Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS13570

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS13560 and ABZR86_RS13565 overlap by 53 nucleotidesABZR86_RS13565 and ABZR86_RS13570 overlap by 4 nucleotidesABZR86_RS13570 and ABZR86_RS13575 are separated by 71 nucleotidesABZR86_RS13575 and ABZR86_RS13580 are separated by 94 nucleotides ABZR86_RS13560: ABZR86_RS13560 - LolA-related protein, at 3,036,852 to 3,037,493 _RS13560 ABZR86_RS13565: ABZR86_RS13565 - acyltransferase, at 3,037,441 to 3,038,394 _RS13565 ABZR86_RS13570: ABZR86_RS13570 - hydroxymyristoyl-ACP dehydratase, at 3,038,391 to 3,038,690 _RS13570 ABZR86_RS13575: ABZR86_RS13575 - phosphopantetheine-binding protein, at 3,038,762 to 3,039,034 _RS13575 ABZR86_RS13580: ABZR86_RS13580 - pteridine-dependent deoxygenase, at 3,039,129 to 3,040,121 _RS13580 Position (kb) 3038 3039Strain fitness (log2 ratio) -2 -1 0 1at 3037.517 kb on + strandat 3037.517 kb on + strandat 3037.533 kb on + strandat 3037.534 kb on - strandat 3037.534 kb on - strandat 3037.534 kb on - strandat 3037.534 kb on - strandat 3037.534 kb on - strandat 3037.535 kb on + strandat 3037.535 kb on + strandat 3037.535 kb on + strandat 3037.535 kb on + strandat 3037.535 kb on + strandat 3037.535 kb on + strandat 3037.536 kb on - strandat 3037.536 kb on - strandat 3037.553 kb on + strand, within ABZR86_RS13565at 3037.553 kb on + strand, within ABZR86_RS13565at 3037.553 kb on + strand, within ABZR86_RS13565at 3037.553 kb on + strand, within ABZR86_RS13565at 3037.553 kb on + strand, within ABZR86_RS13565at 3037.553 kb on + strand, within ABZR86_RS13565at 3037.553 kb on + strand, within ABZR86_RS13565at 3037.553 kb on + strand, within ABZR86_RS13565at 3037.553 kb on + strand, within ABZR86_RS13565at 3037.553 kb on + strand, within ABZR86_RS13565at 3037.554 kb on - strand, within ABZR86_RS13565at 3037.554 kb on - strand, within ABZR86_RS13565at 3037.554 kb on - strand, within ABZR86_RS13565at 3037.554 kb on - strand, within ABZR86_RS13565at 3037.554 kb on - strand, within ABZR86_RS13565at 3037.554 kb on - strand, within ABZR86_RS13565at 3037.554 kb on - strand, within ABZR86_RS13565at 3037.554 kb on - strand, within ABZR86_RS13565at 3037.554 kb on - strand, within ABZR86_RS13565at 3037.554 kb on - strand, within ABZR86_RS13565at 3037.554 kb on - strand, within ABZR86_RS13565at 3037.554 kb on - strand, within ABZR86_RS13565at 3037.554 kb on - strand, within ABZR86_RS13565at 3037.716 kb on + strand, within ABZR86_RS13565at 3037.716 kb on + strand, within ABZR86_RS13565at 3037.716 kb on + strand, within ABZR86_RS13565at 3037.716 kb on + strand, within ABZR86_RS13565at 3037.717 kb on - strand, within ABZR86_RS13565at 3037.717 kb on - strand, within ABZR86_RS13565at 3037.717 kb on - strand, within ABZR86_RS13565at 3038.264 kb on + strand, within ABZR86_RS13565at 3038.264 kb on + strand, within ABZR86_RS13565at 3038.264 kb on + strand, within ABZR86_RS13565at 3038.264 kb on + strand, within ABZR86_RS13565at 3038.264 kb on + strand, within ABZR86_RS13565at 3038.270 kb on + strand, within ABZR86_RS13565at 3038.270 kb on + strand, within ABZR86_RS13565at 3038.270 kb on + strand, within ABZR86_RS13565at 3038.271 kb on - strand, within ABZR86_RS13565at 3038.271 kb on - strand, within ABZR86_RS13565at 3038.318 kb on + strandat 3038.331 kb on + strandat 3038.332 kb on - strandat 3038.332 kb on - strandat 3038.677 kb on + strandat 3038.677 kb on + strandat 3038.677 kb on + strandat 3038.677 kb on + strandat 3038.678 kb on - strandat 3038.678 kb on - strandat 3038.862 kb on + strand, within ABZR86_RS13575at 3038.863 kb on - strand, within ABZR86_RS13575at 3039.056 kb on + strandat 3039.056 kb on + strandat 3039.056 kb on + strandat 3039.057 kb on - strandat 3039.057 kb on - strandat 3039.057 kb on - strandat 3039.057 kb on - strandat 3039.057 kb on - strandat 3039.094 kb on + strandat 3039.094 kb on + strandat 3039.094 kb on + strandat 3039.094 kb on + strandat 3039.094 kb on + strandat 3039.094 kb on + strandat 3039.094 kb on + strandat 3039.094 kb on + strandat 3039.095 kb on - strandat 3039.095 kb on - strandat 3039.095 kb on - strandat 3039.095 kb on - strandat 3039.095 kb on - strandat 3039.095 kb on - strandat 3039.095 kb on - strandat 3039.095 kb on - strandat 3039.193 kb on - strandat 3039.193 kb on - strandat 3039.289 kb on - strand, within ABZR86_RS13580at 3039.337 kb on + strand, within ABZR86_RS13580at 3039.337 kb on + strand, within ABZR86_RS13580at 3039.337 kb on + strand, within ABZR86_RS13580at 3039.337 kb on + strand, within ABZR86_RS13580at 3039.337 kb on + strand, within ABZR86_RS13580at 3039.337 kb on + strand, within ABZR86_RS13580at 3039.338 kb on - strand, within ABZR86_RS13580at 3039.338 kb on - strand, within ABZR86_RS13580at 3039.338 kb on - strand, within ABZR86_RS13580at 3039.537 kb on + strand, within ABZR86_RS13580at 3039.537 kb on + strand, within ABZR86_RS13580at 3039.537 kb on + strand, within ABZR86_RS13580at 3039.537 kb on + strand, within ABZR86_RS13580at 3039.537 kb on + strand, within ABZR86_RS13580at 3039.538 kb on - strand, within ABZR86_RS13580at 3039.538 kb on - strand, within ABZR86_RS13580at 3039.538 kb on - strand, within ABZR86_RS13580at 3039.579 kb on + strand, within ABZR86_RS13580at 3039.579 kb on + strand, within ABZR86_RS13580at 3039.579 kb on + strand, within ABZR86_RS13580at 3039.579 kb on + strand, within ABZR86_RS13580at 3039.579 kb on + strand, within ABZR86_RS13580at 3039.690 kb on + strand, within ABZR86_RS13580

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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3,037,517 + -0.3
3,037,517 + -0.2
3,037,533 + -0.3
3,037,534 - +1.5
3,037,534 - -0.5
3,037,534 - -0.6
3,037,534 - +0.6
3,037,534 - +0.7
3,037,535 + +0.1
3,037,535 + +0.1
3,037,535 + -0.6
3,037,535 + +0.1
3,037,535 + -0.7
3,037,535 + -0.4
3,037,536 - +0.1
3,037,536 - -0.9
3,037,553 + ABZR86_RS13565 0.12 -0.5
3,037,553 + ABZR86_RS13565 0.12 -0.5
3,037,553 + ABZR86_RS13565 0.12 +0.1
3,037,553 + ABZR86_RS13565 0.12 -0.3
3,037,553 + ABZR86_RS13565 0.12 -0.5
3,037,553 + ABZR86_RS13565 0.12 -0.8
3,037,553 + ABZR86_RS13565 0.12 +0.5
3,037,553 + ABZR86_RS13565 0.12 -0.6
3,037,553 + ABZR86_RS13565 0.12 -0.8
3,037,553 + ABZR86_RS13565 0.12 +0.5
3,037,554 - ABZR86_RS13565 0.12 +0.0
3,037,554 - ABZR86_RS13565 0.12 -0.6
3,037,554 - ABZR86_RS13565 0.12 +0.2
3,037,554 - ABZR86_RS13565 0.12 +0.5
3,037,554 - ABZR86_RS13565 0.12 +0.4
3,037,554 - ABZR86_RS13565 0.12 -0.2
3,037,554 - ABZR86_RS13565 0.12 +0.3
3,037,554 - ABZR86_RS13565 0.12 -0.5
3,037,554 - ABZR86_RS13565 0.12 -0.4
3,037,554 - ABZR86_RS13565 0.12 -0.1
3,037,554 - ABZR86_RS13565 0.12 +0.4
3,037,554 - ABZR86_RS13565 0.12 +0.5
3,037,554 - ABZR86_RS13565 0.12 +0.5
3,037,716 + ABZR86_RS13565 0.29 -0.5
3,037,716 + ABZR86_RS13565 0.29 +0.2
3,037,716 + ABZR86_RS13565 0.29 -0.1
3,037,716 + ABZR86_RS13565 0.29 +0.4
3,037,717 - ABZR86_RS13565 0.29 +1.0
3,037,717 - ABZR86_RS13565 0.29 -0.1
3,037,717 - ABZR86_RS13565 0.29 +0.2
3,038,264 + ABZR86_RS13565 0.86 -0.8
3,038,264 + ABZR86_RS13565 0.86 +0.6
3,038,264 + ABZR86_RS13565 0.86 -0.1
3,038,264 + ABZR86_RS13565 0.86 +0.2
3,038,264 + ABZR86_RS13565 0.86 -1.0
3,038,270 + ABZR86_RS13565 0.87 -0.8
3,038,270 + ABZR86_RS13565 0.87 -0.2
3,038,270 + ABZR86_RS13565 0.87 -0.4
3,038,271 - ABZR86_RS13565 0.87 -0.3
3,038,271 - ABZR86_RS13565 0.87 +0.1
3,038,318 + -1.8
3,038,331 + +0.6
3,038,332 - -0.7
3,038,332 - +0.6
3,038,677 + -0.3
3,038,677 + -0.2
3,038,677 + +0.3
3,038,677 + +1.2
3,038,678 - +0.2
3,038,678 - -0.2
3,038,862 + ABZR86_RS13575 0.37 -1.8
3,038,863 - ABZR86_RS13575 0.37 +1.1
3,039,056 + -0.4
3,039,056 + +0.8
3,039,056 + +0.2
3,039,057 - +0.9
3,039,057 - +0.4
3,039,057 - -0.0
3,039,057 - +0.1
3,039,057 - -0.2
3,039,094 + -0.1
3,039,094 + -0.3
3,039,094 + -0.3
3,039,094 + -0.8
3,039,094 + +0.5
3,039,094 + +0.3
3,039,094 + -0.4
3,039,094 + +0.5
3,039,095 - +0.5
3,039,095 - -0.4
3,039,095 - +0.2
3,039,095 - +0.4
3,039,095 - +0.0
3,039,095 - +0.5
3,039,095 - +0.1
3,039,095 - -0.0
3,039,193 - -0.7
3,039,193 - -0.6
3,039,289 - ABZR86_RS13580 0.16 -2.4
3,039,337 + ABZR86_RS13580 0.21 -1.1
3,039,337 + ABZR86_RS13580 0.21 +0.0
3,039,337 + ABZR86_RS13580 0.21 -0.4
3,039,337 + ABZR86_RS13580 0.21 -1.0
3,039,337 + ABZR86_RS13580 0.21 +0.6
3,039,337 + ABZR86_RS13580 0.21 -0.7
3,039,338 - ABZR86_RS13580 0.21 -0.8
3,039,338 - ABZR86_RS13580 0.21 +0.1
3,039,338 - ABZR86_RS13580 0.21 -0.6
3,039,537 + ABZR86_RS13580 0.41 +0.7
3,039,537 + ABZR86_RS13580 0.41 -0.8
3,039,537 + ABZR86_RS13580 0.41 +0.9
3,039,537 + ABZR86_RS13580 0.41 +0.2
3,039,537 + ABZR86_RS13580 0.41 -0.7
3,039,538 - ABZR86_RS13580 0.41 +1.0
3,039,538 - ABZR86_RS13580 0.41 -1.1
3,039,538 - ABZR86_RS13580 0.41 -0.9
3,039,579 + ABZR86_RS13580 0.45 +0.4
3,039,579 + ABZR86_RS13580 0.45 +0.0
3,039,579 + ABZR86_RS13580 0.45 +0.4
3,039,579 + ABZR86_RS13580 0.45 -1.2
3,039,579 + ABZR86_RS13580 0.45 -0.6
3,039,690 + ABZR86_RS13580 0.56 +0.5

Or see this region's nucleotide sequence