Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS06295 and ABZR86_RS06300 are separated by 6 nucleotides ABZR86_RS06300 and ABZR86_RS06305 are separated by 140 nucleotides ABZR86_RS06305 and ABZR86_RS06310 are separated by 188 nucleotides ABZR86_RS06310 and ABZR86_RS06315 are separated by 4 nucleotides
ABZR86_RS06295: ABZR86_RS06295 - biopolymer transporter ExbD, at 1,405,416 to 1,405,847
_RS06295
ABZR86_RS06300: ABZR86_RS06300 - MotA/TolQ/ExbB proton channel family protein, at 1,405,854 to 1,406,489
_RS06300
ABZR86_RS06305: ABZR86_RS06305 - DNA internalization-related competence protein ComEC/Rec2, at 1,406,630 to 1,408,879
_RS06305
ABZR86_RS06310: ABZR86_RS06310 - lipoprotein-releasing ABC transporter ATP-binding protein LolD, at 1,409,068 to 1,409,760
_RS06310
ABZR86_RS06315: ABZR86_RS06315 - lipoprotein-releasing ABC transporter permease subunit, at 1,409,765 to 1,411,009
_RS06315
Position (kb)
1406
1407
1408
1409 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1405.633 kb on + strand, within ABZR86_RS06295 at 1405.633 kb on + strand, within ABZR86_RS06295 at 1405.633 kb on + strand, within ABZR86_RS06295 at 1405.633 kb on + strand, within ABZR86_RS06295 at 1405.634 kb on - strand, within ABZR86_RS06295 at 1405.634 kb on - strand, within ABZR86_RS06295 at 1405.636 kb on + strand, within ABZR86_RS06295 at 1405.636 kb on + strand, within ABZR86_RS06295 at 1405.637 kb on - strand, within ABZR86_RS06295 at 1405.637 kb on - strand, within ABZR86_RS06295 at 1406.000 kb on - strand, within ABZR86_RS06300 at 1406.189 kb on - strand, within ABZR86_RS06300 at 1406.509 kb on - strand at 1406.545 kb on + strand at 1406.545 kb on + strand at 1406.546 kb on - strand at 1406.546 kb on - strand at 1406.546 kb on - strand at 1406.546 kb on - strand at 1406.546 kb on - strand at 1406.585 kb on + strand at 1406.586 kb on - strand at 1406.631 kb on + strand at 1406.631 kb on + strand at 1406.632 kb on - strand at 1406.632 kb on - strand at 1406.632 kb on - strand at 1406.632 kb on - strand at 1406.632 kb on - strand at 1406.632 kb on - strand at 1406.632 kb on - strand at 1406.632 kb on - strand at 1406.760 kb on + strand at 1406.760 kb on + strand at 1406.761 kb on - strand at 1406.761 kb on - strand at 1406.761 kb on - strand at 1407.543 kb on + strand, within ABZR86_RS06305 at 1407.544 kb on - strand, within ABZR86_RS06305 at 1407.858 kb on + strand, within ABZR86_RS06305 at 1407.858 kb on + strand, within ABZR86_RS06305 at 1407.858 kb on + strand, within ABZR86_RS06305 at 1407.858 kb on + strand, within ABZR86_RS06305 at 1407.858 kb on + strand, within ABZR86_RS06305 at 1407.858 kb on + strand, within ABZR86_RS06305 at 1407.858 kb on + strand, within ABZR86_RS06305 at 1407.859 kb on - strand, within ABZR86_RS06305 at 1407.859 kb on - strand, within ABZR86_RS06305 at 1407.859 kb on - strand, within ABZR86_RS06305 at 1407.859 kb on - strand, within ABZR86_RS06305 at 1407.859 kb on - strand, within ABZR86_RS06305 at 1408.143 kb on + strand, within ABZR86_RS06305 at 1408.143 kb on + strand, within ABZR86_RS06305 at 1408.278 kb on - strand, within ABZR86_RS06305 at 1408.416 kb on + strand, within ABZR86_RS06305 at 1408.417 kb on - strand, within ABZR86_RS06305 at 1408.417 kb on - strand, within ABZR86_RS06305 at 1408.417 kb on - strand, within ABZR86_RS06305 at 1408.417 kb on - strand, within ABZR86_RS06305 at 1408.992 kb on - strand at 1409.015 kb on + strand at 1409.015 kb on + strand at 1409.016 kb on - strand at 1409.016 kb on - strand at 1409.016 kb on - strand at 1409.016 kb on - strand at 1409.016 kb on - strand at 1409.101 kb on - strand at 1409.767 kb on - strand at 1409.767 kb on - strand at 1409.773 kb on - strand at 1409.773 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 1,405,633 + ABZR86_RS06295 0.50 -1.4 1,405,633 + ABZR86_RS06295 0.50 -1.7 1,405,633 + ABZR86_RS06295 0.50 +1.5 1,405,633 + ABZR86_RS06295 0.50 -1.7 1,405,634 - ABZR86_RS06295 0.50 -1.1 1,405,634 - ABZR86_RS06295 0.50 -1.2 1,405,636 + ABZR86_RS06295 0.51 +0.5 1,405,636 + ABZR86_RS06295 0.51 +1.5 1,405,637 - ABZR86_RS06295 0.51 -1.4 1,405,637 - ABZR86_RS06295 0.51 -0.2 1,406,000 - ABZR86_RS06300 0.23 -0.8 1,406,189 - ABZR86_RS06300 0.53 -2.0 1,406,509 - -0.5 1,406,545 + +0.8 1,406,545 + +0.4 1,406,546 - -1.6 1,406,546 - -1.0 1,406,546 - -0.1 1,406,546 - +0.4 1,406,546 - +0.9 1,406,585 + -0.1 1,406,586 - -0.6 1,406,631 + -0.3 1,406,631 + -0.5 1,406,632 - -1.3 1,406,632 - +1.1 1,406,632 - -0.1 1,406,632 - +0.8 1,406,632 - -0.5 1,406,632 - -0.1 1,406,632 - +1.3 1,406,632 - -1.4 1,406,760 + -0.5 1,406,760 + +0.9 1,406,761 - -2.0 1,406,761 - -0.5 1,406,761 - -0.7 1,407,543 + ABZR86_RS06305 0.41 -0.7 1,407,544 - ABZR86_RS06305 0.41 +2.6 1,407,858 + ABZR86_RS06305 0.55 +0.1 1,407,858 + ABZR86_RS06305 0.55 +1.0 1,407,858 + ABZR86_RS06305 0.55 -1.0 1,407,858 + ABZR86_RS06305 0.55 -1.5 1,407,858 + ABZR86_RS06305 0.55 +0.3 1,407,858 + ABZR86_RS06305 0.55 -0.3 1,407,858 + ABZR86_RS06305 0.55 +1.4 1,407,859 - ABZR86_RS06305 0.55 +0.6 1,407,859 - ABZR86_RS06305 0.55 +0.0 1,407,859 - ABZR86_RS06305 0.55 -1.7 1,407,859 - ABZR86_RS06305 0.55 -0.1 1,407,859 - ABZR86_RS06305 0.55 -1.7 1,408,143 + ABZR86_RS06305 0.67 +1.3 1,408,143 + ABZR86_RS06305 0.67 -0.3 1,408,278 - ABZR86_RS06305 0.73 +0.9 1,408,416 + ABZR86_RS06305 0.79 -1.1 1,408,417 - ABZR86_RS06305 0.79 +0.8 1,408,417 - ABZR86_RS06305 0.79 -1.0 1,408,417 - ABZR86_RS06305 0.79 +0.7 1,408,417 - ABZR86_RS06305 0.79 +0.6 1,408,992 - -0.5 1,409,015 + -0.1 1,409,015 + -0.6 1,409,016 - -0.9 1,409,016 - -0.1 1,409,016 - -0.5 1,409,016 - +1.5 1,409,016 - -1.5 1,409,101 - +0.0 1,409,767 - +0.5 1,409,767 - +0.5 1,409,773 - -1.9 1,409,773 - -1.6
Or see this region's nucleotide sequence