Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS08780 and ABZR86_RS08785 are separated by 57 nucleotides ABZR86_RS08785 and ABZR86_RS08790 overlap by 8 nucleotides ABZR86_RS08790 and ABZR86_RS08795 are separated by 93 nucleotides ABZR86_RS08795 and ABZR86_RS08800 are separated by 84 nucleotides
ABZR86_RS08780: ABZR86_RS08780 - bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG, at 1,964,445 to 1,965,152
_RS08780
ABZR86_RS08785: ABZR86_RS08785 - YciI family protein, at 1,965,210 to 1,965,482
_RS08785
ABZR86_RS08790: ABZR86_RS08790 - TRZ/ATZ family hydrolase, at 1,965,475 to 1,966,815
_RS08790
ABZR86_RS08795: ABZR86_RS08795 - elongation factor P, at 1,966,909 to 1,967,478
_RS08795
ABZR86_RS08800: ABZR86_RS08800 - EF-P beta-lysylation protein EpmB, at 1,967,563 to 1,968,573
_RS08800
Position (kb)
1965
1966
1967 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1965.160 kb on - strand at 1965.175 kb on - strand at 1965.175 kb on - strand at 1965.175 kb on - strand at 1965.175 kb on - strand at 1965.175 kb on - strand at 1965.175 kb on - strand at 1965.175 kb on - strand at 1965.206 kb on + strand at 1965.206 kb on + strand at 1965.207 kb on - strand at 1965.207 kb on - strand at 1965.207 kb on - strand at 1965.207 kb on - strand at 1965.207 kb on - strand at 1965.257 kb on + strand, within ABZR86_RS08785 at 1965.257 kb on + strand, within ABZR86_RS08785 at 1965.257 kb on + strand, within ABZR86_RS08785 at 1965.258 kb on - strand, within ABZR86_RS08785 at 1965.258 kb on - strand, within ABZR86_RS08785 at 1965.258 kb on - strand, within ABZR86_RS08785 at 1965.259 kb on + strand, within ABZR86_RS08785 at 1965.259 kb on + strand, within ABZR86_RS08785 at 1965.259 kb on + strand, within ABZR86_RS08785 at 1965.259 kb on + strand, within ABZR86_RS08785 at 1965.259 kb on + strand, within ABZR86_RS08785 at 1965.259 kb on + strand, within ABZR86_RS08785 at 1965.260 kb on - strand, within ABZR86_RS08785 at 1965.260 kb on - strand, within ABZR86_RS08785 at 1965.260 kb on - strand, within ABZR86_RS08785 at 1965.260 kb on - strand, within ABZR86_RS08785 at 1965.281 kb on + strand, within ABZR86_RS08785 at 1965.282 kb on - strand, within ABZR86_RS08785 at 1965.282 kb on - strand, within ABZR86_RS08785 at 1965.319 kb on + strand, within ABZR86_RS08785 at 1965.320 kb on - strand, within ABZR86_RS08785 at 1965.320 kb on - strand, within ABZR86_RS08785 at 1965.454 kb on + strand, within ABZR86_RS08785 at 1965.455 kb on - strand at 1965.455 kb on - strand at 1965.626 kb on + strand, within ABZR86_RS08790 at 1965.627 kb on - strand, within ABZR86_RS08790 at 1965.627 kb on - strand, within ABZR86_RS08790 at 1965.627 kb on - strand, within ABZR86_RS08790 at 1965.627 kb on - strand, within ABZR86_RS08790 at 1965.627 kb on - strand, within ABZR86_RS08790 at 1965.627 kb on - strand, within ABZR86_RS08790 at 1965.782 kb on + strand, within ABZR86_RS08790 at 1965.783 kb on - strand, within ABZR86_RS08790 at 1966.223 kb on + strand, within ABZR86_RS08790 at 1966.223 kb on + strand, within ABZR86_RS08790 at 1966.223 kb on + strand, within ABZR86_RS08790 at 1966.223 kb on + strand, within ABZR86_RS08790 at 1966.223 kb on + strand, within ABZR86_RS08790 at 1966.223 kb on + strand, within ABZR86_RS08790 at 1966.223 kb on + strand, within ABZR86_RS08790 at 1966.223 kb on + strand, within ABZR86_RS08790 at 1966.223 kb on + strand, within ABZR86_RS08790 at 1966.224 kb on - strand, within ABZR86_RS08790 at 1966.224 kb on - strand, within ABZR86_RS08790 at 1966.224 kb on - strand, within ABZR86_RS08790 at 1966.224 kb on - strand, within ABZR86_RS08790 at 1966.224 kb on - strand, within ABZR86_RS08790 at 1966.304 kb on + strand, within ABZR86_RS08790 at 1966.304 kb on + strand, within ABZR86_RS08790 at 1966.305 kb on - strand, within ABZR86_RS08790 at 1966.385 kb on + strand, within ABZR86_RS08790 at 1966.385 kb on + strand, within ABZR86_RS08790 at 1966.385 kb on + strand, within ABZR86_RS08790 at 1966.386 kb on - strand, within ABZR86_RS08790 at 1966.386 kb on - strand, within ABZR86_RS08790 at 1966.415 kb on + strand, within ABZR86_RS08790 at 1966.416 kb on - strand, within ABZR86_RS08790 at 1966.416 kb on - strand, within ABZR86_RS08790 at 1966.596 kb on + strand, within ABZR86_RS08790 at 1966.596 kb on + strand, within ABZR86_RS08790 at 1966.597 kb on - strand, within ABZR86_RS08790 at 1966.597 kb on - strand, within ABZR86_RS08790 at 1966.597 kb on - strand, within ABZR86_RS08790 at 1966.597 kb on - strand, within ABZR86_RS08790 at 1966.661 kb on + strand, within ABZR86_RS08790 at 1966.662 kb on - strand, within ABZR86_RS08790 at 1966.820 kb on + strand at 1966.821 kb on - strand at 1966.850 kb on + strand at 1966.850 kb on + strand at 1966.851 kb on - strand at 1966.851 kb on - strand at 1966.852 kb on + strand at 1966.853 kb on - strand at 1966.853 kb on - strand at 1966.910 kb on + strand at 1966.914 kb on + strand at 1966.915 kb on - strand at 1967.518 kb on - strand at 1967.518 kb on - strand at 1967.522 kb on + strand at 1967.523 kb on - strand at 1967.591 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 1,965,160 - +0.9 1,965,175 - -2.0 1,965,175 - -0.7 1,965,175 - -0.5 1,965,175 - -0.7 1,965,175 - -0.4 1,965,175 - +0.7 1,965,175 - +2.1 1,965,206 + +2.2 1,965,206 + +1.0 1,965,207 - -0.2 1,965,207 - +1.6 1,965,207 - -0.6 1,965,207 - +0.7 1,965,207 - +0.2 1,965,257 + ABZR86_RS08785 0.17 +0.2 1,965,257 + ABZR86_RS08785 0.17 +1.1 1,965,257 + ABZR86_RS08785 0.17 -0.5 1,965,258 - ABZR86_RS08785 0.18 -0.2 1,965,258 - ABZR86_RS08785 0.18 +2.5 1,965,258 - ABZR86_RS08785 0.18 +0.5 1,965,259 + ABZR86_RS08785 0.18 +1.2 1,965,259 + ABZR86_RS08785 0.18 -2.1 1,965,259 + ABZR86_RS08785 0.18 -0.0 1,965,259 + ABZR86_RS08785 0.18 +0.1 1,965,259 + ABZR86_RS08785 0.18 -2.0 1,965,259 + ABZR86_RS08785 0.18 -0.3 1,965,260 - ABZR86_RS08785 0.18 +0.2 1,965,260 - ABZR86_RS08785 0.18 +0.9 1,965,260 - ABZR86_RS08785 0.18 -1.6 1,965,260 - ABZR86_RS08785 0.18 +1.9 1,965,281 + ABZR86_RS08785 0.26 +0.9 1,965,282 - ABZR86_RS08785 0.26 +0.1 1,965,282 - ABZR86_RS08785 0.26 -1.3 1,965,319 + ABZR86_RS08785 0.40 -0.2 1,965,320 - ABZR86_RS08785 0.40 -1.8 1,965,320 - ABZR86_RS08785 0.40 -1.0 1,965,454 + ABZR86_RS08785 0.89 +0.7 1,965,455 - -1.7 1,965,455 - -1.5 1,965,626 + ABZR86_RS08790 0.11 +0.9 1,965,627 - ABZR86_RS08790 0.11 -1.0 1,965,627 - ABZR86_RS08790 0.11 -2.1 1,965,627 - ABZR86_RS08790 0.11 +0.3 1,965,627 - ABZR86_RS08790 0.11 +0.5 1,965,627 - ABZR86_RS08790 0.11 -0.0 1,965,627 - ABZR86_RS08790 0.11 +1.0 1,965,782 + ABZR86_RS08790 0.23 +1.6 1,965,783 - ABZR86_RS08790 0.23 -0.9 1,966,223 + ABZR86_RS08790 0.56 +0.8 1,966,223 + ABZR86_RS08790 0.56 +1.6 1,966,223 + ABZR86_RS08790 0.56 +0.9 1,966,223 + ABZR86_RS08790 0.56 +2.8 1,966,223 + ABZR86_RS08790 0.56 +0.0 1,966,223 + ABZR86_RS08790 0.56 +1.1 1,966,223 + ABZR86_RS08790 0.56 +1.5 1,966,223 + ABZR86_RS08790 0.56 -0.5 1,966,223 + ABZR86_RS08790 0.56 +1.1 1,966,224 - ABZR86_RS08790 0.56 +0.7 1,966,224 - ABZR86_RS08790 0.56 +0.1 1,966,224 - ABZR86_RS08790 0.56 -1.8 1,966,224 - ABZR86_RS08790 0.56 -2.0 1,966,224 - ABZR86_RS08790 0.56 -1.5 1,966,304 + ABZR86_RS08790 0.62 -1.7 1,966,304 + ABZR86_RS08790 0.62 -0.4 1,966,305 - ABZR86_RS08790 0.62 -0.9 1,966,385 + ABZR86_RS08790 0.68 +2.2 1,966,385 + ABZR86_RS08790 0.68 +1.1 1,966,385 + ABZR86_RS08790 0.68 -1.3 1,966,386 - ABZR86_RS08790 0.68 -2.0 1,966,386 - ABZR86_RS08790 0.68 -0.1 1,966,415 + ABZR86_RS08790 0.70 -0.2 1,966,416 - ABZR86_RS08790 0.70 -2.0 1,966,416 - ABZR86_RS08790 0.70 +0.8 1,966,596 + ABZR86_RS08790 0.84 -1.5 1,966,596 + ABZR86_RS08790 0.84 +0.5 1,966,597 - ABZR86_RS08790 0.84 +0.2 1,966,597 - ABZR86_RS08790 0.84 +1.1 1,966,597 - ABZR86_RS08790 0.84 -0.7 1,966,597 - ABZR86_RS08790 0.84 -1.6 1,966,661 + ABZR86_RS08790 0.88 -1.1 1,966,662 - ABZR86_RS08790 0.89 +0.2 1,966,820 + +0.1 1,966,821 - -0.4 1,966,850 + -2.5 1,966,850 + -0.1 1,966,851 - -1.1 1,966,851 - -0.9 1,966,852 + -0.9 1,966,853 - -0.4 1,966,853 - +0.5 1,966,910 + +0.0 1,966,914 + -2.7 1,966,915 - -0.7 1,967,518 - -1.4 1,967,518 - +0.3 1,967,522 + +3.6 1,967,523 - +1.0 1,967,591 + -0.4
Or see this region's nucleotide sequence