.0
3,985,151 + +0.9
3,985,151 + +2.8
3,985,152 - +0.1
3,985,152 - +0.9
3,985,152 - +0.9
3,985,213 + ABZR86_RS17640 0.11 -0.8
3,985,213 + ABZR86_RS17640 0.11 -1.5
3,985,213 + ABZR86_RS17640 0.11 -2.1
3,985,213 + ABZR86_RS17640 0.11 +0.3
3,985,213 + ABZR86_RS17640 0.11 -1.4
3,985,214 - ABZR86_RS17640 0.11 +1.5
3,985,459 + ABZR86_RS17640 0.34 +1.6
3,985,459 + ABZR86_RS17640 0.34 -0.4
3,985,460 - ABZR86_RS17640 0.34 +0.4
3,985,478 + ABZR86_RS17640 0.35 +0.6
3,985,514 - ABZR86_RS17640 0.39 -0.5
3,985,568 - ABZR86_RS17640 0.44 -2.3
3,985,574 - ABZR86_RS17640 0.44 +1.2
3,985,694 - ABZR86_RS17640 0.55 -0.9
3,985,753 + ABZR86_RS17640 0.61 -0.5
3,985,753 + ABZR86_RS17640 0.61 -0.4
3,985,753 + ABZR86_RS17640 0.61 +1.0
3,985,754 - ABZR86_RS17640 0.61 +3.4
3,985,909 + ABZR86_RS17640 0.75 -0.2
3,985,910 - ABZR86_RS17640 0.75 +0.0
3,985,910 - ABZR86_RS17640 0.75 +0.2
3,985,910 - ABZR86_RS17640 0.75 +1.6
3,986,144 + +0.8
3,986,215 - +0.2
3,986,257 + -0.0
3,986,257 + -1.4
3,986,257 + +0.5
3,986,257 + -0.3
3,986,257 + -2.9
3,986,259 + -0.5
3,986,259 + +0.7
3,986,259 + +0.2
3,986,260 - -0.9
3,986,282 + -1.5
3,986,283 - -0.3
3,986,306 + -2.5
3,986,307 - +1.6
3,986,358 + ABZR86_RS17645 0.20 -1.0
3,986,394 + ABZR86_RS17645 0.27 -0.9
3,986,394 + ABZR86_RS17645 0.27 -0.8
3,986,394 + ABZR86_RS17645 0.27 +0.1
3,986,394 + ABZR86_RS17645 0.27 -0.2
3,986,395 - ABZR86_RS17645 0.27 +0.0
3,986,404 + ABZR86_RS17645 0.29 -0.5
3,986,404 + ABZR86_RS17645 0.29 +0.6
3,986,405 - ABZR86_RS17645 0.29 -1.0
3,986,405 - ABZR86_RS17645 0.29 +1.0
3,986,405 - ABZR86_RS17645 0.29 -0.1
3,986,405 - ABZR86_RS17645 0.29 -2.5
3,986,540 + ABZR86_RS17645 0.56 -0.3
3,986,805 + -0.5
3,986,805 + -0.3
3,986,805 + -0.1
3,986,805 + -0.8
3,986,805 + -1.3
3,986,806 - -0.2
3,986,806 - -2.7
3,986,806 - -1.1
3,986,807 + -2.5
3,986,807 + +0.2
3,986,807 + -0.1
3,986,808 - +0.1
3,986,808 - -0.3
3,986,877 - ABZR86_RS17650 0.44 +1.0
3,986,924 + ABZR86_RS17650 0.69 -0.3
3,986,924 + ABZR86_RS17650 0.69 -0.2
3,986,924 + ABZR86_RS17650 0.69 +0.2
3,986,925 - ABZR86_RS17650 0.69 -0.4
3,986,949 - ABZR86_RS17650 0.82 -0.5

Or see this region's nucleotide sequence