Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS16810 and ABZR86_RS16815 are separated by 4 nucleotides ABZR86_RS16815 and ABZR86_RS16820 are separated by 142 nucleotides ABZR86_RS16820 and ABZR86_RS16825 are separated by 98 nucleotides ABZR86_RS16825 and ABZR86_RS16830 are separated by 4 nucleotides
ABZR86_RS16810: ABZR86_RS16810 - methylglyoxal synthase, at 3,797,749 to 3,798,630
_RS16810
ABZR86_RS16815: ABZR86_RS16815 - NRDE family protein, at 3,798,635 to 3,799,402
_RS16815
ABZR86_RS16820: ABZR86_RS16820 - YchJ family metal-binding protein, at 3,799,545 to 3,799,946
_RS16820
ABZR86_RS16825: ABZR86_RS16825 - DUF938 domain-containing protein, at 3,800,045 to 3,800,635
_RS16825
ABZR86_RS16830: ABZR86_RS16830 - hypothetical protein, at 3,800,640 to 3,800,837
_RS16830
Position (kb)
3799
3800 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3798.893 kb on + strand, within ABZR86_RS16815 at 3798.893 kb on + strand, within ABZR86_RS16815 at 3798.894 kb on - strand, within ABZR86_RS16815 at 3798.916 kb on + strand, within ABZR86_RS16815 at 3798.917 kb on - strand, within ABZR86_RS16815 at 3798.957 kb on - strand, within ABZR86_RS16815 at 3799.001 kb on + strand, within ABZR86_RS16815 at 3799.001 kb on + strand, within ABZR86_RS16815 at 3799.001 kb on + strand, within ABZR86_RS16815 at 3799.002 kb on - strand, within ABZR86_RS16815 at 3799.002 kb on - strand, within ABZR86_RS16815 at 3799.052 kb on + strand, within ABZR86_RS16815 at 3799.052 kb on + strand, within ABZR86_RS16815 at 3799.078 kb on + strand, within ABZR86_RS16815 at 3799.079 kb on - strand, within ABZR86_RS16815 at 3799.079 kb on - strand, within ABZR86_RS16815 at 3799.278 kb on - strand, within ABZR86_RS16815 at 3799.278 kb on - strand, within ABZR86_RS16815 at 3799.400 kb on + strand at 3799.400 kb on + strand at 3799.406 kb on + strand at 3799.573 kb on + strand at 3799.573 kb on + strand at 3799.573 kb on + strand at 3799.574 kb on - strand at 3799.576 kb on + strand at 3799.576 kb on + strand at 3799.792 kb on + strand, within ABZR86_RS16820 at 3799.793 kb on - strand, within ABZR86_RS16820 at 3799.793 kb on - strand, within ABZR86_RS16820 at 3799.813 kb on + strand, within ABZR86_RS16820 at 3799.814 kb on - strand, within ABZR86_RS16820 at 3799.814 kb on - strand, within ABZR86_RS16820 at 3799.814 kb on - strand, within ABZR86_RS16820 at 3799.823 kb on - strand, within ABZR86_RS16820 at 3799.894 kb on + strand, within ABZR86_RS16820 at 3799.895 kb on - strand, within ABZR86_RS16820 at 3800.217 kb on + strand, within ABZR86_RS16825 at 3800.229 kb on + strand, within ABZR86_RS16825 at 3800.244 kb on + strand, within ABZR86_RS16825 at 3800.244 kb on + strand, within ABZR86_RS16825 at 3800.244 kb on + strand, within ABZR86_RS16825 at 3800.244 kb on + strand, within ABZR86_RS16825 at 3800.245 kb on - strand, within ABZR86_RS16825 at 3800.245 kb on - strand, within ABZR86_RS16825 at 3800.408 kb on - strand, within ABZR86_RS16825 at 3800.915 kb on + strand at 3800.916 kb on - strand at 3800.916 kb on - strand at 3800.925 kb on + strand at 3800.926 kb on - strand at 3800.937 kb on + strand at 3800.937 kb on + strand at 3800.938 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 3,798,893 + ABZR86_RS16815 0.34 -1.5 3,798,893 + ABZR86_RS16815 0.34 +1.2 3,798,894 - ABZR86_RS16815 0.34 -0.0 3,798,916 + ABZR86_RS16815 0.37 -1.3 3,798,917 - ABZR86_RS16815 0.37 +0.3 3,798,957 - ABZR86_RS16815 0.42 -1.3 3,799,001 + ABZR86_RS16815 0.48 -0.1 3,799,001 + ABZR86_RS16815 0.48 -0.3 3,799,001 + ABZR86_RS16815 0.48 +0.9 3,799,002 - ABZR86_RS16815 0.48 +0.6 3,799,002 - ABZR86_RS16815 0.48 -1.9 3,799,052 + ABZR86_RS16815 0.54 +1.2 3,799,052 + ABZR86_RS16815 0.54 +0.3 3,799,078 + ABZR86_RS16815 0.58 -0.6 3,799,079 - ABZR86_RS16815 0.58 +0.6 3,799,079 - ABZR86_RS16815 0.58 +0.7 3,799,278 - ABZR86_RS16815 0.84 -0.4 3,799,278 - ABZR86_RS16815 0.84 -1.4 3,799,400 + +0.2 3,799,400 + +1.2 3,799,406 + -0.0 3,799,573 + +0.3 3,799,573 + -0.3 3,799,573 + +1.0 3,799,574 - +0.0 3,799,576 + -0.4 3,799,576 + -0.0 3,799,792 + ABZR86_RS16820 0.61 -0.1 3,799,793 - ABZR86_RS16820 0.62 -0.4 3,799,793 - ABZR86_RS16820 0.62 +0.9 3,799,813 + ABZR86_RS16820 0.67 -0.5 3,799,814 - ABZR86_RS16820 0.67 -0.0 3,799,814 - ABZR86_RS16820 0.67 -0.1 3,799,814 - ABZR86_RS16820 0.67 +0.0 3,799,823 - ABZR86_RS16820 0.69 +0.0 3,799,894 + ABZR86_RS16820 0.87 -3.3 3,799,895 - ABZR86_RS16820 0.87 +0.3 3,800,217 + ABZR86_RS16825 0.29 -2.4 3,800,229 + ABZR86_RS16825 0.31 -0.3 3,800,244 + ABZR86_RS16825 0.34 -0.5 3,800,244 + ABZR86_RS16825 0.34 -0.5 3,800,244 + ABZR86_RS16825 0.34 +0.9 3,800,244 + ABZR86_RS16825 0.34 +0.2 3,800,245 - ABZR86_RS16825 0.34 +0.5 3,800,245 - ABZR86_RS16825 0.34 +0.3 3,800,408 - ABZR86_RS16825 0.61 -0.0 3,800,915 + -0.4 3,800,916 - +0.4 3,800,916 - -0.7 3,800,925 + -0.5 3,800,926 - +0.4 3,800,937 + -0.6 3,800,937 + -1.5 3,800,938 - -0.7
Or see this region's nucleotide sequence