Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS09555

Experiment: D-Fructose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS09550 and ABZR86_RS09555 are separated by 73 nucleotidesABZR86_RS09555 and ABZR86_RS09560 are separated by 90 nucleotides ABZR86_RS09550: ABZR86_RS09550 - hypothetical protein, at 2,127,787 to 2,130,213 _RS09550 ABZR86_RS09555: ABZR86_RS09555 - DUF3142 domain-containing protein, at 2,130,287 to 2,131,492 _RS09555 ABZR86_RS09560: ABZR86_RS09560 - RtcB family protein, at 2,131,583 to 2,132,794 _RS09560 Position (kb) 2130 2131 2132Strain fitness (log2 ratio) -3 -2 -1 0 1at 2129.381 kb on + strand, within ABZR86_RS09550at 2129.381 kb on + strand, within ABZR86_RS09550at 2129.483 kb on + strand, within ABZR86_RS09550at 2129.483 kb on + strand, within ABZR86_RS09550at 2129.483 kb on + strand, within ABZR86_RS09550at 2129.483 kb on + strand, within ABZR86_RS09550at 2129.484 kb on - strand, within ABZR86_RS09550at 2129.484 kb on - strand, within ABZR86_RS09550at 2129.484 kb on - strand, within ABZR86_RS09550at 2129.484 kb on - strand, within ABZR86_RS09550at 2129.669 kb on + strand, within ABZR86_RS09550at 2129.669 kb on + strand, within ABZR86_RS09550at 2129.669 kb on + strand, within ABZR86_RS09550at 2129.669 kb on + strand, within ABZR86_RS09550at 2129.670 kb on - strand, within ABZR86_RS09550at 2129.670 kb on - strand, within ABZR86_RS09550at 2129.670 kb on - strand, within ABZR86_RS09550at 2129.670 kb on - strand, within ABZR86_RS09550at 2129.670 kb on - strand, within ABZR86_RS09550at 2129.861 kb on + strand, within ABZR86_RS09550at 2129.862 kb on - strand, within ABZR86_RS09550at 2130.210 kb on - strandat 2130.210 kb on - strandat 2130.351 kb on + strandat 2130.420 kb on + strand, within ABZR86_RS09555at 2131.069 kb on - strand, within ABZR86_RS09555at 2131.315 kb on + strand, within ABZR86_RS09555at 2131.315 kb on + strand, within ABZR86_RS09555at 2131.315 kb on + strand, within ABZR86_RS09555at 2131.316 kb on - strand, within ABZR86_RS09555at 2131.383 kb on + strandat 2131.384 kb on - strandat 2131.384 kb on - strandat 2131.384 kb on - strandat 2131.384 kb on - strandat 2131.384 kb on - strandat 2131.384 kb on - strandat 2131.384 kb on - strandat 2131.384 kb on - strandat 2131.568 kb on + strandat 2131.569 kb on - strandat 2131.672 kb on - strandat 2131.848 kb on + strand, within ABZR86_RS09560at 2131.848 kb on + strand, within ABZR86_RS09560at 2131.848 kb on + strand, within ABZR86_RS09560at 2131.848 kb on + strand, within ABZR86_RS09560at 2131.849 kb on - strand, within ABZR86_RS09560at 2131.849 kb on - strand, within ABZR86_RS09560at 2131.849 kb on - strand, within ABZR86_RS09560at 2131.849 kb on - strand, within ABZR86_RS09560at 2131.849 kb on - strand, within ABZR86_RS09560at 2131.962 kb on + strand, within ABZR86_RS09560at 2131.962 kb on + strand, within ABZR86_RS09560at 2131.962 kb on + strand, within ABZR86_RS09560at 2131.962 kb on + strand, within ABZR86_RS09560at 2131.962 kb on + strand, within ABZR86_RS09560at 2131.962 kb on + strand, within ABZR86_RS09560at 2131.962 kb on + strand, within ABZR86_RS09560at 2131.962 kb on + strand, within ABZR86_RS09560at 2131.962 kb on + strand, within ABZR86_RS09560at 2131.962 kb on + strand, within ABZR86_RS09560at 2131.962 kb on + strand, within ABZR86_RS09560at 2131.962 kb on + strand, within ABZR86_RS09560at 2131.962 kb on + strand, within ABZR86_RS09560at 2131.963 kb on - strand, within ABZR86_RS09560at 2131.963 kb on - strand, within ABZR86_RS09560at 2131.963 kb on - strand, within ABZR86_RS09560at 2131.963 kb on - strand, within ABZR86_RS09560at 2131.963 kb on - strand, within ABZR86_RS09560at 2131.963 kb on - strand, within ABZR86_RS09560at 2131.963 kb on - strand, within ABZR86_RS09560at 2131.963 kb on - strand, within ABZR86_RS09560at 2132.100 kb on + strand, within ABZR86_RS09560at 2132.100 kb on + strand, within ABZR86_RS09560at 2132.101 kb on - strand, within ABZR86_RS09560at 2132.208 kb on + strand, within ABZR86_RS09560at 2132.208 kb on + strand, within ABZR86_RS09560at 2132.209 kb on - strand, within ABZR86_RS09560at 2132.209 kb on - strand, within ABZR86_RS09560at 2132.209 kb on - strand, within ABZR86_RS09560at 2132.209 kb on - strand, within ABZR86_RS09560

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Fructose (C)
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2,129,381 + ABZR86_RS09550 0.66 -2.2
2,129,381 + ABZR86_RS09550 0.66 -0.1
2,129,483 + ABZR86_RS09550 0.70 -0.2
2,129,483 + ABZR86_RS09550 0.70 +0.4
2,129,483 + ABZR86_RS09550 0.70 -0.1
2,129,483 + ABZR86_RS09550 0.70 +0.5
2,129,484 - ABZR86_RS09550 0.70 +0.3
2,129,484 - ABZR86_RS09550 0.70 +0.3
2,129,484 - ABZR86_RS09550 0.70 +0.5
2,129,484 - ABZR86_RS09550 0.70 +0.8
2,129,669 + ABZR86_RS09550 0.78 +1.2
2,129,669 + ABZR86_RS09550 0.78 -0.7
2,129,669 + ABZR86_RS09550 0.78 -0.5
2,129,669 + ABZR86_RS09550 0.78 +0.4
2,129,670 - ABZR86_RS09550 0.78 -0.8
2,129,670 - ABZR86_RS09550 0.78 -1.3
2,129,670 - ABZR86_RS09550 0.78 +1.0
2,129,670 - ABZR86_RS09550 0.78 -1.9
2,129,670 - ABZR86_RS09550 0.78 +0.3
2,129,861 + ABZR86_RS09550 0.85 -0.3
2,129,862 - ABZR86_RS09550 0.85 +1.2
2,130,210 - -0.3
2,130,210 - -2.2
2,130,351 + -0.1
2,130,420 + ABZR86_RS09555 0.11 +0.7
2,131,069 - ABZR86_RS09555 0.65 -1.2
2,131,315 + ABZR86_RS09555 0.85 -0.2
2,131,315 + ABZR86_RS09555 0.85 +0.6
2,131,315 + ABZR86_RS09555 0.85 -0.2
2,131,316 - ABZR86_RS09555 0.85 -0.5
2,131,383 + +0.5
2,131,384 - -3.5
2,131,384 - -0.6
2,131,384 - +0.2
2,131,384 - -0.5
2,131,384 - +0.7
2,131,384 - -1.5
2,131,384 - +0.1
2,131,384 - +0.6
2,131,568 + -0.2
2,131,569 - -2.6
2,131,672 - -1.5
2,131,848 + ABZR86_RS09560 0.22 -0.1
2,131,848 + ABZR86_RS09560 0.22 +1.2
2,131,848 + ABZR86_RS09560 0.22 +0.1
2,131,848 + ABZR86_RS09560 0.22 -0.1
2,131,849 - ABZR86_RS09560 0.22 -1.0
2,131,849 - ABZR86_RS09560 0.22 -0.3
2,131,849 - ABZR86_RS09560 0.22 +0.3
2,131,849 - ABZR86_RS09560 0.22 +0.0
2,131,849 - ABZR86_RS09560 0.22 -1.2
2,131,962 + ABZR86_RS09560 0.31 -0.5
2,131,962 + ABZR86_RS09560 0.31 -0.2
2,131,962 + ABZR86_RS09560 0.31 +0.1
2,131,962 + ABZR86_RS09560 0.31 +0.4
2,131,962 + ABZR86_RS09560 0.31 -1.1
2,131,962 + ABZR86_RS09560 0.31 -0.7
2,131,962 + ABZR86_RS09560 0.31 -0.1
2,131,962 + ABZR86_RS09560 0.31 -0.5
2,131,962 + ABZR86_RS09560 0.31 -0.4
2,131,962 + ABZR86_RS09560 0.31 +0.6
2,131,962 + ABZR86_RS09560 0.31 -0.1
2,131,962 + ABZR86_RS09560 0.31 -0.4
2,131,962 + ABZR86_RS09560 0.31 -0.3
2,131,963 - ABZR86_RS09560 0.31 -0.5
2,131,963 - ABZR86_RS09560 0.31 +1.0
2,131,963 - ABZR86_RS09560 0.31 -1.7
2,131,963 - ABZR86_RS09560 0.31 -1.1
2,131,963 - ABZR86_RS09560 0.31 +0.8
2,131,963 - ABZR86_RS09560 0.31 -0.6
2,131,963 - ABZR86_RS09560 0.31 +0.1
2,131,963 - ABZR86_RS09560 0.31 -0.1
2,132,100 + ABZR86_RS09560 0.43 -0.3
2,132,100 + ABZR86_RS09560 0.43 +0.6
2,132,101 - ABZR86_RS09560 0.43 -1.6
2,132,208 + ABZR86_RS09560 0.52 -0.8
2,132,208 + ABZR86_RS09560 0.52 +0.1
2,132,209 - ABZR86_RS09560 0.52 -1.4
2,132,209 - ABZR86_RS09560 0.52 -0.1
2,132,209 - ABZR86_RS09560 0.52 -0.4
2,132,209 - ABZR86_RS09560 0.52 +0.0

Or see this region's nucleotide sequence