Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS16565 and ABZR86_RS16570 are separated by 164 nucleotides ABZR86_RS16570 and ABZR86_RS16575 are separated by 5 nucleotides ABZR86_RS16575 and ABZR86_RS16580 are separated by 58 nucleotides ABZR86_RS16580 and ABZR86_RS16585 are separated by 18 nucleotides
ABZR86_RS16565: ABZR86_RS16565 - type II toxin-antitoxin system HicB family antitoxin, at 3,741,061 to 3,741,318
_RS16565
ABZR86_RS16570: ABZR86_RS16570 - glutathione S-transferase family protein, at 3,741,483 to 3,742,169
_RS16570
ABZR86_RS16575: ABZR86_RS16575 - hypothetical protein, at 3,742,175 to 3,742,717
_RS16575
ABZR86_RS16580: ABZR86_RS16580 - Pr6Pr family membrane protein, at 3,742,776 to 3,743,435
_RS16580
ABZR86_RS16585: ABZR86_RS16585 - TMEM175 family protein, at 3,743,454 to 3,744,095
_RS16585
Position (kb)
3742
3743 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3741.270 kb on + strand, within ABZR86_RS16565 at 3741.270 kb on + strand, within ABZR86_RS16565 at 3741.270 kb on + strand, within ABZR86_RS16565 at 3741.271 kb on - strand, within ABZR86_RS16565 at 3741.271 kb on - strand, within ABZR86_RS16565 at 3741.278 kb on + strand, within ABZR86_RS16565 at 3741.278 kb on + strand, within ABZR86_RS16565 at 3741.279 kb on - strand, within ABZR86_RS16565 at 3741.279 kb on - strand, within ABZR86_RS16565 at 3741.353 kb on + strand at 3741.353 kb on + strand at 3741.353 kb on + strand at 3741.354 kb on - strand at 3741.354 kb on - strand at 3741.354 kb on - strand at 3741.410 kb on + strand at 3741.486 kb on + strand at 3741.486 kb on + strand at 3741.486 kb on + strand at 3741.486 kb on + strand at 3741.487 kb on - strand at 3741.487 kb on - strand at 3741.487 kb on - strand at 3741.496 kb on - strand at 3741.513 kb on + strand at 3741.514 kb on - strand at 3741.514 kb on - strand at 3741.602 kb on + strand, within ABZR86_RS16570 at 3741.602 kb on + strand, within ABZR86_RS16570 at 3741.603 kb on - strand, within ABZR86_RS16570 at 3741.603 kb on - strand, within ABZR86_RS16570 at 3741.603 kb on - strand, within ABZR86_RS16570 at 3741.603 kb on - strand, within ABZR86_RS16570 at 3741.603 kb on - strand, within ABZR86_RS16570 at 3741.699 kb on + strand, within ABZR86_RS16570 at 3741.700 kb on - strand, within ABZR86_RS16570 at 3741.966 kb on + strand, within ABZR86_RS16570 at 3741.982 kb on - strand, within ABZR86_RS16570 at 3741.996 kb on + strand, within ABZR86_RS16570 at 3741.996 kb on + strand, within ABZR86_RS16570 at 3741.997 kb on - strand, within ABZR86_RS16570 at 3741.997 kb on - strand, within ABZR86_RS16570 at 3741.997 kb on - strand, within ABZR86_RS16570 at 3742.071 kb on + strand, within ABZR86_RS16570 at 3742.071 kb on + strand, within ABZR86_RS16570 at 3742.177 kb on - strand at 3742.288 kb on - strand, within ABZR86_RS16575 at 3742.352 kb on - strand, within ABZR86_RS16575 at 3742.711 kb on + strand at 3742.712 kb on - strand at 3742.936 kb on + strand, within ABZR86_RS16580 at 3742.937 kb on - strand, within ABZR86_RS16580 at 3742.969 kb on + strand, within ABZR86_RS16580 at 3742.978 kb on + strand, within ABZR86_RS16580 at 3742.979 kb on - strand, within ABZR86_RS16580 at 3743.054 kb on - strand, within ABZR86_RS16580 at 3743.273 kb on + strand, within ABZR86_RS16580 at 3743.274 kb on - strand, within ABZR86_RS16580 at 3743.290 kb on + strand, within ABZR86_RS16580 at 3743.312 kb on + strand, within ABZR86_RS16580 at 3743.313 kb on - strand, within ABZR86_RS16580 at 3743.509 kb on + strand at 3743.510 kb on - strand at 3743.510 kb on - strand at 3743.666 kb on - strand, within ABZR86_RS16585
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 3,741,270 + ABZR86_RS16565 0.81 -0.1 3,741,270 + ABZR86_RS16565 0.81 -0.0 3,741,270 + ABZR86_RS16565 0.81 +0.1 3,741,271 - ABZR86_RS16565 0.81 +0.9 3,741,271 - ABZR86_RS16565 0.81 -0.5 3,741,278 + ABZR86_RS16565 0.84 +0.6 3,741,278 + ABZR86_RS16565 0.84 -0.2 3,741,279 - ABZR86_RS16565 0.84 +0.4 3,741,279 - ABZR86_RS16565 0.84 +0.3 3,741,353 + +0.1 3,741,353 + +0.3 3,741,353 + -1.4 3,741,354 - +0.0 3,741,354 - +0.6 3,741,354 - -0.3 3,741,410 + +0.5 3,741,486 + +0.0 3,741,486 + -0.7 3,741,486 + -0.1 3,741,486 + -1.8 3,741,487 - +0.3 3,741,487 - +0.7 3,741,487 - +0.7 3,741,496 - -0.6 3,741,513 + -0.2 3,741,514 - +0.5 3,741,514 - +0.1 3,741,602 + ABZR86_RS16570 0.17 +0.2 3,741,602 + ABZR86_RS16570 0.17 -0.1 3,741,603 - ABZR86_RS16570 0.17 +0.3 3,741,603 - ABZR86_RS16570 0.17 +0.8 3,741,603 - ABZR86_RS16570 0.17 -0.4 3,741,603 - ABZR86_RS16570 0.17 +0.6 3,741,603 - ABZR86_RS16570 0.17 -0.2 3,741,699 + ABZR86_RS16570 0.31 +0.9 3,741,700 - ABZR86_RS16570 0.32 -0.2 3,741,966 + ABZR86_RS16570 0.70 -0.8 3,741,982 - ABZR86_RS16570 0.73 +2.2 3,741,996 + ABZR86_RS16570 0.75 +1.0 3,741,996 + ABZR86_RS16570 0.75 -0.6 3,741,997 - ABZR86_RS16570 0.75 +0.1 3,741,997 - ABZR86_RS16570 0.75 +0.2 3,741,997 - ABZR86_RS16570 0.75 +0.7 3,742,071 + ABZR86_RS16570 0.86 +0.3 3,742,071 + ABZR86_RS16570 0.86 +0.3 3,742,177 - -0.3 3,742,288 - ABZR86_RS16575 0.21 -0.0 3,742,352 - ABZR86_RS16575 0.33 +0.6 3,742,711 + -0.1 3,742,712 - -0.2 3,742,936 + ABZR86_RS16580 0.24 +1.1 3,742,937 - ABZR86_RS16580 0.24 -0.3 3,742,969 + ABZR86_RS16580 0.29 +0.6 3,742,978 + ABZR86_RS16580 0.31 -0.4 3,742,979 - ABZR86_RS16580 0.31 +0.5 3,743,054 - ABZR86_RS16580 0.42 -0.8 3,743,273 + ABZR86_RS16580 0.75 -0.0 3,743,274 - ABZR86_RS16580 0.75 -0.2 3,743,290 + ABZR86_RS16580 0.78 +0.2 3,743,312 + ABZR86_RS16580 0.81 -0.1 3,743,313 - ABZR86_RS16580 0.81 -0.1 3,743,509 + -0.9 3,743,510 - -0.1 3,743,510 - +0.0 3,743,666 - ABZR86_RS16585 0.33 +0.8
Or see this region's nucleotide sequence