Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS04830 and ABZR86_RS04835 are separated by 161 nucleotides ABZR86_RS04835 and ABZR86_RS04840 are separated by 92 nucleotides ABZR86_RS04840 and ABZR86_RS04845 are separated by 214 nucleotides ABZR86_RS04845 and ABZR86_RS04850 are separated by 35 nucleotides
ABZR86_RS04830: ABZR86_RS04830 - LysR family transcriptional regulator, at 1,080,482 to 1,081,399
_RS04830
ABZR86_RS04835: ABZR86_RS04835 - hypothetical protein, at 1,081,561 to 1,081,920
_RS04835
ABZR86_RS04840: ABZR86_RS04840 - serine hydrolase, at 1,082,013 to 1,083,386
_RS04840
ABZR86_RS04845: ABZR86_RS04845 - hypothetical protein, at 1,083,601 to 1,084,062
_RS04845
ABZR86_RS04850: ABZR86_RS04850 - LytTR family DNA-binding domain-containing protein, at 1,084,098 to 1,084,853
_RS04850
Position (kb) 1082
1083
1084 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1081.106 kb on + strand, within ABZR86_RS04830 at 1081.106 kb on + strand, within ABZR86_RS04830 at 1081.106 kb on + strand, within ABZR86_RS04830 at 1081.107 kb on - strand, within ABZR86_RS04830 at 1081.107 kb on - strand, within ABZR86_RS04830 at 1081.107 kb on - strand, within ABZR86_RS04830 at 1081.313 kb on + strand at 1081.313 kb on + strand at 1081.313 kb on + strand at 1081.314 kb on - strand at 1081.322 kb on + strand at 1081.323 kb on - strand at 1081.550 kb on + strand at 1081.574 kb on + strand at 1081.575 kb on - strand at 1081.732 kb on + strand, within ABZR86_RS04835 at 1081.792 kb on + strand, within ABZR86_RS04835 at 1081.793 kb on - strand, within ABZR86_RS04835 at 1081.895 kb on - strand at 1081.906 kb on + strand at 1081.907 kb on - strand at 1081.908 kb on + strand at 1082.021 kb on - strand at 1082.021 kb on - strand at 1082.068 kb on + strand at 1082.128 kb on + strand at 1082.128 kb on + strand at 1082.129 kb on - strand at 1082.129 kb on - strand at 1082.377 kb on + strand, within ABZR86_RS04840 at 1082.377 kb on + strand, within ABZR86_RS04840 at 1082.377 kb on + strand, within ABZR86_RS04840 at 1082.377 kb on + strand, within ABZR86_RS04840 at 1082.378 kb on - strand, within ABZR86_RS04840 at 1082.378 kb on - strand, within ABZR86_RS04840 at 1082.378 kb on - strand, within ABZR86_RS04840 at 1082.378 kb on - strand, within ABZR86_RS04840 at 1082.378 kb on - strand, within ABZR86_RS04840 at 1082.378 kb on - strand, within ABZR86_RS04840 at 1082.378 kb on - strand, within ABZR86_RS04840 at 1082.494 kb on - strand, within ABZR86_RS04840 at 1082.542 kb on + strand, within ABZR86_RS04840 at 1082.543 kb on - strand, within ABZR86_RS04840 at 1083.100 kb on + strand, within ABZR86_RS04840 at 1083.100 kb on + strand, within ABZR86_RS04840 at 1083.100 kb on + strand, within ABZR86_RS04840 at 1083.535 kb on - strand at 1083.623 kb on - strand at 1083.623 kb on - strand at 1083.623 kb on - strand at 1083.623 kb on - strand at 1083.933 kb on + strand, within ABZR86_RS04845 at 1084.099 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 1,081,106 + ABZR86_RS04830 0.68 +0.2 1,081,106 + ABZR86_RS04830 0.68 +1.6 1,081,106 + ABZR86_RS04830 0.68 +1.6 1,081,107 - ABZR86_RS04830 0.68 -0.3 1,081,107 - ABZR86_RS04830 0.68 -0.3 1,081,107 - ABZR86_RS04830 0.68 -0.2 1,081,313 + -1.0 1,081,313 + -0.2 1,081,313 + -1.3 1,081,314 - +0.6 1,081,322 + +0.7 1,081,323 - -0.3 1,081,550 + -1.2 1,081,574 + +0.4 1,081,575 - -0.1 1,081,732 + ABZR86_RS04835 0.47 -0.9 1,081,792 + ABZR86_RS04835 0.64 +0.5 1,081,793 - ABZR86_RS04835 0.64 +0.3 1,081,895 - +1.4 1,081,906 + -2.4 1,081,907 - -0.4 1,081,908 + -0.0 1,082,021 - +2.1 1,082,021 - +0.4 1,082,068 + -2.0 1,082,128 + +0.6 1,082,128 + +0.8 1,082,129 - -3.0 1,082,129 - -0.2 1,082,377 + ABZR86_RS04840 0.26 +0.6 1,082,377 + ABZR86_RS04840 0.26 -0.7 1,082,377 + ABZR86_RS04840 0.26 +0.6 1,082,377 + ABZR86_RS04840 0.26 -0.5 1,082,378 - ABZR86_RS04840 0.27 -0.2 1,082,378 - ABZR86_RS04840 0.27 -0.8 1,082,378 - ABZR86_RS04840 0.27 +0.3 1,082,378 - ABZR86_RS04840 0.27 -1.5 1,082,378 - ABZR86_RS04840 0.27 -1.4 1,082,378 - ABZR86_RS04840 0.27 +0.0 1,082,378 - ABZR86_RS04840 0.27 -0.7 1,082,494 - ABZR86_RS04840 0.35 -0.4 1,082,542 + ABZR86_RS04840 0.39 +0.2 1,082,543 - ABZR86_RS04840 0.39 -2.3 1,083,100 + ABZR86_RS04840 0.79 +1.1 1,083,100 + ABZR86_RS04840 0.79 -0.5 1,083,100 + ABZR86_RS04840 0.79 -0.6 1,083,535 - -0.9 1,083,623 - +0.2 1,083,623 - -1.3 1,083,623 - +0.0 1,083,623 - -0.7 1,083,933 + ABZR86_RS04845 0.72 -0.2 1,084,099 + -0.8
Or see this region's nucleotide sequence