Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS15220 and ABZR86_RS15225 are separated by 62 nucleotides ABZR86_RS15225 and ABZR86_RS15230 are separated by 46 nucleotides
ABZR86_RS15220: ABZR86_RS15220 - hypothetical protein, at 3,427,990 to 3,430,209
_RS15220
ABZR86_RS15225: ABZR86_RS15225 - PA0069 family radical SAM protein, at 3,430,272 to 3,431,351
_RS15225
ABZR86_RS15230: ABZR86_RS15230 - PA0069 family radical SAM protein, at 3,431,398 to 3,432,507
_RS15230
Position (kb)
3430
3431
3432 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3429.400 kb on + strand, within ABZR86_RS15220 at 3429.432 kb on + strand, within ABZR86_RS15220 at 3429.613 kb on + strand, within ABZR86_RS15220 at 3429.613 kb on + strand, within ABZR86_RS15220 at 3429.613 kb on + strand, within ABZR86_RS15220 at 3429.613 kb on + strand, within ABZR86_RS15220 at 3429.613 kb on + strand, within ABZR86_RS15220 at 3429.613 kb on + strand, within ABZR86_RS15220 at 3429.613 kb on + strand, within ABZR86_RS15220 at 3429.613 kb on + strand, within ABZR86_RS15220 at 3429.614 kb on - strand, within ABZR86_RS15220 at 3429.614 kb on - strand, within ABZR86_RS15220 at 3429.614 kb on - strand, within ABZR86_RS15220 at 3429.614 kb on - strand, within ABZR86_RS15220 at 3429.614 kb on - strand, within ABZR86_RS15220 at 3429.614 kb on - strand, within ABZR86_RS15220 at 3429.614 kb on - strand, within ABZR86_RS15220 at 3429.614 kb on - strand, within ABZR86_RS15220 at 3429.614 kb on - strand, within ABZR86_RS15220 at 3429.614 kb on - strand, within ABZR86_RS15220 at 3429.614 kb on - strand, within ABZR86_RS15220 at 3429.614 kb on - strand, within ABZR86_RS15220 at 3429.614 kb on - strand, within ABZR86_RS15220 at 3429.703 kb on + strand, within ABZR86_RS15220 at 3429.704 kb on - strand, within ABZR86_RS15220 at 3429.804 kb on + strand, within ABZR86_RS15220 at 3429.804 kb on + strand, within ABZR86_RS15220 at 3429.805 kb on - strand, within ABZR86_RS15220 at 3429.805 kb on - strand, within ABZR86_RS15220 at 3429.805 kb on - strand, within ABZR86_RS15220 at 3429.805 kb on - strand, within ABZR86_RS15220 at 3429.805 kb on - strand, within ABZR86_RS15220 at 3429.871 kb on + strand, within ABZR86_RS15220 at 3429.872 kb on - strand, within ABZR86_RS15220 at 3429.872 kb on - strand, within ABZR86_RS15220 at 3429.986 kb on - strand, within ABZR86_RS15220 at 3430.017 kb on + strand at 3430.017 kb on + strand at 3430.018 kb on - strand at 3430.153 kb on + strand at 3430.154 kb on - strand at 3430.154 kb on - strand at 3430.356 kb on + strand at 3430.356 kb on + strand at 3430.356 kb on + strand at 3430.356 kb on + strand at 3430.380 kb on + strand, within ABZR86_RS15225 at 3430.380 kb on + strand, within ABZR86_RS15225 at 3430.381 kb on - strand, within ABZR86_RS15225 at 3430.381 kb on - strand, within ABZR86_RS15225 at 3430.381 kb on - strand, within ABZR86_RS15225 at 3430.381 kb on - strand, within ABZR86_RS15225 at 3430.497 kb on + strand, within ABZR86_RS15225 at 3430.498 kb on - strand, within ABZR86_RS15225 at 3430.498 kb on - strand, within ABZR86_RS15225 at 3430.524 kb on + strand, within ABZR86_RS15225 at 3430.524 kb on + strand, within ABZR86_RS15225 at 3430.551 kb on + strand, within ABZR86_RS15225 at 3430.551 kb on + strand, within ABZR86_RS15225 at 3430.648 kb on - strand, within ABZR86_RS15225 at 3430.680 kb on - strand, within ABZR86_RS15225 at 3430.689 kb on + strand, within ABZR86_RS15225 at 3430.690 kb on - strand, within ABZR86_RS15225 at 3430.690 kb on - strand, within ABZR86_RS15225 at 3430.690 kb on - strand, within ABZR86_RS15225 at 3430.690 kb on - strand, within ABZR86_RS15225 at 3430.711 kb on - strand, within ABZR86_RS15225 at 3430.711 kb on - strand, within ABZR86_RS15225 at 3430.845 kb on + strand, within ABZR86_RS15225 at 3430.845 kb on + strand, within ABZR86_RS15225 at 3430.845 kb on + strand, within ABZR86_RS15225 at 3430.845 kb on + strand, within ABZR86_RS15225 at 3430.845 kb on + strand, within ABZR86_RS15225 at 3430.845 kb on + strand, within ABZR86_RS15225 at 3430.846 kb on - strand, within ABZR86_RS15225 at 3430.846 kb on - strand, within ABZR86_RS15225 at 3430.846 kb on - strand, within ABZR86_RS15225 at 3430.846 kb on - strand, within ABZR86_RS15225 at 3430.846 kb on - strand, within ABZR86_RS15225 at 3430.846 kb on - strand, within ABZR86_RS15225 at 3430.846 kb on - strand, within ABZR86_RS15225 at 3431.058 kb on + strand, within ABZR86_RS15225 at 3431.058 kb on + strand, within ABZR86_RS15225 at 3431.058 kb on + strand, within ABZR86_RS15225 at 3431.058 kb on + strand, within ABZR86_RS15225 at 3431.058 kb on + strand, within ABZR86_RS15225 at 3431.059 kb on - strand, within ABZR86_RS15225 at 3431.121 kb on + strand, within ABZR86_RS15225 at 3431.181 kb on + strand, within ABZR86_RS15225 at 3431.181 kb on + strand, within ABZR86_RS15225 at 3431.259 kb on + strand at 3431.260 kb on - strand at 3431.260 kb on - strand at 3431.260 kb on - strand at 3431.260 kb on - strand at 3431.349 kb on + strand at 3431.674 kb on + strand, within ABZR86_RS15230 at 3431.674 kb on + strand, within ABZR86_RS15230 at 3431.674 kb on + strand, within ABZR86_RS15230 at 3431.674 kb on + strand, within ABZR86_RS15230 at 3431.675 kb on - strand, within ABZR86_RS15230 at 3431.675 kb on - strand, within ABZR86_RS15230 at 3431.675 kb on - strand, within ABZR86_RS15230 at 3431.701 kb on + strand, within ABZR86_RS15230 at 3431.701 kb on + strand, within ABZR86_RS15230 at 3431.702 kb on - strand, within ABZR86_RS15230 at 3431.702 kb on - strand, within ABZR86_RS15230 at 3431.798 kb on - strand, within ABZR86_RS15230 at 3431.798 kb on - strand, within ABZR86_RS15230 at 3431.839 kb on + strand, within ABZR86_RS15230 at 3431.839 kb on + strand, within ABZR86_RS15230 at 3431.839 kb on + strand, within ABZR86_RS15230 at 3431.839 kb on + strand, within ABZR86_RS15230 at 3432.208 kb on + strand, within ABZR86_RS15230 at 3432.209 kb on - strand, within ABZR86_RS15230 at 3432.331 kb on + strand, within ABZR86_RS15230 at 3432.331 kb on + strand, within ABZR86_RS15230 at 3432.332 kb on - strand, within ABZR86_RS15230
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 3,429,400 + ABZR86_RS15220 0.64 -0.3 3,429,432 + ABZR86_RS15220 0.65 -1.7 3,429,613 + ABZR86_RS15220 0.73 +0.1 3,429,613 + ABZR86_RS15220 0.73 -0.7 3,429,613 + ABZR86_RS15220 0.73 +0.8 3,429,613 + ABZR86_RS15220 0.73 -2.6 3,429,613 + ABZR86_RS15220 0.73 +0.4 3,429,613 + ABZR86_RS15220 0.73 +0.4 3,429,613 + ABZR86_RS15220 0.73 -2.4 3,429,613 + ABZR86_RS15220 0.73 -0.6 3,429,614 - ABZR86_RS15220 0.73 +0.6 3,429,614 - ABZR86_RS15220 0.73 -1.1 3,429,614 - ABZR86_RS15220 0.73 -0.6 3,429,614 - ABZR86_RS15220 0.73 +0.4 3,429,614 - ABZR86_RS15220 0.73 -0.6 3,429,614 - ABZR86_RS15220 0.73 +1.6 3,429,614 - ABZR86_RS15220 0.73 -1.3 3,429,614 - ABZR86_RS15220 0.73 +0.5 3,429,614 - ABZR86_RS15220 0.73 -1.2 3,429,614 - ABZR86_RS15220 0.73 +0.7 3,429,614 - ABZR86_RS15220 0.73 -0.2 3,429,614 - ABZR86_RS15220 0.73 -1.0 3,429,614 - ABZR86_RS15220 0.73 +1.3 3,429,703 + ABZR86_RS15220 0.77 +0.2 3,429,704 - ABZR86_RS15220 0.77 -1.0 3,429,804 + ABZR86_RS15220 0.82 +0.9 3,429,804 + ABZR86_RS15220 0.82 +0.5 3,429,805 - ABZR86_RS15220 0.82 +1.1 3,429,805 - ABZR86_RS15220 0.82 +0.5 3,429,805 - ABZR86_RS15220 0.82 +0.0 3,429,805 - ABZR86_RS15220 0.82 -0.2 3,429,805 - ABZR86_RS15220 0.82 +0.1 3,429,871 + ABZR86_RS15220 0.85 +0.0 3,429,872 - ABZR86_RS15220 0.85 -0.1 3,429,872 - ABZR86_RS15220 0.85 +2.2 3,429,986 - ABZR86_RS15220 0.90 -0.1 3,430,017 + -1.8 3,430,017 + -0.3 3,430,018 - -0.5 3,430,153 + -0.6 3,430,154 - +1.5 3,430,154 - +0.8 3,430,356 + -0.1 3,430,356 + -0.5 3,430,356 + +0.6 3,430,356 + -1.3 3,430,380 + ABZR86_RS15225 0.10 -0.8 3,430,380 + ABZR86_RS15225 0.10 -0.9 3,430,381 - ABZR86_RS15225 0.10 -0.2 3,430,381 - ABZR86_RS15225 0.10 -0.9 3,430,381 - ABZR86_RS15225 0.10 -2.9 3,430,381 - ABZR86_RS15225 0.10 +1.7 3,430,497 + ABZR86_RS15225 0.21 -0.5 3,430,498 - ABZR86_RS15225 0.21 +0.7 3,430,498 - ABZR86_RS15225 0.21 +1.9 3,430,524 + ABZR86_RS15225 0.23 +0.1 3,430,524 + ABZR86_RS15225 0.23 -1.2 3,430,551 + ABZR86_RS15225 0.26 +0.0 3,430,551 + ABZR86_RS15225 0.26 +0.6 3,430,648 - ABZR86_RS15225 0.35 +1.4 3,430,680 - ABZR86_RS15225 0.38 +0.8 3,430,689 + ABZR86_RS15225 0.39 -0.6 3,430,690 - ABZR86_RS15225 0.39 +1.2 3,430,690 - ABZR86_RS15225 0.39 +0.7 3,430,690 - ABZR86_RS15225 0.39 -0.1 3,430,690 - ABZR86_RS15225 0.39 +1.3 3,430,711 - ABZR86_RS15225 0.41 +0.7 3,430,711 - ABZR86_RS15225 0.41 -2.9 3,430,845 + ABZR86_RS15225 0.53 -2.6 3,430,845 + ABZR86_RS15225 0.53 +0.1 3,430,845 + ABZR86_RS15225 0.53 +1.2 3,430,845 + ABZR86_RS15225 0.53 -1.6 3,430,845 + ABZR86_RS15225 0.53 +0.4 3,430,845 + ABZR86_RS15225 0.53 -2.1 3,430,846 - ABZR86_RS15225 0.53 +3.4 3,430,846 - ABZR86_RS15225 0.53 -1.1 3,430,846 - ABZR86_RS15225 0.53 -1.4 3,430,846 - ABZR86_RS15225 0.53 +0.1 3,430,846 - ABZR86_RS15225 0.53 -0.2 3,430,846 - ABZR86_RS15225 0.53 -0.7 3,430,846 - ABZR86_RS15225 0.53 +0.8 3,431,058 + ABZR86_RS15225 0.73 -0.3 3,431,058 + ABZR86_RS15225 0.73 +0.8 3,431,058 + ABZR86_RS15225 0.73 +0.2 3,431,058 + ABZR86_RS15225 0.73 +0.5 3,431,058 + ABZR86_RS15225 0.73 -0.2 3,431,059 - ABZR86_RS15225 0.73 -0.9 3,431,121 + ABZR86_RS15225 0.79 -1.2 3,431,181 + ABZR86_RS15225 0.84 -1.0 3,431,181 + ABZR86_RS15225 0.84 -0.2 3,431,259 + +0.1 3,431,260 - -0.1 3,431,260 - +0.7 3,431,260 - -1.7 3,431,260 - +0.3 3,431,349 + +0.5 3,431,674 + ABZR86_RS15230 0.25 +0.1 3,431,674 + ABZR86_RS15230 0.25 +0.5 3,431,674 + ABZR86_RS15230 0.25 +0.5 3,431,674 + ABZR86_RS15230 0.25 +0.1 3,431,675 - ABZR86_RS15230 0.25 -1.4 3,431,675 - ABZR86_RS15230 0.25 +1.6 3,431,675 - ABZR86_RS15230 0.25 +0.0 3,431,701 + ABZR86_RS15230 0.27 -1.1 3,431,701 + ABZR86_RS15230 0.27 +0.8 3,431,702 - ABZR86_RS15230 0.27 +0.4 3,431,702 - ABZR86_RS15230 0.27 +1.1 3,431,798 - ABZR86_RS15230 0.36 +1.2 3,431,798 - ABZR86_RS15230 0.36 -0.6 3,431,839 + ABZR86_RS15230 0.40 +0.6 3,431,839 + ABZR86_RS15230 0.40 +0.8 3,431,839 + ABZR86_RS15230 0.40 +0.7 3,431,839 + ABZR86_RS15230 0.40 -0.6 3,432,208 + ABZR86_RS15230 0.73 -0.0 3,432,209 - ABZR86_RS15230 0.73 +0.2 3,432,331 + ABZR86_RS15230 0.84 -0.4 3,432,331 + ABZR86_RS15230 0.84 -0.4 3,432,332 - ABZR86_RS15230 0.84 -0.8
Or see this region's nucleotide sequence