Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_003636

Experiment: L-Histidine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Histidine (C)
4,091,036	+		ABIE53_003635	0.31	+0.8
4,091,036	+		ABIE53_003635	0.31	-0.2
4,091,037	-		ABIE53_003635	0.31	+0.8
4,091,155	+		ABIE53_003635	0.41	-1.0
4,091,155	+		ABIE53_003635	0.41	-1.4
4,091,155	+		ABIE53_003635	0.41	-0.0
4,091,155	+		ABIE53_003635	0.41	-0.6
4,091,155	+		ABIE53_003635	0.41	-0.9
4,091,155	+		ABIE53_003635	0.41	+1.0
4,091,156	-		ABIE53_003635	0.41	+0.0
4,091,344	+		ABIE53_003635	0.58	-0.9
4,091,344	+		ABIE53_003635	0.58	-0.3
4,091,345	-		ABIE53_003635	0.58	-0.2
4,091,345	-		ABIE53_003635	0.58	+0.0
4,091,362	+		ABIE53_003635	0.60	-1.8
4,091,362	+		ABIE53_003635	0.60	+0.8
4,091,377	+		ABIE53_003635	0.61	+0.2
4,091,377	+		ABIE53_003635	0.61	+1.7
4,091,378	-		ABIE53_003635	0.61	+0.7
4,091,378	-		ABIE53_003635	0.61	-0.3
4,091,409	+		ABIE53_003635	0.64	-0.9
4,091,409	+		ABIE53_003635	0.64	-1.7
4,091,419	+		ABIE53_003635	0.65	+0.8
4,091,419	+		ABIE53_003635	0.65	+3.6
4,091,419	+		ABIE53_003635	0.65	+3.1
4,091,419	+		ABIE53_003635	0.65	+0.1
4,091,419	+		ABIE53_003635	0.65	-1.7
4,091,420	-		ABIE53_003635	0.65	-0.2
4,091,420	-		ABIE53_003635	0.65	+0.4
4,091,420	-		ABIE53_003635	0.65	+0.5
4,091,420	-		ABIE53_003635	0.65	-0.2
4,091,420	-		ABIE53_003635	0.65	-1.0
4,091,420	-		ABIE53_003635	0.65	-1.8
4,091,420	-		ABIE53_003635	0.65	+1.8
4,091,420	-		ABIE53_003635	0.65	+0.8
4,091,420	-		ABIE53_003635	0.65	-0.2
4,091,422	+		ABIE53_003635	0.65	-2.1
4,091,422	+		ABIE53_003635	0.65	+1.2
4,091,423	-		ABIE53_003635	0.65	+1.9
4,091,482	+		ABIE53_003635	0.70	-1.3
4,091,482	+		ABIE53_003635	0.70	-1.0
4,091,482	+		ABIE53_003635	0.70	+0.1
4,091,482	+		ABIE53_003635	0.70	+0.8
4,091,483	-		ABIE53_003635	0.70	-0.9
4,091,483	-		ABIE53_003635	0.70	-0.3
4,091,663	+		ABIE53_003635	0.86	-0.6
4,091,664	-		ABIE53_003635	0.86	-0.9
4,091,664	-		ABIE53_003635	0.86	+0.0
4,091,760	+				-1.1
4,091,760	+				-1.2
4,091,761	-				+0.3
4,091,761	-				-0.6
4,091,816	+				-0.8
4,091,816	+				-0.6
4,091,816	+				-0.8
4,091,816	+				-0.9
4,091,816	+				-1.2
4,091,817	-				-0.4
4,091,817	-				-0.5
4,091,817	-				-2.1
4,091,817	-				+0.7
4,091,817	-				-0.0
4,091,817	-				-0.1
4,091,817	-				+0.6
4,091,817	-				+0.1
4,091,817	-				-0.4
4,091,817	-				+0.5
4,091,817	-				-0.8
4,091,817	-				+2.4
4,091,817	-				+1.5
4,091,855	+				-1.3
4,091,855	+				-0.2
4,091,855	+				-2.2
4,091,856	-				+1.3
4,091,856	-				-0.2
4,091,856	-				-0.9
4,091,866	+		ABIE53_003636	0.13	-1.4
4,091,867	-		ABIE53_003636	0.14	-1.5
4,091,867	-		ABIE53_003636	0.14	-0.8
4,091,867	-		ABIE53_003636	0.14	+0.1
4,092,061	-				-0.9
4,092,072	+				-1.0
4,092,072	+				-0.4
4,092,072	+				+0.2
4,092,072	+				+2.4
4,092,072	+				-1.3
4,092,072	+				-0.6
4,092,072	+				-0.4
4,092,072	+				-0.7
4,092,072	+				-1.2
4,092,072	+				+0.8
4,092,072	+				-1.0
4,092,072	+				-1.7
4,092,072	+				-1.0
4,092,072	+				-0.8
4,092,072	+				-0.5
4,092,072	+				-0.7
4,092,073	-				-0.6
4,092,073	-				+0.9
4,092,073	-				-0.5
4,092,073	-				+0.4
4,092,073	-				+1.8
4,092,073	-				-2.3
4,092,073	-				-0.1
4,092,073	-				-0.7
4,092,073	-				-0.3
4,092,073	-				+0.8
4,092,073	-				-0.4
4,092,073	-				+0.2
4,092,073	-				-1.1
4,092,073	-				+0.1
4,092,073	-				+0.5
4,092,073	-				+4.5
4,092,073	-				+1.4
4,092,073	-				-0.9
4,092,073	-				-0.3
4,092,073	-				-1.0
4,092,073	-				-1.0
4,092,073	-				-0.8
4,092,073	-				+0.2
4,092,073	-				+0.1
4,092,073	-				+0.4
4,092,074	+				-0.6
4,092,074	+				-2.0
4,092,075	-				+0.7
4,092,075	-				-0.8
4,092,075	-				-0.6
4,092,075	-				-1.0
4,092,075	-				-0.6
4,092,122	+				-1.0
4,092,122	+				-0.2
4,092,122	+				+0.8
4,092,123	-				+1.2
4,092,123	-				-0.6
4,092,123	-				+0.4
4,092,193	+		ABIE53_003637	0.22	+0.1
4,092,193	+		ABIE53_003637	0.22	+0.5
4,092,193	+		ABIE53_003637	0.22	-1.2
4,092,194	-		ABIE53_003637	0.22	+0.4
4,092,194	-		ABIE53_003637	0.22	+0.1
4,092,194	-		ABIE53_003637	0.22	-0.6
4,092,194	-		ABIE53_003637	0.22	+3.4
4,092,242	+		ABIE53_003637	0.35	+1.8
4,092,242	+		ABIE53_003637	0.35	-0.9
4,092,242	+		ABIE53_003637	0.35	+0.2
4,092,242	+		ABIE53_003637	0.35	-0.7
4,092,242	+		ABIE53_003637	0.35	-1.6
4,092,242	+		ABIE53_003637	0.35	-0.5
4,092,243	-		ABIE53_003637	0.35	+0.8
4,092,243	-		ABIE53_003637	0.35	+0.4
4,092,243	-		ABIE53_003637	0.35	+1.8
4,092,243	-		ABIE53_003637	0.35	+0.1
4,092,243	-		ABIE53_003637	0.35	+1.5
4,092,243	-		ABIE53_003637	0.35	+0.8
4,092,243	-		ABIE53_003637	0.35	+0.4
4,092,243	-		ABIE53_003637	0.35	-0.6
4,092,243	-		ABIE53_003637	0.35	-1.2
4,092,243	-		ABIE53_003637	0.35	-1.3
4,092,243	-		ABIE53_003637	0.35	+1.4
4,092,244	+		ABIE53_003637	0.35	+2.4
4,092,245	-		ABIE53_003637	0.36	+1.4
4,092,245	-		ABIE53_003637	0.36	-0.9
4,092,245	-		ABIE53_003637	0.36	+1.2
4,092,245	-		ABIE53_003637	0.36	-2.8
4,092,395	+		ABIE53_003637	0.76	+0.1
4,092,395	+		ABIE53_003637	0.76	+0.4
4,092,395	+		ABIE53_003637	0.76	-0.4
4,092,395	+		ABIE53_003637	0.76	-0.4
4,092,395	+		ABIE53_003637	0.76	-2.6
4,092,395	+		ABIE53_003637	0.76	+0.8
4,092,395	+		ABIE53_003637	0.76	+0.5
4,092,395	+		ABIE53_003637	0.76	-0.5
4,092,395	+		ABIE53_003637	0.76	-0.6
4,092,395	+		ABIE53_003637	0.76	-1.9
4,092,395	+		ABIE53_003637	0.76	-1.8
4,092,395	+		ABIE53_003637	0.76	-1.2
4,092,395	+		ABIE53_003637	0.76	-1.0
4,092,396	-		ABIE53_003637	0.76	-0.8
4,092,396	-		ABIE53_003637	0.76	+4.1
4,092,396	-		ABIE53_003637	0.76	+0.5
4,092,396	-		ABIE53_003637	0.76	-0.0
4,092,396	-		ABIE53_003637	0.76	-0.2
4,092,396	-		ABIE53_003637	0.76	+2.4
4,092,396	-		ABIE53_003637	0.76	+0.1
4,092,396	-		ABIE53_003637	0.76	+2.4
4,092,397	+		ABIE53_003637	0.76	-0.1
4,092,397	+		ABIE53_003637	0.76	-0.0
4,092,397	+		ABIE53_003637	0.76	+0.4
4,092,397	+		ABIE53_003637	0.76	-1.0
4,092,397	+		ABIE53_003637	0.76	+2.4
4,092,398	-		ABIE53_003637	0.77	+0.8
4,092,475	+				-2.6
4,092,475	+				-1.9
4,092,475	+				+0.8
4,092,476	-				+0.1
4,092,621	+				+2.4
4,092,621	+				-1.4
4,092,621	+				+1.0
4,092,621	+				+0.9
4,092,621	+				-0.3
4,092,621	+				-0.6
4,092,621	+				-0.2
4,092,621	+				-1.0
4,092,621	+				+1.0
4,092,621	+				-1.8
4,092,621	+				-0.0
4,092,621	+				+0.2
4,092,621	+				-1.9
4,092,621	+				-0.8
4,092,621	+				-0.8
4,092,622	-				+0.2
4,092,622	-				+1.1
4,092,622	-				+0.2
4,092,622	-				+0.4
4,092,622	-				+4.0
4,092,622	-				+0.8
4,092,622	-				-1.4
4,092,622	-				-0.3
4,092,622	-				+0.8
4,092,622	-				+0.2
4,092,622	-				-1.2
4,092,622	-				-0.1
4,092,622	-				+0.8
4,092,622	-				+4.2
4,092,622	-				+0.5
4,092,643	-				-1.2
4,092,643	-				-0.0
4,092,643	-				-0.4
4,092,643	-				+1.4
4,092,643	-				+3.4
4,092,801	+				-2.9
4,092,802	-				+0.0
4,092,961	+		ABIE53_003638	0.22	-0.4
4,092,961	+		ABIE53_003638	0.22	+0.1
4,092,962	-		ABIE53_003638	0.22	+1.8
4,092,962	-		ABIE53_003638	0.22	-0.2