Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS21395 and ABZR86_RS21400 are separated by 442 nucleotides ABZR86_RS21400 and ABZR86_RS21405 are separated by 52 nucleotides ABZR86_RS21405 and ABZR86_RS21410 overlap by 4 nucleotides
ABZR86_RS21395: ABZR86_RS21395 - TraB/GumN family protein, at 244,220 to 245,089
_RS21395
ABZR86_RS21400: ABZR86_RS21400 - DNA topoisomerase IV subunit A, at 245,532 to 247,772
_RS21400
ABZR86_RS21405: ABZR86_RS21405 - biotin--protein ligase, at 247,825 to 248,115
_RS21405
ABZR86_RS21410: ABZR86_RS21410 - biotin/lipoate A/B protein ligase family protein, at 248,112 to 248,888
_RS21410
Position (kb) 245
246
247
248 Strain fitness (log2 ratio) -1
0
1 at 244.576 kb on - strand, within ABZR86_RS21395 at 245.136 kb on + strand at 245.136 kb on + strand at 245.136 kb on + strand at 245.137 kb on - strand at 245.266 kb on - strand at 245.275 kb on - strand at 247.837 kb on + strand at 247.837 kb on + strand at 247.978 kb on + strand, within ABZR86_RS21405 at 247.978 kb on + strand, within ABZR86_RS21405 at 247.979 kb on - strand, within ABZR86_RS21405 at 248.047 kb on + strand, within ABZR86_RS21405 at 248.047 kb on + strand, within ABZR86_RS21405 at 248.047 kb on + strand, within ABZR86_RS21405 at 248.047 kb on + strand, within ABZR86_RS21405 at 248.047 kb on + strand, within ABZR86_RS21405 at 248.048 kb on - strand, within ABZR86_RS21405 at 248.403 kb on + strand, within ABZR86_RS21410 at 248.404 kb on - strand, within ABZR86_RS21410 at 248.412 kb on + strand, within ABZR86_RS21410 at 248.412 kb on + strand, within ABZR86_RS21410 at 248.413 kb on - strand, within ABZR86_RS21410 at 248.413 kb on - strand, within ABZR86_RS21410 at 248.413 kb on - strand, within ABZR86_RS21410 at 248.458 kb on - strand, within ABZR86_RS21410 at 248.458 kb on - strand, within ABZR86_RS21410 at 248.517 kb on + strand, within ABZR86_RS21410 at 248.575 kb on + strand, within ABZR86_RS21410 at 248.575 kb on + strand, within ABZR86_RS21410 at 248.575 kb on + strand, within ABZR86_RS21410 at 248.576 kb on - strand, within ABZR86_RS21410 at 248.617 kb on - strand, within ABZR86_RS21410 at 248.617 kb on - strand, within ABZR86_RS21410
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 244,576 - ABZR86_RS21395 0.41 -1.0 245,136 + +0.0 245,136 + +0.3 245,136 + -0.3 245,137 - +0.3 245,266 - +0.4 245,275 - -0.1 247,837 + -0.9 247,837 + +1.0 247,978 + ABZR86_RS21405 0.53 -1.1 247,978 + ABZR86_RS21405 0.53 +0.3 247,979 - ABZR86_RS21405 0.53 +0.6 248,047 + ABZR86_RS21405 0.76 +0.0 248,047 + ABZR86_RS21405 0.76 -0.7 248,047 + ABZR86_RS21405 0.76 -0.2 248,047 + ABZR86_RS21405 0.76 +0.1 248,047 + ABZR86_RS21405 0.76 -0.6 248,048 - ABZR86_RS21405 0.77 -0.4 248,403 + ABZR86_RS21410 0.37 -0.1 248,404 - ABZR86_RS21410 0.38 +0.2 248,412 + ABZR86_RS21410 0.39 +0.0 248,412 + ABZR86_RS21410 0.39 -0.3 248,413 - ABZR86_RS21410 0.39 +0.9 248,413 - ABZR86_RS21410 0.39 -1.0 248,413 - ABZR86_RS21410 0.39 -0.1 248,458 - ABZR86_RS21410 0.45 -0.3 248,458 - ABZR86_RS21410 0.45 -0.3 248,517 + ABZR86_RS21410 0.52 -0.3 248,575 + ABZR86_RS21410 0.60 -0.5 248,575 + ABZR86_RS21410 0.60 +0.2 248,575 + ABZR86_RS21410 0.60 -0.4 248,576 - ABZR86_RS21410 0.60 -0.0 248,617 - ABZR86_RS21410 0.65 +0.7 248,617 - ABZR86_RS21410 0.65 -0.1
Or see this region's nucleotide sequence