Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS12725 and ABZR86_RS12730 are separated by 130 nucleotides ABZR86_RS12730 and ABZR86_RS12735 overlap by 4 nucleotides ABZR86_RS12735 and ABZR86_RS12740 overlap by 90 nucleotides
ABZR86_RS12725: ABZR86_RS12725 - thiol:disulfide interchange protein DsbA/DsbL, at 2,852,280 to 2,852,936
_RS12725
ABZR86_RS12730: ABZR86_RS12730 - endonuclease/exonuclease/phosphatase family protein, at 2,853,067 to 2,853,873
_RS12730
ABZR86_RS12735: ABZR86_RS12735 - hypothetical protein, at 2,853,870 to 2,854,286
_RS12735
ABZR86_RS12740: ABZR86_RS12740 - glycoside hydrolase family 17, at 2,854,197 to 2,855,804
_RS12740
Position (kb)
2853
2854
2855 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2852.970 kb on + strand at 2852.971 kb on - strand at 2852.971 kb on - strand at 2853.157 kb on + strand, within ABZR86_RS12730 at 2853.167 kb on - strand, within ABZR86_RS12730 at 2853.319 kb on + strand, within ABZR86_RS12730 at 2853.390 kb on + strand, within ABZR86_RS12730 at 2853.391 kb on - strand, within ABZR86_RS12730 at 2853.440 kb on - strand, within ABZR86_RS12730 at 2853.440 kb on - strand, within ABZR86_RS12730 at 2854.047 kb on + strand, within ABZR86_RS12735 at 2854.047 kb on + strand, within ABZR86_RS12735 at 2854.048 kb on - strand, within ABZR86_RS12735 at 2854.048 kb on - strand, within ABZR86_RS12735 at 2854.048 kb on - strand, within ABZR86_RS12735 at 2854.155 kb on + strand, within ABZR86_RS12735 at 2854.156 kb on - strand, within ABZR86_RS12735 at 2854.156 kb on - strand, within ABZR86_RS12735 at 2854.156 kb on - strand, within ABZR86_RS12735 at 2854.156 kb on - strand, within ABZR86_RS12735 at 2854.199 kb on - strand at 2854.199 kb on - strand at 2854.285 kb on - strand at 2854.356 kb on + strand at 2854.357 kb on - strand at 2854.357 kb on - strand at 2854.357 kb on - strand at 2854.357 kb on - strand at 2854.357 kb on - strand at 2854.423 kb on + strand, within ABZR86_RS12740 at 2854.424 kb on - strand, within ABZR86_RS12740 at 2854.669 kb on + strand, within ABZR86_RS12740 at 2854.669 kb on + strand, within ABZR86_RS12740 at 2854.669 kb on + strand, within ABZR86_RS12740 at 2854.670 kb on - strand, within ABZR86_RS12740 at 2854.670 kb on - strand, within ABZR86_RS12740 at 2854.888 kb on + strand, within ABZR86_RS12740 at 2854.888 kb on + strand, within ABZR86_RS12740 at 2854.888 kb on + strand, within ABZR86_RS12740 at 2854.888 kb on + strand, within ABZR86_RS12740 at 2854.889 kb on - strand, within ABZR86_RS12740 at 2854.889 kb on - strand, within ABZR86_RS12740 at 2854.889 kb on - strand, within ABZR86_RS12740 at 2854.889 kb on - strand, within ABZR86_RS12740 at 2854.889 kb on - strand, within ABZR86_RS12740 at 2854.889 kb on - strand, within ABZR86_RS12740 at 2854.889 kb on - strand, within ABZR86_RS12740 at 2854.889 kb on - strand, within ABZR86_RS12740 at 2854.889 kb on - strand, within ABZR86_RS12740 at 2854.889 kb on - strand, within ABZR86_RS12740 at 2854.963 kb on + strand, within ABZR86_RS12740 at 2854.963 kb on + strand, within ABZR86_RS12740 at 2854.963 kb on + strand, within ABZR86_RS12740 at 2854.963 kb on + strand, within ABZR86_RS12740 at 2854.963 kb on + strand, within ABZR86_RS12740 at 2854.963 kb on + strand, within ABZR86_RS12740 at 2854.963 kb on + strand, within ABZR86_RS12740 at 2854.964 kb on - strand, within ABZR86_RS12740 at 2854.964 kb on - strand, within ABZR86_RS12740 at 2854.988 kb on - strand, within ABZR86_RS12740 at 2855.125 kb on + strand, within ABZR86_RS12740 at 2855.125 kb on + strand, within ABZR86_RS12740 at 2855.125 kb on + strand, within ABZR86_RS12740 at 2855.125 kb on + strand, within ABZR86_RS12740 at 2855.125 kb on + strand, within ABZR86_RS12740 at 2855.126 kb on - strand, within ABZR86_RS12740 at 2855.182 kb on + strand, within ABZR86_RS12740 at 2855.182 kb on + strand, within ABZR86_RS12740 at 2855.206 kb on + strand, within ABZR86_RS12740 at 2855.206 kb on + strand, within ABZR86_RS12740 at 2855.206 kb on + strand, within ABZR86_RS12740 at 2855.206 kb on + strand, within ABZR86_RS12740 at 2855.206 kb on + strand, within ABZR86_RS12740 at 2855.206 kb on + strand, within ABZR86_RS12740 at 2855.206 kb on + strand, within ABZR86_RS12740 at 2855.207 kb on - strand, within ABZR86_RS12740 at 2855.207 kb on - strand, within ABZR86_RS12740 at 2855.207 kb on - strand, within ABZR86_RS12740 at 2855.207 kb on - strand, within ABZR86_RS12740 at 2855.207 kb on - strand, within ABZR86_RS12740 at 2855.207 kb on - strand, within ABZR86_RS12740 at 2855.263 kb on + strand, within ABZR86_RS12740 at 2855.263 kb on + strand, within ABZR86_RS12740 at 2855.263 kb on + strand, within ABZR86_RS12740 at 2855.263 kb on + strand, within ABZR86_RS12740 at 2855.264 kb on - strand, within ABZR86_RS12740 at 2855.264 kb on - strand, within ABZR86_RS12740 at 2855.264 kb on - strand, within ABZR86_RS12740 at 2855.264 kb on - strand, within ABZR86_RS12740 at 2855.264 kb on - strand, within ABZR86_RS12740 at 2855.264 kb on - strand, within ABZR86_RS12740 at 2855.264 kb on - strand, within ABZR86_RS12740
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 2,852,970 + -0.6 2,852,971 - -0.4 2,852,971 - +0.8 2,853,157 + ABZR86_RS12730 0.11 -0.0 2,853,167 - ABZR86_RS12730 0.12 -0.5 2,853,319 + ABZR86_RS12730 0.31 +0.9 2,853,390 + ABZR86_RS12730 0.40 +0.1 2,853,391 - ABZR86_RS12730 0.40 -0.0 2,853,440 - ABZR86_RS12730 0.46 +0.5 2,853,440 - ABZR86_RS12730 0.46 +0.1 2,854,047 + ABZR86_RS12735 0.42 -0.7 2,854,047 + ABZR86_RS12735 0.42 -0.4 2,854,048 - ABZR86_RS12735 0.43 +0.4 2,854,048 - ABZR86_RS12735 0.43 +0.2 2,854,048 - ABZR86_RS12735 0.43 +0.7 2,854,155 + ABZR86_RS12735 0.68 -0.4 2,854,156 - ABZR86_RS12735 0.69 +0.1 2,854,156 - ABZR86_RS12735 0.69 -2.8 2,854,156 - ABZR86_RS12735 0.69 +0.5 2,854,156 - ABZR86_RS12735 0.69 -1.0 2,854,199 - -0.7 2,854,199 - +1.1 2,854,285 - +0.6 2,854,356 + -0.3 2,854,357 - +0.9 2,854,357 - +0.4 2,854,357 - -1.9 2,854,357 - -1.9 2,854,357 - -0.5 2,854,423 + ABZR86_RS12740 0.14 +0.4 2,854,424 - ABZR86_RS12740 0.14 -1.3 2,854,669 + ABZR86_RS12740 0.29 -1.1 2,854,669 + ABZR86_RS12740 0.29 -0.2 2,854,669 + ABZR86_RS12740 0.29 -0.0 2,854,670 - ABZR86_RS12740 0.29 +0.3 2,854,670 - ABZR86_RS12740 0.29 +0.1 2,854,888 + ABZR86_RS12740 0.43 -1.5 2,854,888 + ABZR86_RS12740 0.43 -0.6 2,854,888 + ABZR86_RS12740 0.43 -0.6 2,854,888 + ABZR86_RS12740 0.43 +0.6 2,854,889 - ABZR86_RS12740 0.43 -1.1 2,854,889 - ABZR86_RS12740 0.43 -0.4 2,854,889 - ABZR86_RS12740 0.43 +0.4 2,854,889 - ABZR86_RS12740 0.43 -0.0 2,854,889 - ABZR86_RS12740 0.43 -0.5 2,854,889 - ABZR86_RS12740 0.43 +1.1 2,854,889 - ABZR86_RS12740 0.43 +1.7 2,854,889 - ABZR86_RS12740 0.43 -1.3 2,854,889 - ABZR86_RS12740 0.43 -0.3 2,854,889 - ABZR86_RS12740 0.43 -2.8 2,854,963 + ABZR86_RS12740 0.48 +0.1 2,854,963 + ABZR86_RS12740 0.48 -1.3 2,854,963 + ABZR86_RS12740 0.48 -0.2 2,854,963 + ABZR86_RS12740 0.48 +0.8 2,854,963 + ABZR86_RS12740 0.48 +0.8 2,854,963 + ABZR86_RS12740 0.48 -0.1 2,854,963 + ABZR86_RS12740 0.48 +1.1 2,854,964 - ABZR86_RS12740 0.48 -0.5 2,854,964 - ABZR86_RS12740 0.48 -1.6 2,854,988 - ABZR86_RS12740 0.49 +0.2 2,855,125 + ABZR86_RS12740 0.58 -1.2 2,855,125 + ABZR86_RS12740 0.58 -0.1 2,855,125 + ABZR86_RS12740 0.58 +0.9 2,855,125 + ABZR86_RS12740 0.58 -2.8 2,855,125 + ABZR86_RS12740 0.58 -0.0 2,855,126 - ABZR86_RS12740 0.58 -1.4 2,855,182 + ABZR86_RS12740 0.61 +0.5 2,855,182 + ABZR86_RS12740 0.61 +2.6 2,855,206 + ABZR86_RS12740 0.63 -0.9 2,855,206 + ABZR86_RS12740 0.63 -0.7 2,855,206 + ABZR86_RS12740 0.63 -0.6 2,855,206 + ABZR86_RS12740 0.63 +0.4 2,855,206 + ABZR86_RS12740 0.63 -1.5 2,855,206 + ABZR86_RS12740 0.63 +0.2 2,855,206 + ABZR86_RS12740 0.63 -2.2 2,855,207 - ABZR86_RS12740 0.63 -0.2 2,855,207 - ABZR86_RS12740 0.63 -1.2 2,855,207 - ABZR86_RS12740 0.63 +0.9 2,855,207 - ABZR86_RS12740 0.63 -0.5 2,855,207 - ABZR86_RS12740 0.63 -0.3 2,855,207 - ABZR86_RS12740 0.63 -0.1 2,855,263 + ABZR86_RS12740 0.66 -0.0 2,855,263 + ABZR86_RS12740 0.66 +0.5 2,855,263 + ABZR86_RS12740 0.66 -1.4 2,855,263 + ABZR86_RS12740 0.66 +0.9 2,855,264 - ABZR86_RS12740 0.66 +1.5 2,855,264 - ABZR86_RS12740 0.66 +0.1 2,855,264 - ABZR86_RS12740 0.66 +0.2 2,855,264 - ABZR86_RS12740 0.66 +0.3 2,855,264 - ABZR86_RS12740 0.66 -0.5 2,855,264 - ABZR86_RS12740 0.66 +1.5 2,855,264 - ABZR86_RS12740 0.66 +0.1
Or see this region's nucleotide sequence