Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS00400 and ABZR86_RS00405 are separated by 43 nucleotides ABZR86_RS00405 and ABZR86_RS00410 are separated by 127 nucleotides ABZR86_RS00410 and ABZR86_RS00415 are separated by 86 nucleotides
ABZR86_RS00400: ABZR86_RS00400 - GNAT family N-acetyltransferase, at 77,854 to 78,144
_RS00400
ABZR86_RS00405: ABZR86_RS00405 - DUF1345 domain-containing protein, at 78,188 to 78,865
_RS00405
ABZR86_RS00410: ABZR86_RS00410 - YajQ family cyclic di-GMP-binding protein, at 78,993 to 79,475
_RS00410
ABZR86_RS00415: ABZR86_RS00415 - NAD(P)/FAD-dependent oxidoreductase, at 79,562 to 80,740
_RS00415
Position (kb) 78
79
80 Strain fitness (log2 ratio) -2
-1
0
1
2 at 78.088 kb on + strand, within ABZR86_RS00400 at 78.089 kb on - strand, within ABZR86_RS00400 at 78.121 kb on + strand at 78.122 kb on - strand at 78.154 kb on + strand at 78.242 kb on + strand at 78.371 kb on + strand, within ABZR86_RS00405 at 78.493 kb on - strand, within ABZR86_RS00405 at 78.618 kb on - strand, within ABZR86_RS00405 at 78.630 kb on - strand, within ABZR86_RS00405 at 78.630 kb on - strand, within ABZR86_RS00405 at 78.693 kb on - strand, within ABZR86_RS00405 at 78.707 kb on + strand, within ABZR86_RS00405 at 78.767 kb on + strand, within ABZR86_RS00405 at 78.888 kb on - strand at 78.976 kb on - strand at 78.976 kb on - strand at 79.373 kb on + strand, within ABZR86_RS00410 at 79.569 kb on + strand at 79.575 kb on + strand at 79.576 kb on - strand at 79.576 kb on - strand at 79.576 kb on - strand at 79.576 kb on - strand at 79.576 kb on - strand at 79.576 kb on - strand at 79.576 kb on - strand at 79.742 kb on + strand, within ABZR86_RS00415 at 79.743 kb on - strand, within ABZR86_RS00415 at 79.787 kb on + strand, within ABZR86_RS00415 at 80.104 kb on + strand, within ABZR86_RS00415 at 80.105 kb on - strand, within ABZR86_RS00415 at 80.203 kb on - strand, within ABZR86_RS00415 at 80.203 kb on - strand, within ABZR86_RS00415 at 80.294 kb on + strand, within ABZR86_RS00415
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 78,088 + ABZR86_RS00400 0.80 +0.1 78,089 - ABZR86_RS00400 0.81 -2.0 78,121 + -2.1 78,122 - +0.2 78,154 + -0.9 78,242 + +1.7 78,371 + ABZR86_RS00405 0.27 +1.1 78,493 - ABZR86_RS00405 0.45 +0.4 78,618 - ABZR86_RS00405 0.63 -1.6 78,630 - ABZR86_RS00405 0.65 -0.0 78,630 - ABZR86_RS00405 0.65 +0.9 78,693 - ABZR86_RS00405 0.74 -1.7 78,707 + ABZR86_RS00405 0.77 +0.4 78,767 + ABZR86_RS00405 0.85 +0.2 78,888 - +1.7 78,976 - -0.1 78,976 - +0.5 79,373 + ABZR86_RS00410 0.79 -0.3 79,569 + +0.3 79,575 + +0.5 79,576 - -1.1 79,576 - +0.9 79,576 - +2.3 79,576 - -1.1 79,576 - +1.2 79,576 - +0.1 79,576 - -0.4 79,742 + ABZR86_RS00415 0.15 -0.3 79,743 - ABZR86_RS00415 0.15 +0.3 79,787 + ABZR86_RS00415 0.19 +0.4 80,104 + ABZR86_RS00415 0.46 -0.1 80,105 - ABZR86_RS00415 0.46 -0.8 80,203 - ABZR86_RS00415 0.54 +0.2 80,203 - ABZR86_RS00415 0.54 +0.2 80,294 + ABZR86_RS00415 0.62 -0.7
Or see this region's nucleotide sequence