Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS17375 and ABZR86_RS17380 are separated by 87 nucleotides ABZR86_RS17380 and ABZR86_RS17385 are separated by 96 nucleotides ABZR86_RS17385 and ABZR86_RS17390 are separated by 29 nucleotides ABZR86_RS17390 and ABZR86_RS17395 are separated by 214 nucleotides
ABZR86_RS17375: ABZR86_RS17375 - ABC transporter ATP-binding protein, at 3,925,580 to 3,926,503
_RS17375
ABZR86_RS17380: ABZR86_RS17380 - LON peptidase substrate-binding domain-containing protein, at 3,926,591 to 3,927,193
_RS17380
ABZR86_RS17385: ABZR86_RS17385 - NAD(P)-dependent oxidoreductase, at 3,927,290 to 3,928,108
_RS17385
ABZR86_RS17390: ABZR86_RS17390 - VOC family protein, at 3,928,138 to 3,928,560
_RS17390
ABZR86_RS17395: ABZR86_RS17395 - sigma-54 dependent transcriptional regulator, at 3,928,775 to 3,930,112
_RS17395
Position (kb)
3927
3928
3929 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 3926.503 kb on + strand at 3926.503 kb on + strand at 3926.503 kb on + strand at 3926.503 kb on + strand at 3926.503 kb on + strand at 3926.503 kb on + strand at 3926.504 kb on - strand at 3926.504 kb on - strand at 3926.504 kb on - strand at 3926.510 kb on + strand at 3926.510 kb on + strand at 3926.510 kb on + strand at 3926.510 kb on + strand at 3926.510 kb on + strand at 3926.510 kb on + strand at 3926.511 kb on - strand at 3926.511 kb on - strand at 3926.511 kb on - strand at 3926.511 kb on - strand at 3926.522 kb on + strand at 3926.523 kb on - strand at 3926.523 kb on - strand at 3926.577 kb on + strand at 3926.578 kb on - strand at 3926.649 kb on - strand at 3927.047 kb on + strand, within ABZR86_RS17380 at 3927.248 kb on + strand at 3927.248 kb on + strand at 3927.248 kb on + strand at 3927.249 kb on - strand at 3927.249 kb on - strand at 3927.249 kb on - strand at 3927.724 kb on + strand, within ABZR86_RS17385 at 3927.724 kb on + strand, within ABZR86_RS17385 at 3927.724 kb on + strand, within ABZR86_RS17385 at 3927.724 kb on + strand, within ABZR86_RS17385 at 3927.724 kb on + strand, within ABZR86_RS17385 at 3927.725 kb on - strand, within ABZR86_RS17385 at 3927.725 kb on - strand, within ABZR86_RS17385 at 3927.780 kb on - strand, within ABZR86_RS17385 at 3927.780 kb on - strand, within ABZR86_RS17385 at 3927.780 kb on - strand, within ABZR86_RS17385 at 3927.780 kb on - strand, within ABZR86_RS17385 at 3928.058 kb on + strand at 3928.058 kb on + strand at 3928.059 kb on - strand at 3928.059 kb on - strand at 3928.095 kb on + strand at 3928.095 kb on + strand at 3928.095 kb on + strand at 3928.096 kb on - strand at 3928.132 kb on + strand at 3928.132 kb on + strand at 3928.133 kb on - strand at 3928.133 kb on - strand at 3928.133 kb on - strand at 3928.144 kb on + strand at 3928.144 kb on + strand at 3928.145 kb on - strand at 3928.145 kb on - strand at 3928.145 kb on - strand at 3928.264 kb on + strand, within ABZR86_RS17390 at 3928.264 kb on + strand, within ABZR86_RS17390 at 3928.265 kb on - strand, within ABZR86_RS17390 at 3928.265 kb on - strand, within ABZR86_RS17390 at 3928.265 kb on - strand, within ABZR86_RS17390 at 3928.265 kb on - strand, within ABZR86_RS17390 at 3928.309 kb on + strand, within ABZR86_RS17390 at 3928.310 kb on - strand, within ABZR86_RS17390 at 3928.310 kb on - strand, within ABZR86_RS17390 at 3928.310 kb on - strand, within ABZR86_RS17390 at 3928.310 kb on - strand, within ABZR86_RS17390 at 3928.310 kb on - strand, within ABZR86_RS17390 at 3928.333 kb on + strand, within ABZR86_RS17390 at 3928.333 kb on + strand, within ABZR86_RS17390 at 3928.333 kb on + strand, within ABZR86_RS17390 at 3928.334 kb on - strand, within ABZR86_RS17390 at 3928.334 kb on - strand, within ABZR86_RS17390 at 3928.334 kb on - strand, within ABZR86_RS17390 at 3928.384 kb on + strand, within ABZR86_RS17390 at 3928.384 kb on + strand, within ABZR86_RS17390 at 3928.385 kb on - strand, within ABZR86_RS17390 at 3928.385 kb on - strand, within ABZR86_RS17390 at 3928.385 kb on - strand, within ABZR86_RS17390 at 3928.385 kb on - strand, within ABZR86_RS17390 at 3928.385 kb on - strand, within ABZR86_RS17390 at 3928.385 kb on - strand, within ABZR86_RS17390 at 3928.385 kb on - strand, within ABZR86_RS17390 at 3928.417 kb on + strand, within ABZR86_RS17390 at 3928.418 kb on - strand, within ABZR86_RS17390 at 3928.418 kb on - strand, within ABZR86_RS17390 at 3928.418 kb on - strand, within ABZR86_RS17390 at 3928.418 kb on - strand, within ABZR86_RS17390 at 3928.418 kb on - strand, within ABZR86_RS17390 at 3928.418 kb on - strand, within ABZR86_RS17390 at 3928.546 kb on - strand at 3928.546 kb on - strand at 3928.558 kb on + strand at 3928.559 kb on - strand at 3928.653 kb on + strand at 3928.653 kb on + strand at 3928.653 kb on + strand at 3928.654 kb on - strand at 3928.654 kb on - strand at 3928.654 kb on - strand at 3928.654 kb on - strand at 3928.655 kb on + strand at 3928.669 kb on + strand at 3928.669 kb on + strand at 3928.669 kb on + strand at 3928.670 kb on - strand at 3928.670 kb on - strand at 3928.670 kb on - strand at 3928.683 kb on - strand at 3928.768 kb on + strand at 3928.769 kb on - strand at 3928.769 kb on - strand at 3928.868 kb on + strand at 3928.869 kb on - strand at 3928.869 kb on - strand at 3928.869 kb on - strand at 3928.924 kb on + strand, within ABZR86_RS17395 at 3928.925 kb on - strand, within ABZR86_RS17395 at 3928.925 kb on - strand, within ABZR86_RS17395 at 3928.925 kb on - strand, within ABZR86_RS17395 at 3928.925 kb on - strand, within ABZR86_RS17395 at 3929.077 kb on + strand, within ABZR86_RS17395 at 3929.077 kb on + strand, within ABZR86_RS17395 at 3929.077 kb on + strand, within ABZR86_RS17395 at 3929.077 kb on + strand, within ABZR86_RS17395 at 3929.077 kb on + strand, within ABZR86_RS17395 at 3929.078 kb on - strand, within ABZR86_RS17395 at 3929.078 kb on - strand, within ABZR86_RS17395 at 3929.078 kb on - strand, within ABZR86_RS17395
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 3,926,503 + -1.5 3,926,503 + -2.6 3,926,503 + -0.9 3,926,503 + -0.1 3,926,503 + -0.0 3,926,503 + -0.3 3,926,504 - +0.2 3,926,504 - -0.0 3,926,504 - -0.5 3,926,510 + -0.0 3,926,510 + -0.2 3,926,510 + -0.6 3,926,510 + +0.0 3,926,510 + +0.6 3,926,510 + +0.0 3,926,511 - -0.6 3,926,511 - -0.2 3,926,511 - -1.4 3,926,511 - +0.7 3,926,522 + +0.2 3,926,523 - -1.0 3,926,523 - +0.0 3,926,577 + -1.4 3,926,578 - -0.6 3,926,649 - -0.5 3,927,047 + ABZR86_RS17380 0.76 -0.9 3,927,248 + -0.1 3,927,248 + +0.0 3,927,248 + -1.1 3,927,249 - +0.3 3,927,249 - -0.7 3,927,249 - -0.3 3,927,724 + ABZR86_RS17385 0.53 -2.0 3,927,724 + ABZR86_RS17385 0.53 -0.0 3,927,724 + ABZR86_RS17385 0.53 +0.0 3,927,724 + ABZR86_RS17385 0.53 -1.4 3,927,724 + ABZR86_RS17385 0.53 +0.5 3,927,725 - ABZR86_RS17385 0.53 -1.0 3,927,725 - ABZR86_RS17385 0.53 -0.3 3,927,780 - ABZR86_RS17385 0.60 -1.4 3,927,780 - ABZR86_RS17385 0.60 +0.7 3,927,780 - ABZR86_RS17385 0.60 +0.6 3,927,780 - ABZR86_RS17385 0.60 -1.4 3,928,058 + +0.2 3,928,058 + +0.6 3,928,059 - -1.9 3,928,059 - +0.5 3,928,095 + -0.3 3,928,095 + +0.8 3,928,095 + +0.0 3,928,096 - -3.1 3,928,132 + -0.3 3,928,132 + +0.1 3,928,133 - +0.0 3,928,133 - -0.2 3,928,133 - -0.8 3,928,144 + +0.6 3,928,144 + -2.1 3,928,145 - +0.3 3,928,145 - -1.8 3,928,145 - -0.8 3,928,264 + ABZR86_RS17390 0.30 +0.2 3,928,264 + ABZR86_RS17390 0.30 +1.5 3,928,265 - ABZR86_RS17390 0.30 -1.5 3,928,265 - ABZR86_RS17390 0.30 -0.9 3,928,265 - ABZR86_RS17390 0.30 +0.9 3,928,265 - ABZR86_RS17390 0.30 -0.2 3,928,309 + ABZR86_RS17390 0.40 -1.5 3,928,310 - ABZR86_RS17390 0.41 -0.3 3,928,310 - ABZR86_RS17390 0.41 +0.6 3,928,310 - ABZR86_RS17390 0.41 -0.7 3,928,310 - ABZR86_RS17390 0.41 -0.1 3,928,310 - ABZR86_RS17390 0.41 -0.5 3,928,333 + ABZR86_RS17390 0.46 -1.4 3,928,333 + ABZR86_RS17390 0.46 -0.8 3,928,333 + ABZR86_RS17390 0.46 -0.3 3,928,334 - ABZR86_RS17390 0.46 +0.5 3,928,334 - ABZR86_RS17390 0.46 +1.0 3,928,334 - ABZR86_RS17390 0.46 -0.6 3,928,384 + ABZR86_RS17390 0.58 +0.1 3,928,384 + ABZR86_RS17390 0.58 -2.3 3,928,385 - ABZR86_RS17390 0.58 -3.0 3,928,385 - ABZR86_RS17390 0.58 +0.1 3,928,385 - ABZR86_RS17390 0.58 -0.5 3,928,385 - ABZR86_RS17390 0.58 -0.5 3,928,385 - ABZR86_RS17390 0.58 +1.8 3,928,385 - ABZR86_RS17390 0.58 +2.3 3,928,385 - ABZR86_RS17390 0.58 -0.2 3,928,417 + ABZR86_RS17390 0.66 -1.0 3,928,418 - ABZR86_RS17390 0.66 +0.3 3,928,418 - ABZR86_RS17390 0.66 -0.9 3,928,418 - ABZR86_RS17390 0.66 +1.0 3,928,418 - ABZR86_RS17390 0.66 -1.8 3,928,418 - ABZR86_RS17390 0.66 +0.8 3,928,418 - ABZR86_RS17390 0.66 -2.3 3,928,546 - -0.5 3,928,546 - -1.2 3,928,558 + +0.1 3,928,559 - -0.6 3,928,653 + -0.7 3,928,653 + +1.2 3,928,653 + +0.3 3,928,654 - +0.8 3,928,654 - +4.4 3,928,654 - +0.9 3,928,654 - -0.8 3,928,655 + -0.8 3,928,669 + -0.3 3,928,669 + +0.6 3,928,669 + +0.8 3,928,670 - +0.8 3,928,670 - -0.6 3,928,670 - -0.6 3,928,683 - -1.8 3,928,768 + +1.1 3,928,769 - +0.5 3,928,769 - -2.6 3,928,868 + -0.3 3,928,869 - +0.5 3,928,869 - +0.4 3,928,869 - +0.4 3,928,924 + ABZR86_RS17395 0.11 -1.4 3,928,925 - ABZR86_RS17395 0.11 +0.3 3,928,925 - ABZR86_RS17395 0.11 +1.5 3,928,925 - ABZR86_RS17395 0.11 +1.1 3,928,925 - ABZR86_RS17395 0.11 -1.5 3,929,077 + ABZR86_RS17395 0.23 +0.1 3,929,077 + ABZR86_RS17395 0.23 +0.1 3,929,077 + ABZR86_RS17395 0.23 -0.3 3,929,077 + ABZR86_RS17395 0.23 +0.2 3,929,077 + ABZR86_RS17395 0.23 +0.2 3,929,078 - ABZR86_RS17395 0.23 +0.7 3,929,078 - ABZR86_RS17395 0.23 +1.3 3,929,078 - ABZR86_RS17395 0.23 -0.2
Or see this region's nucleotide sequence