Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4190 and Ac3H11_4191 are separated by 57 nucleotides Ac3H11_4191 and Ac3H11_4192 are separated by 282 nucleotides Ac3H11_4192 and Ac3H11_4193 are separated by 682 nucleotides
Ac3H11_4190 - Similar to ribosomal large subunit pseudouridine synthase A, at 448,514 to 449,431
_4190
Ac3H11_4191 - Alkaline phosphatase (EC 3.1.3.1), at 449,489 to 449,650
_4191
Ac3H11_4192 - hypothetical protein, at 449,933 to 450,337
_4192
Ac3H11_4193 - DNA polymerase III alpha subunit (EC 2.7.7.7), at 451,020 to 454,256
_4193
Position (kb) 449
450
451 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 448.947 kb on + strand, within Ac3H11_4190 at 448.947 kb on + strand, within Ac3H11_4190 at 448.947 kb on + strand, within Ac3H11_4190 at 448.947 kb on + strand, within Ac3H11_4190 at 448.948 kb on - strand, within Ac3H11_4190 at 449.146 kb on - strand, within Ac3H11_4190 at 449.196 kb on + strand, within Ac3H11_4190 at 449.196 kb on + strand, within Ac3H11_4190 at 449.197 kb on - strand, within Ac3H11_4190 at 449.199 kb on + strand, within Ac3H11_4190 at 449.199 kb on + strand, within Ac3H11_4190 at 449.199 kb on + strand, within Ac3H11_4190 at 449.199 kb on + strand, within Ac3H11_4190 at 449.199 kb on + strand, within Ac3H11_4190 at 449.199 kb on + strand, within Ac3H11_4190 at 449.199 kb on + strand, within Ac3H11_4190 at 449.200 kb on - strand, within Ac3H11_4190 at 449.200 kb on - strand, within Ac3H11_4190 at 449.200 kb on - strand, within Ac3H11_4190 at 449.200 kb on - strand, within Ac3H11_4190 at 449.200 kb on - strand, within Ac3H11_4190 at 449.200 kb on - strand, within Ac3H11_4190 at 449.200 kb on - strand, within Ac3H11_4190 at 449.202 kb on + strand, within Ac3H11_4190 at 449.202 kb on + strand, within Ac3H11_4190 at 449.202 kb on + strand, within Ac3H11_4190 at 449.202 kb on + strand, within Ac3H11_4190 at 449.202 kb on + strand, within Ac3H11_4190 at 449.203 kb on - strand, within Ac3H11_4190 at 449.203 kb on - strand, within Ac3H11_4190 at 449.203 kb on - strand, within Ac3H11_4190 at 449.203 kb on - strand, within Ac3H11_4190 at 449.203 kb on - strand, within Ac3H11_4190 at 449.446 kb on - strand at 449.472 kb on + strand at 449.473 kb on - strand at 449.473 kb on - strand at 449.473 kb on - strand at 449.491 kb on - strand at 449.491 kb on - strand at 449.491 kb on - strand at 449.670 kb on + strand at 449.670 kb on + strand at 449.671 kb on - strand at 449.671 kb on - strand at 449.671 kb on - strand at 449.671 kb on - strand at 449.726 kb on - strand at 449.726 kb on - strand at 449.831 kb on - strand at 449.874 kb on + strand at 449.874 kb on + strand at 449.874 kb on + strand at 449.874 kb on + strand at 449.874 kb on + strand at 449.874 kb on + strand at 449.874 kb on + strand at 449.874 kb on + strand at 449.874 kb on + strand at 449.874 kb on + strand at 449.874 kb on + strand at 449.874 kb on + strand at 449.874 kb on + strand at 449.874 kb on + strand at 449.874 kb on + strand at 449.874 kb on + strand at 449.874 kb on + strand at 449.875 kb on - strand at 449.875 kb on - strand at 449.875 kb on - strand at 449.875 kb on - strand at 449.875 kb on - strand at 449.875 kb on - strand at 449.875 kb on - strand at 449.875 kb on - strand at 449.875 kb on - strand at 449.916 kb on + strand at 449.918 kb on + strand at 449.919 kb on - strand at 449.919 kb on - strand at 449.919 kb on - strand at 449.934 kb on + strand at 449.935 kb on - strand at 449.935 kb on - strand at 450.103 kb on + strand, within Ac3H11_4192 at 450.103 kb on + strand, within Ac3H11_4192 at 450.103 kb on + strand, within Ac3H11_4192 at 450.103 kb on + strand, within Ac3H11_4192 at 450.103 kb on + strand, within Ac3H11_4192 at 450.103 kb on + strand, within Ac3H11_4192 at 450.103 kb on + strand, within Ac3H11_4192 at 450.104 kb on - strand, within Ac3H11_4192 at 450.104 kb on - strand, within Ac3H11_4192 at 450.104 kb on - strand, within Ac3H11_4192 at 450.104 kb on - strand, within Ac3H11_4192 at 450.104 kb on - strand, within Ac3H11_4192 at 450.244 kb on + strand, within Ac3H11_4192 at 450.339 kb on + strand at 450.339 kb on + strand at 450.339 kb on + strand at 450.339 kb on + strand at 450.339 kb on + strand at 450.339 kb on + strand at 450.340 kb on - strand at 450.340 kb on - strand at 450.340 kb on - strand at 450.340 kb on - strand at 450.340 kb on - strand at 450.340 kb on - strand at 450.361 kb on - strand at 450.441 kb on + strand at 450.441 kb on + strand at 450.442 kb on - strand at 450.442 kb on - strand at 450.455 kb on + strand at 450.455 kb on + strand at 450.455 kb on + strand at 450.455 kb on + strand at 450.456 kb on - strand at 450.456 kb on - strand at 450.456 kb on - strand at 450.456 kb on - strand at 450.456 kb on - strand at 450.456 kb on - strand at 450.457 kb on + strand at 450.457 kb on + strand at 450.457 kb on + strand at 450.457 kb on + strand at 450.457 kb on + strand at 450.457 kb on + strand at 450.457 kb on + strand at 450.458 kb on - strand at 450.458 kb on - strand at 450.458 kb on - strand at 450.458 kb on - strand at 450.458 kb on - strand at 450.458 kb on - strand at 450.458 kb on - strand at 450.458 kb on - strand at 450.458 kb on - strand at 450.504 kb on + strand at 450.504 kb on + strand at 450.513 kb on + strand at 450.514 kb on - strand at 450.514 kb on - strand at 450.566 kb on - strand at 450.566 kb on - strand at 450.566 kb on - strand at 450.566 kb on - strand at 450.566 kb on - strand at 450.651 kb on + strand at 450.651 kb on + strand at 450.651 kb on + strand at 450.652 kb on - strand at 450.652 kb on - strand at 450.652 kb on - strand at 450.710 kb on + strand at 450.710 kb on + strand at 450.710 kb on + strand at 450.711 kb on - strand at 450.840 kb on + strand at 450.840 kb on + strand at 450.841 kb on - strand at 450.851 kb on + strand at 450.851 kb on + strand at 450.852 kb on - strand at 450.894 kb on + strand at 450.895 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 448,947 + Ac3H11_4190 0.47 +0.1 448,947 + Ac3H11_4190 0.47 -0.1 448,947 + Ac3H11_4190 0.47 -0.7 448,947 + Ac3H11_4190 0.47 +0.3 448,948 - Ac3H11_4190 0.47 -0.1 449,146 - Ac3H11_4190 0.69 -1.0 449,196 + Ac3H11_4190 0.74 -0.8 449,196 + Ac3H11_4190 0.74 +0.6 449,197 - Ac3H11_4190 0.74 -0.9 449,199 + Ac3H11_4190 0.75 +0.9 449,199 + Ac3H11_4190 0.75 +0.4 449,199 + Ac3H11_4190 0.75 -0.5 449,199 + Ac3H11_4190 0.75 +0.7 449,199 + Ac3H11_4190 0.75 +2.5 449,199 + Ac3H11_4190 0.75 +1.5 449,199 + Ac3H11_4190 0.75 +0.7 449,200 - Ac3H11_4190 0.75 +2.5 449,200 - Ac3H11_4190 0.75 +0.1 449,200 - Ac3H11_4190 0.75 +0.1 449,200 - Ac3H11_4190 0.75 -1.5 449,200 - Ac3H11_4190 0.75 -0.4 449,200 - Ac3H11_4190 0.75 +0.6 449,200 - Ac3H11_4190 0.75 -1.6 449,202 + Ac3H11_4190 0.75 +0.3 449,202 + Ac3H11_4190 0.75 +0.2 449,202 + Ac3H11_4190 0.75 +1.7 449,202 + Ac3H11_4190 0.75 -0.1 449,202 + Ac3H11_4190 0.75 +1.2 449,203 - Ac3H11_4190 0.75 +0.7 449,203 - Ac3H11_4190 0.75 +0.4 449,203 - Ac3H11_4190 0.75 -0.8 449,203 - Ac3H11_4190 0.75 +1.2 449,203 - Ac3H11_4190 0.75 +0.7 449,446 - -0.1 449,472 + +1.3 449,473 - -1.1 449,473 - -0.1 449,473 - +0.3 449,491 - +0.1 449,491 - +0.8 449,491 - +0.0 449,670 + +0.3 449,670 + +0.1 449,671 - +0.1 449,671 - +0.5 449,671 - -1.4 449,671 - +0.8 449,726 - +0.7 449,726 - -0.1 449,831 - +0.5 449,874 + -1.6 449,874 + -0.2 449,874 + -0.0 449,874 + +0.5 449,874 + +1.5 449,874 + -3.1 449,874 + +0.1 449,874 + -0.2 449,874 + -0.1 449,874 + +0.7 449,874 + -0.7 449,874 + +0.2 449,874 + +0.6 449,874 + -0.8 449,874 + +0.1 449,874 + +1.3 449,874 + -0.3 449,875 - +0.2 449,875 - +0.5 449,875 - +0.7 449,875 - -0.4 449,875 - -0.2 449,875 - +0.4 449,875 - -1.5 449,875 - -1.4 449,875 - +0.9 449,916 + -0.5 449,918 + -0.9 449,919 - +1.0 449,919 - +1.4 449,919 - -1.0 449,934 + +0.1 449,935 - +0.5 449,935 - +1.3 450,103 + Ac3H11_4192 0.42 +0.4 450,103 + Ac3H11_4192 0.42 -0.2 450,103 + Ac3H11_4192 0.42 +0.1 450,103 + Ac3H11_4192 0.42 +0.1 450,103 + Ac3H11_4192 0.42 +0.7 450,103 + Ac3H11_4192 0.42 -0.5 450,103 + Ac3H11_4192 0.42 +0.7 450,104 - Ac3H11_4192 0.42 -0.1 450,104 - Ac3H11_4192 0.42 -0.3 450,104 - Ac3H11_4192 0.42 -0.8 450,104 - Ac3H11_4192 0.42 +0.4 450,104 - Ac3H11_4192 0.42 -0.0 450,244 + Ac3H11_4192 0.77 +0.6 450,339 + +0.7 450,339 + -0.1 450,339 + +1.4 450,339 + +1.2 450,339 + +0.7 450,339 + +1.1 450,340 - +1.6 450,340 - +0.6 450,340 - +0.0 450,340 - +0.4 450,340 - -0.2 450,340 - -0.3 450,361 - -1.0 450,441 + -0.7 450,441 + +1.1 450,442 - -0.0 450,442 - +1.1 450,455 + +0.4 450,455 + +0.6 450,455 + +0.0 450,455 + +0.7 450,456 - -0.0 450,456 - +0.2 450,456 - +0.8 450,456 - +0.6 450,456 - -0.7 450,456 - -0.3 450,457 + -0.0 450,457 + -0.9 450,457 + -0.1 450,457 + +1.4 450,457 + -0.2 450,457 + -0.3 450,457 + +1.4 450,458 - +1.6 450,458 - +0.5 450,458 - +0.3 450,458 - +1.0 450,458 - -0.3 450,458 - +0.2 450,458 - +0.9 450,458 - +1.0 450,458 - -0.0 450,504 + -0.4 450,504 + +0.9 450,513 + +1.0 450,514 - -0.0 450,514 - -1.0 450,566 - +0.3 450,566 - +1.0 450,566 - -1.1 450,566 - +1.3 450,566 - +0.9 450,651 + +0.1 450,651 + +0.8 450,651 + +0.1 450,652 - +0.1 450,652 - +0.5 450,652 - -1.2 450,710 + +0.6 450,710 + -0.3 450,710 + +0.3 450,711 - -0.5 450,840 + +0.1 450,840 + +1.0 450,841 - +0.6 450,851 + +0.3 450,851 + +0.3 450,852 - -1.2 450,894 + -0.8 450,895 - +1.0
Or see this region's nucleotide sequence