Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS04185 and ABZR86_RS04190 are separated by 4 nucleotides ABZR86_RS04190 and ABZR86_RS04195 are separated by 29 nucleotides
ABZR86_RS04185: ABZR86_RS04185 - NAD(P)H-quinone oxidoreductase, at 933,682 to 934,686
_RS04185
ABZR86_RS04190: ABZR86_RS04190 - MaoC family dehydratase, at 934,691 to 935,224
_RS04190
ABZR86_RS04195: ABZR86_RS04195 - aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme, at 935,254 to 936,615
_RS04195
Position (kb) 934
935
936 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 933.788 kb on + strand, within ABZR86_RS04185 at 933.788 kb on + strand, within ABZR86_RS04185 at 933.789 kb on - strand, within ABZR86_RS04185 at 933.789 kb on - strand, within ABZR86_RS04185 at 933.789 kb on - strand, within ABZR86_RS04185 at 933.811 kb on + strand, within ABZR86_RS04185 at 933.811 kb on + strand, within ABZR86_RS04185 at 933.812 kb on - strand, within ABZR86_RS04185 at 933.812 kb on - strand, within ABZR86_RS04185 at 934.028 kb on + strand, within ABZR86_RS04185 at 934.254 kb on + strand, within ABZR86_RS04185 at 934.254 kb on + strand, within ABZR86_RS04185 at 934.420 kb on + strand, within ABZR86_RS04185 at 934.529 kb on - strand, within ABZR86_RS04185 at 934.535 kb on + strand, within ABZR86_RS04185 at 934.536 kb on - strand, within ABZR86_RS04185 at 934.670 kb on + strand at 934.670 kb on + strand at 934.670 kb on + strand at 934.671 kb on - strand at 934.764 kb on - strand, within ABZR86_RS04190 at 934.764 kb on - strand, within ABZR86_RS04190 at 934.764 kb on - strand, within ABZR86_RS04190 at 934.764 kb on - strand, within ABZR86_RS04190 at 934.863 kb on + strand, within ABZR86_RS04190 at 934.863 kb on + strand, within ABZR86_RS04190 at 934.863 kb on + strand, within ABZR86_RS04190 at 934.863 kb on + strand, within ABZR86_RS04190 at 934.864 kb on - strand, within ABZR86_RS04190 at 934.864 kb on - strand, within ABZR86_RS04190 at 934.864 kb on - strand, within ABZR86_RS04190 at 934.864 kb on - strand, within ABZR86_RS04190 at 934.864 kb on - strand, within ABZR86_RS04190 at 934.864 kb on - strand, within ABZR86_RS04190 at 935.015 kb on - strand, within ABZR86_RS04190 at 935.015 kb on - strand, within ABZR86_RS04190 at 935.025 kb on + strand, within ABZR86_RS04190 at 935.037 kb on - strand, within ABZR86_RS04190 at 935.148 kb on + strand, within ABZR86_RS04190 at 935.149 kb on - strand, within ABZR86_RS04190 at 935.204 kb on + strand at 935.204 kb on + strand at 935.387 kb on + strand at 935.387 kb on + strand at 935.387 kb on + strand at 935.388 kb on - strand at 935.388 kb on - strand at 935.403 kb on - strand, within ABZR86_RS04195 at 935.642 kb on + strand, within ABZR86_RS04195 at 935.762 kb on + strand, within ABZR86_RS04195 at 935.762 kb on + strand, within ABZR86_RS04195 at 935.763 kb on - strand, within ABZR86_RS04195 at 935.883 kb on - strand, within ABZR86_RS04195 at 935.883 kb on - strand, within ABZR86_RS04195 at 935.883 kb on - strand, within ABZR86_RS04195 at 935.900 kb on + strand, within ABZR86_RS04195 at 935.900 kb on + strand, within ABZR86_RS04195 at 935.901 kb on - strand, within ABZR86_RS04195 at 935.901 kb on - strand, within ABZR86_RS04195 at 935.915 kb on + strand, within ABZR86_RS04195 at 935.916 kb on - strand, within ABZR86_RS04195 at 935.939 kb on + strand, within ABZR86_RS04195 at 935.939 kb on + strand, within ABZR86_RS04195 at 935.939 kb on + strand, within ABZR86_RS04195 at 935.999 kb on - strand, within ABZR86_RS04195 at 936.003 kb on - strand, within ABZR86_RS04195 at 936.003 kb on - strand, within ABZR86_RS04195 at 936.003 kb on - strand, within ABZR86_RS04195 at 936.003 kb on - strand, within ABZR86_RS04195 at 936.143 kb on + strand, within ABZR86_RS04195 at 936.144 kb on - strand, within ABZR86_RS04195 at 936.144 kb on - strand, within ABZR86_RS04195
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 933,788 + ABZR86_RS04185 0.11 +0.7 933,788 + ABZR86_RS04185 0.11 +1.3 933,789 - ABZR86_RS04185 0.11 +0.6 933,789 - ABZR86_RS04185 0.11 +0.8 933,789 - ABZR86_RS04185 0.11 -0.5 933,811 + ABZR86_RS04185 0.13 -0.3 933,811 + ABZR86_RS04185 0.13 +0.6 933,812 - ABZR86_RS04185 0.13 -0.8 933,812 - ABZR86_RS04185 0.13 -0.5 934,028 + ABZR86_RS04185 0.34 -0.0 934,254 + ABZR86_RS04185 0.57 -0.8 934,254 + ABZR86_RS04185 0.57 -0.8 934,420 + ABZR86_RS04185 0.73 +0.5 934,529 - ABZR86_RS04185 0.84 +0.2 934,535 + ABZR86_RS04185 0.85 +1.2 934,536 - ABZR86_RS04185 0.85 -0.7 934,670 + +1.2 934,670 + -0.1 934,670 + +0.8 934,671 - -0.7 934,764 - ABZR86_RS04190 0.14 -0.3 934,764 - ABZR86_RS04190 0.14 -0.5 934,764 - ABZR86_RS04190 0.14 +0.4 934,764 - ABZR86_RS04190 0.14 -0.3 934,863 + ABZR86_RS04190 0.32 -0.3 934,863 + ABZR86_RS04190 0.32 -0.2 934,863 + ABZR86_RS04190 0.32 +0.5 934,863 + ABZR86_RS04190 0.32 -0.2 934,864 - ABZR86_RS04190 0.32 +1.3 934,864 - ABZR86_RS04190 0.32 +0.1 934,864 - ABZR86_RS04190 0.32 -0.3 934,864 - ABZR86_RS04190 0.32 +0.2 934,864 - ABZR86_RS04190 0.32 +0.8 934,864 - ABZR86_RS04190 0.32 -3.3 935,015 - ABZR86_RS04190 0.61 -0.4 935,015 - ABZR86_RS04190 0.61 -2.9 935,025 + ABZR86_RS04190 0.63 -0.9 935,037 - ABZR86_RS04190 0.65 +0.6 935,148 + ABZR86_RS04190 0.86 -1.7 935,149 - ABZR86_RS04190 0.86 -0.5 935,204 + +0.4 935,204 + -1.0 935,387 + +0.9 935,387 + -1.7 935,387 + +1.9 935,388 - +0.4 935,388 - -1.6 935,403 - ABZR86_RS04195 0.11 +0.9 935,642 + ABZR86_RS04195 0.28 -1.6 935,762 + ABZR86_RS04195 0.37 +1.0 935,762 + ABZR86_RS04195 0.37 +0.3 935,763 - ABZR86_RS04195 0.37 +0.7 935,883 - ABZR86_RS04195 0.46 +0.6 935,883 - ABZR86_RS04195 0.46 +0.6 935,883 - ABZR86_RS04195 0.46 +1.0 935,900 + ABZR86_RS04195 0.47 -0.8 935,900 + ABZR86_RS04195 0.47 +1.5 935,901 - ABZR86_RS04195 0.48 +1.5 935,901 - ABZR86_RS04195 0.48 -1.5 935,915 + ABZR86_RS04195 0.49 -1.4 935,916 - ABZR86_RS04195 0.49 -1.1 935,939 + ABZR86_RS04195 0.50 -2.5 935,939 + ABZR86_RS04195 0.50 -0.5 935,939 + ABZR86_RS04195 0.50 +0.4 935,999 - ABZR86_RS04195 0.55 +1.0 936,003 - ABZR86_RS04195 0.55 -0.2 936,003 - ABZR86_RS04195 0.55 +0.8 936,003 - ABZR86_RS04195 0.55 +1.8 936,003 - ABZR86_RS04195 0.55 -2.7 936,143 + ABZR86_RS04195 0.65 -0.5 936,144 - ABZR86_RS04195 0.65 +1.2 936,144 - ABZR86_RS04195 0.65 +0.4
Or see this region's nucleotide sequence