Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS15160 and ABZR86_RS15165 are separated by 50 nucleotides ABZR86_RS15165 and ABZR86_RS15170 are separated by 11 nucleotides ABZR86_RS15170 and ABZR86_RS15175 are separated by 5 nucleotides ABZR86_RS15175 and ABZR86_RS15180 are separated by 164 nucleotides
ABZR86_RS15160: ABZR86_RS15160 - energy transducer TonB, at 3,413,868 to 3,414,527
_RS15160
ABZR86_RS15165: ABZR86_RS15165 - MotA/TolQ/ExbB proton channel family protein, at 3,414,578 to 3,415,330
_RS15165
ABZR86_RS15170: ABZR86_RS15170 - biopolymer transporter ExbD, at 3,415,342 to 3,415,755
_RS15170
ABZR86_RS15175: ABZR86_RS15175 - biopolymer transporter ExbD, at 3,415,761 to 3,416,168
_RS15175
ABZR86_RS15180: ABZR86_RS15180 - pyridoxine 5'-phosphate synthase, at 3,416,333 to 3,417,082
_RS15180
Position (kb)
3415
3416 Strain fitness (log2 ratio)
-1
0
1 at 3414.486 kb on + strand at 3414.525 kb on + strand at 3414.526 kb on - strand at 3414.577 kb on + strand at 3414.577 kb on + strand at 3415.753 kb on + strand at 3415.753 kb on + strand at 3416.091 kb on + strand, within ABZR86_RS15175 at 3416.153 kb on + strand at 3416.195 kb on - strand at 3416.268 kb on + strand at 3416.268 kb on + strand at 3416.268 kb on + strand at 3416.269 kb on - strand at 3416.269 kb on - strand at 3416.270 kb on + strand at 3416.271 kb on - strand at 3416.271 kb on - strand at 3416.271 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 3,414,486 + -0.1 3,414,525 + +0.5 3,414,526 - +0.3 3,414,577 + +1.1 3,414,577 + +1.3 3,415,753 + +0.6 3,415,753 + +0.1 3,416,091 + ABZR86_RS15175 0.81 -0.3 3,416,153 + -0.6 3,416,195 - +0.2 3,416,268 + -0.7 3,416,268 + -0.1 3,416,268 + -0.2 3,416,269 - +0.1 3,416,269 - +0.2 3,416,270 + -0.5 3,416,271 - +0.7 3,416,271 - -0.6 3,416,271 - +1.5
Or see this region's nucleotide sequence