Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2252 and Ac3H11_2253 are separated by 73 nucleotides Ac3H11_2253 and Ac3H11_2254 overlap by 11 nucleotides Ac3H11_2254 and Ac3H11_2255 are separated by 41 nucleotides Ac3H11_2255 and Ac3H11_2256 overlap by 4 nucleotides
Ac3H11_2252 - uncharacterized domain 1, at 487,143 to 487,694
_2252
Ac3H11_2253 - Transcriptional regulator, MarR family, at 487,768 to 488,268
_2253
Ac3H11_2254 - Transmembrane transport protein, at 488,258 to 489,520
_2254
Ac3H11_2255 - Acyl dehydratase, at 489,562 to 490,089
_2255
Ac3H11_2256 - Na+ driven multidrug efflux pump, at 490,086 to 491,507
_2256
Position (kb) 488
489
490 Strain fitness (log2 ratio) -1
0
1
2 at 487.345 kb on + strand, within Ac3H11_2252 at 487.346 kb on - strand, within Ac3H11_2252 at 487.534 kb on + strand, within Ac3H11_2252 at 487.535 kb on - strand, within Ac3H11_2252 at 487.779 kb on + strand at 487.882 kb on + strand, within Ac3H11_2253 at 487.883 kb on - strand, within Ac3H11_2253 at 487.924 kb on + strand, within Ac3H11_2253 at 487.925 kb on - strand, within Ac3H11_2253 at 487.925 kb on - strand, within Ac3H11_2253 at 488.570 kb on + strand, within Ac3H11_2254 at 488.570 kb on + strand, within Ac3H11_2254 at 488.570 kb on + strand, within Ac3H11_2254 at 488.570 kb on + strand, within Ac3H11_2254 at 488.570 kb on + strand, within Ac3H11_2254 at 488.571 kb on - strand, within Ac3H11_2254 at 488.571 kb on - strand, within Ac3H11_2254 at 488.571 kb on - strand, within Ac3H11_2254 at 488.571 kb on - strand, within Ac3H11_2254 at 488.571 kb on - strand, within Ac3H11_2254 at 488.571 kb on - strand, within Ac3H11_2254 at 488.571 kb on - strand, within Ac3H11_2254 at 488.571 kb on - strand, within Ac3H11_2254 at 488.951 kb on + strand, within Ac3H11_2254 at 488.958 kb on - strand, within Ac3H11_2254 at 488.958 kb on - strand, within Ac3H11_2254 at 488.958 kb on - strand, within Ac3H11_2254 at 488.958 kb on - strand, within Ac3H11_2254 at 489.136 kb on + strand, within Ac3H11_2254 at 489.137 kb on - strand, within Ac3H11_2254 at 489.137 kb on - strand, within Ac3H11_2254 at 489.137 kb on - strand, within Ac3H11_2254 at 489.161 kb on + strand, within Ac3H11_2254 at 489.161 kb on + strand, within Ac3H11_2254 at 489.162 kb on - strand, within Ac3H11_2254 at 489.162 kb on - strand, within Ac3H11_2254 at 489.374 kb on + strand, within Ac3H11_2254 at 489.374 kb on + strand, within Ac3H11_2254 at 489.375 kb on - strand, within Ac3H11_2254 at 489.375 kb on - strand, within Ac3H11_2254 at 489.375 kb on - strand, within Ac3H11_2254 at 489.410 kb on + strand at 489.410 kb on + strand at 489.410 kb on + strand at 489.411 kb on - strand at 489.411 kb on - strand at 489.425 kb on + strand at 489.426 kb on - strand at 489.616 kb on + strand, within Ac3H11_2255 at 489.616 kb on + strand, within Ac3H11_2255 at 489.616 kb on + strand, within Ac3H11_2255 at 489.617 kb on - strand, within Ac3H11_2255 at 489.617 kb on - strand, within Ac3H11_2255 at 489.617 kb on - strand, within Ac3H11_2255 at 489.617 kb on - strand, within Ac3H11_2255 at 489.617 kb on - strand, within Ac3H11_2255 at 490.230 kb on + strand, within Ac3H11_2256 at 490.230 kb on + strand, within Ac3H11_2256 at 490.230 kb on + strand, within Ac3H11_2256 at 490.474 kb on - strand, within Ac3H11_2256 at 490.474 kb on - strand, within Ac3H11_2256 at 490.474 kb on - strand, within Ac3H11_2256 at 490.474 kb on - strand, within Ac3H11_2256 at 490.474 kb on - strand, within Ac3H11_2256
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 487,345 + Ac3H11_2252 0.37 -0.9 487,346 - Ac3H11_2252 0.37 -0.5 487,534 + Ac3H11_2252 0.71 +0.8 487,535 - Ac3H11_2252 0.71 +0.3 487,779 + +0.2 487,882 + Ac3H11_2253 0.23 -0.2 487,883 - Ac3H11_2253 0.23 +0.0 487,924 + Ac3H11_2253 0.31 -1.3 487,925 - Ac3H11_2253 0.31 -1.2 487,925 - Ac3H11_2253 0.31 -0.7 488,570 + Ac3H11_2254 0.25 -0.8 488,570 + Ac3H11_2254 0.25 -1.3 488,570 + Ac3H11_2254 0.25 -0.4 488,570 + Ac3H11_2254 0.25 +0.2 488,570 + Ac3H11_2254 0.25 -0.7 488,571 - Ac3H11_2254 0.25 +0.2 488,571 - Ac3H11_2254 0.25 -0.4 488,571 - Ac3H11_2254 0.25 +0.3 488,571 - Ac3H11_2254 0.25 +0.2 488,571 - Ac3H11_2254 0.25 +0.1 488,571 - Ac3H11_2254 0.25 +0.2 488,571 - Ac3H11_2254 0.25 -0.3 488,571 - Ac3H11_2254 0.25 +0.4 488,951 + Ac3H11_2254 0.55 +1.2 488,958 - Ac3H11_2254 0.55 +0.6 488,958 - Ac3H11_2254 0.55 -0.4 488,958 - Ac3H11_2254 0.55 +0.4 488,958 - Ac3H11_2254 0.55 -0.1 489,136 + Ac3H11_2254 0.70 +0.7 489,137 - Ac3H11_2254 0.70 +0.2 489,137 - Ac3H11_2254 0.70 -0.1 489,137 - Ac3H11_2254 0.70 -1.0 489,161 + Ac3H11_2254 0.71 -0.9 489,161 + Ac3H11_2254 0.71 -0.6 489,162 - Ac3H11_2254 0.72 -0.2 489,162 - Ac3H11_2254 0.72 +0.9 489,374 + Ac3H11_2254 0.88 +0.4 489,374 + Ac3H11_2254 0.88 +0.6 489,375 - Ac3H11_2254 0.88 +0.0 489,375 - Ac3H11_2254 0.88 -0.0 489,375 - Ac3H11_2254 0.88 +0.6 489,410 + +0.1 489,410 + +1.0 489,410 + +0.4 489,411 - +0.5 489,411 - +2.0 489,425 + -0.1 489,426 - +0.5 489,616 + Ac3H11_2255 0.10 +0.6 489,616 + Ac3H11_2255 0.10 +0.0 489,616 + Ac3H11_2255 0.10 +0.1 489,617 - Ac3H11_2255 0.10 -0.4 489,617 - Ac3H11_2255 0.10 +1.2 489,617 - Ac3H11_2255 0.10 +0.4 489,617 - Ac3H11_2255 0.10 +0.1 489,617 - Ac3H11_2255 0.10 +0.9 490,230 + Ac3H11_2256 0.10 -0.2 490,230 + Ac3H11_2256 0.10 +0.6 490,230 + Ac3H11_2256 0.10 -0.1 490,474 - Ac3H11_2256 0.27 -0.4 490,474 - Ac3H11_2256 0.27 -0.1 490,474 - Ac3H11_2256 0.27 -0.3 490,474 - Ac3H11_2256 0.27 -0.2 490,474 - Ac3H11_2256 0.27 +0.4
Or see this region's nucleotide sequence