Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS09560 and ABZR86_RS09565 are separated by 54 nucleotides ABZR86_RS09565 and ABZR86_RS09570 are separated by 371 nucleotides ABZR86_RS09570 and ABZR86_RS09575 are separated by 5 nucleotides
ABZR86_RS09560: ABZR86_RS09560 - RtcB family protein, at 2,131,583 to 2,132,794
_RS09560
ABZR86_RS09565: ABZR86_RS09565 - slipin family protein, at 2,132,849 to 2,133,973
_RS09565
ABZR86_RS09570: ABZR86_RS09570 - tRNA-Val, at 2,134,345 to 2,134,415
_RS09570
ABZR86_RS09575: ABZR86_RS09575 - tRNA-Ala, at 2,134,421 to 2,134,491
_RS09575
Position (kb)
2132
2133
2134 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2131.849 kb on - strand, within ABZR86_RS09560 at 2131.849 kb on - strand, within ABZR86_RS09560 at 2131.849 kb on - strand, within ABZR86_RS09560 at 2131.849 kb on - strand, within ABZR86_RS09560 at 2131.849 kb on - strand, within ABZR86_RS09560 at 2131.962 kb on + strand, within ABZR86_RS09560 at 2131.962 kb on + strand, within ABZR86_RS09560 at 2131.962 kb on + strand, within ABZR86_RS09560 at 2131.962 kb on + strand, within ABZR86_RS09560 at 2131.962 kb on + strand, within ABZR86_RS09560 at 2131.962 kb on + strand, within ABZR86_RS09560 at 2131.962 kb on + strand, within ABZR86_RS09560 at 2131.962 kb on + strand, within ABZR86_RS09560 at 2131.962 kb on + strand, within ABZR86_RS09560 at 2131.962 kb on + strand, within ABZR86_RS09560 at 2131.962 kb on + strand, within ABZR86_RS09560 at 2131.962 kb on + strand, within ABZR86_RS09560 at 2131.962 kb on + strand, within ABZR86_RS09560 at 2131.963 kb on - strand, within ABZR86_RS09560 at 2131.963 kb on - strand, within ABZR86_RS09560 at 2131.963 kb on - strand, within ABZR86_RS09560 at 2131.963 kb on - strand, within ABZR86_RS09560 at 2131.963 kb on - strand, within ABZR86_RS09560 at 2131.963 kb on - strand, within ABZR86_RS09560 at 2131.963 kb on - strand, within ABZR86_RS09560 at 2131.963 kb on - strand, within ABZR86_RS09560 at 2132.100 kb on + strand, within ABZR86_RS09560 at 2132.100 kb on + strand, within ABZR86_RS09560 at 2132.101 kb on - strand, within ABZR86_RS09560 at 2132.208 kb on + strand, within ABZR86_RS09560 at 2132.208 kb on + strand, within ABZR86_RS09560 at 2132.209 kb on - strand, within ABZR86_RS09560 at 2132.209 kb on - strand, within ABZR86_RS09560 at 2132.209 kb on - strand, within ABZR86_RS09560 at 2132.209 kb on - strand, within ABZR86_RS09560 at 2132.686 kb on + strand at 2132.687 kb on - strand at 2132.768 kb on + strand at 2132.769 kb on - strand at 2132.789 kb on - strand at 2132.850 kb on + strand at 2132.851 kb on - strand at 2133.168 kb on + strand, within ABZR86_RS09565 at 2133.174 kb on + strand, within ABZR86_RS09565 at 2133.174 kb on + strand, within ABZR86_RS09565 at 2133.174 kb on + strand, within ABZR86_RS09565 at 2133.175 kb on - strand, within ABZR86_RS09565 at 2133.258 kb on + strand, within ABZR86_RS09565 at 2133.274 kb on - strand, within ABZR86_RS09565 at 2133.279 kb on + strand, within ABZR86_RS09565 at 2133.280 kb on - strand, within ABZR86_RS09565 at 2133.280 kb on - strand, within ABZR86_RS09565 at 2133.280 kb on - strand, within ABZR86_RS09565 at 2133.280 kb on - strand, within ABZR86_RS09565 at 2133.280 kb on - strand, within ABZR86_RS09565 at 2133.288 kb on + strand, within ABZR86_RS09565 at 2133.465 kb on + strand, within ABZR86_RS09565 at 2133.465 kb on + strand, within ABZR86_RS09565 at 2133.663 kb on + strand, within ABZR86_RS09565 at 2134.014 kb on - strand at 2134.014 kb on - strand at 2134.014 kb on - strand at 2134.065 kb on - strand at 2134.133 kb on + strand at 2134.483 kb on + strand, within ABZR86_RS09575 at 2134.484 kb on - strand, within ABZR86_RS09575 at 2134.484 kb on - strand, within ABZR86_RS09575 at 2134.484 kb on - strand, within ABZR86_RS09575 at 2134.522 kb on + strand at 2134.523 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 2,131,849 - ABZR86_RS09560 0.22 -1.0 2,131,849 - ABZR86_RS09560 0.22 -0.3 2,131,849 - ABZR86_RS09560 0.22 +0.3 2,131,849 - ABZR86_RS09560 0.22 +0.0 2,131,849 - ABZR86_RS09560 0.22 -1.2 2,131,962 + ABZR86_RS09560 0.31 -0.5 2,131,962 + ABZR86_RS09560 0.31 -0.2 2,131,962 + ABZR86_RS09560 0.31 +0.1 2,131,962 + ABZR86_RS09560 0.31 +0.4 2,131,962 + ABZR86_RS09560 0.31 -1.1 2,131,962 + ABZR86_RS09560 0.31 -0.7 2,131,962 + ABZR86_RS09560 0.31 -0.1 2,131,962 + ABZR86_RS09560 0.31 -0.5 2,131,962 + ABZR86_RS09560 0.31 -0.4 2,131,962 + ABZR86_RS09560 0.31 +0.6 2,131,962 + ABZR86_RS09560 0.31 -0.1 2,131,962 + ABZR86_RS09560 0.31 -0.4 2,131,962 + ABZR86_RS09560 0.31 -0.3 2,131,963 - ABZR86_RS09560 0.31 -0.5 2,131,963 - ABZR86_RS09560 0.31 +1.0 2,131,963 - ABZR86_RS09560 0.31 -1.7 2,131,963 - ABZR86_RS09560 0.31 -1.1 2,131,963 - ABZR86_RS09560 0.31 +0.8 2,131,963 - ABZR86_RS09560 0.31 -0.6 2,131,963 - ABZR86_RS09560 0.31 +0.1 2,131,963 - ABZR86_RS09560 0.31 -0.1 2,132,100 + ABZR86_RS09560 0.43 -0.3 2,132,100 + ABZR86_RS09560 0.43 +0.6 2,132,101 - ABZR86_RS09560 0.43 -1.6 2,132,208 + ABZR86_RS09560 0.52 -0.8 2,132,208 + ABZR86_RS09560 0.52 +0.1 2,132,209 - ABZR86_RS09560 0.52 -1.4 2,132,209 - ABZR86_RS09560 0.52 -0.1 2,132,209 - ABZR86_RS09560 0.52 -0.4 2,132,209 - ABZR86_RS09560 0.52 +0.0 2,132,686 + +1.1 2,132,687 - +0.5 2,132,768 + +1.0 2,132,769 - -2.8 2,132,789 - -0.3 2,132,850 + +2.6 2,132,851 - -0.4 2,133,168 + ABZR86_RS09565 0.28 +1.3 2,133,174 + ABZR86_RS09565 0.29 -0.0 2,133,174 + ABZR86_RS09565 0.29 +0.3 2,133,174 + ABZR86_RS09565 0.29 -0.9 2,133,175 - ABZR86_RS09565 0.29 +1.6 2,133,258 + ABZR86_RS09565 0.36 -0.1 2,133,274 - ABZR86_RS09565 0.38 +1.2 2,133,279 + ABZR86_RS09565 0.38 -0.2 2,133,280 - ABZR86_RS09565 0.38 +0.4 2,133,280 - ABZR86_RS09565 0.38 +0.1 2,133,280 - ABZR86_RS09565 0.38 -1.4 2,133,280 - ABZR86_RS09565 0.38 -1.2 2,133,280 - ABZR86_RS09565 0.38 +1.4 2,133,288 + ABZR86_RS09565 0.39 -0.0 2,133,465 + ABZR86_RS09565 0.55 +1.4 2,133,465 + ABZR86_RS09565 0.55 +0.6 2,133,663 + ABZR86_RS09565 0.72 +1.3 2,134,014 - +0.3 2,134,014 - -2.0 2,134,014 - +0.6 2,134,065 - -1.4 2,134,133 + +0.0 2,134,483 + ABZR86_RS09575 0.87 +0.6 2,134,484 - ABZR86_RS09575 0.89 +0.4 2,134,484 - ABZR86_RS09575 0.89 +0.2 2,134,484 - ABZR86_RS09575 0.89 -1.1 2,134,522 + -0.6 2,134,523 - -0.6
Or see this region's nucleotide sequence