Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3937 and Ac3H11_3938 are separated by 68 nucleotides Ac3H11_3938 and Ac3H11_3939 are separated by 103 nucleotides Ac3H11_3939 and Ac3H11_3940 are separated by 233 nucleotides Ac3H11_3940 and Ac3H11_3941 overlap by 4 nucleotides
Ac3H11_3937 - hypothetical protein, at 155,478 to 155,918
_3937
Ac3H11_3938 - hypothetical protein, at 155,987 to 156,631
_3938
Ac3H11_3939 - Inner membrane protein YqiK, at 156,735 to 158,861
_3939
Ac3H11_3940 - hypothetical protein, at 159,095 to 159,268
_3940
Ac3H11_3941 - FIG01123212: hypothetical protein, at 159,265 to 164,895
_3941
Position (kb) 156
157
158
159 Strain fitness (log2 ratio) -1
0
1
2
3 at 155.964 kb on + strand at 155.964 kb on + strand at 155.964 kb on + strand at 155.964 kb on + strand at 155.965 kb on - strand at 155.965 kb on - strand at 155.965 kb on - strand at 155.965 kb on - strand at 155.965 kb on - strand at 155.965 kb on - strand at 155.965 kb on - strand at 156.035 kb on + strand at 156.035 kb on + strand at 156.035 kb on + strand at 156.036 kb on - strand at 156.065 kb on + strand, within Ac3H11_3938 at 156.065 kb on + strand, within Ac3H11_3938 at 156.065 kb on + strand, within Ac3H11_3938 at 156.066 kb on - strand, within Ac3H11_3938 at 156.176 kb on + strand, within Ac3H11_3938 at 156.176 kb on + strand, within Ac3H11_3938 at 156.177 kb on - strand, within Ac3H11_3938 at 156.177 kb on - strand, within Ac3H11_3938 at 156.177 kb on - strand, within Ac3H11_3938 at 156.582 kb on - strand at 156.602 kb on + strand at 156.603 kb on - strand at 156.906 kb on + strand at 156.906 kb on + strand at 156.907 kb on - strand at 156.907 kb on - strand at 157.188 kb on + strand, within Ac3H11_3939 at 157.251 kb on + strand, within Ac3H11_3939 at 157.252 kb on - strand, within Ac3H11_3939 at 157.252 kb on - strand, within Ac3H11_3939 at 157.278 kb on + strand, within Ac3H11_3939 at 157.337 kb on + strand, within Ac3H11_3939 at 157.337 kb on + strand, within Ac3H11_3939 at 158.860 kb on - strand at 158.940 kb on + strand at 159.110 kb on + strand at 159.270 kb on + strand at 159.271 kb on - strand at 159.271 kb on - strand at 159.271 kb on - strand at 159.279 kb on + strand at 159.279 kb on + strand at 159.280 kb on - strand at 159.343 kb on + strand at 159.509 kb on - strand at 159.509 kb on - strand at 159.595 kb on + strand at 159.595 kb on + strand at 159.724 kb on + strand at 159.724 kb on + strand at 159.724 kb on + strand at 159.724 kb on + strand at 159.724 kb on + strand at 159.724 kb on + strand at 159.725 kb on - strand at 159.725 kb on - strand at 159.725 kb on - strand at 159.730 kb on + strand at 159.730 kb on + strand at 159.731 kb on - strand at 159.731 kb on - strand at 159.731 kb on - strand at 159.731 kb on - strand at 159.733 kb on + strand at 159.734 kb on - strand at 159.734 kb on - strand at 159.734 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 155,964 + +0.7 155,964 + -0.9 155,964 + -0.5 155,964 + -0.7 155,965 - +1.0 155,965 - -0.7 155,965 - +1.6 155,965 - +0.6 155,965 - +0.4 155,965 - +0.4 155,965 - -0.1 156,035 + -0.3 156,035 + +1.4 156,035 + -1.0 156,036 - +0.3 156,065 + Ac3H11_3938 0.12 +0.6 156,065 + Ac3H11_3938 0.12 +0.5 156,065 + Ac3H11_3938 0.12 +1.2 156,066 - Ac3H11_3938 0.12 +1.0 156,176 + Ac3H11_3938 0.29 +0.7 156,176 + Ac3H11_3938 0.29 -0.0 156,177 - Ac3H11_3938 0.29 +1.0 156,177 - Ac3H11_3938 0.29 -0.3 156,177 - Ac3H11_3938 0.29 +0.7 156,582 - +0.2 156,602 + -0.5 156,603 - +0.3 156,906 + +2.5 156,906 + +0.1 156,907 - -1.0 156,907 - -0.4 157,188 + Ac3H11_3939 0.21 +1.1 157,251 + Ac3H11_3939 0.24 +0.2 157,252 - Ac3H11_3939 0.24 -0.3 157,252 - Ac3H11_3939 0.24 -0.3 157,278 + Ac3H11_3939 0.26 -1.0 157,337 + Ac3H11_3939 0.28 +1.6 157,337 + Ac3H11_3939 0.28 -0.3 158,860 - +0.1 158,940 + -0.6 159,110 + +0.1 159,270 + -0.2 159,271 - +0.1 159,271 - +3.2 159,271 - -1.6 159,279 + +0.5 159,279 + +0.1 159,280 - -0.1 159,343 + +0.6 159,509 - -0.9 159,509 - +0.2 159,595 + +0.2 159,595 + +0.6 159,724 + +0.7 159,724 + +0.1 159,724 + +0.5 159,724 + +0.1 159,724 + +0.4 159,724 + +0.6 159,725 - -0.6 159,725 - -1.0 159,725 - -0.1 159,730 + -0.8 159,730 + -1.0 159,731 - -1.1 159,731 - -0.1 159,731 - -0.6 159,731 - -1.6 159,733 + +0.7 159,734 - -0.6 159,734 - +0.6 159,734 - +0.0
Or see this region's nucleotide sequence