Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS13320 and ABZR86_RS13325 overlap by 22 nucleotides ABZR86_RS13325 and ABZR86_RS13330 are separated by 98 nucleotides ABZR86_RS13330 and ABZR86_RS13335 are separated by 12 nucleotides ABZR86_RS13335 and ABZR86_RS13340 are separated by 92 nucleotides
ABZR86_RS13320: ABZR86_RS13320 - GldG family protein, at 2,988,577 to 2,989,929
_RS13320
ABZR86_RS13325: ABZR86_RS13325 - hypothetical protein, at 2,989,908 to 2,990,408
_RS13325
ABZR86_RS13330: ABZR86_RS13330 - NADP-dependent phosphogluconate dehydrogenase, at 2,990,507 to 2,991,928
_RS13330
ABZR86_RS13335: ABZR86_RS13335 - bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase, at 2,991,941 to 2,992,765
_RS13335
ABZR86_RS13340: ABZR86_RS13340 - hypothetical protein, at 2,992,858 to 2,993,622
_RS13340
Position (kb)
2990
2991
2992 Strain fitness (log2 ratio)
-2
-1
0
1 at 2990.094 kb on + strand, within ABZR86_RS13325 at 2990.094 kb on + strand, within ABZR86_RS13325 at 2990.094 kb on + strand, within ABZR86_RS13325 at 2990.095 kb on - strand, within ABZR86_RS13325 at 2990.095 kb on - strand, within ABZR86_RS13325 at 2990.095 kb on - strand, within ABZR86_RS13325 at 2990.095 kb on - strand, within ABZR86_RS13325 at 2990.095 kb on - strand, within ABZR86_RS13325 at 2990.095 kb on - strand, within ABZR86_RS13325 at 2990.322 kb on + strand, within ABZR86_RS13325 at 2990.322 kb on + strand, within ABZR86_RS13325 at 2990.322 kb on + strand, within ABZR86_RS13325 at 2990.322 kb on + strand, within ABZR86_RS13325 at 2990.323 kb on - strand, within ABZR86_RS13325 at 2990.323 kb on - strand, within ABZR86_RS13325 at 2990.323 kb on - strand, within ABZR86_RS13325 at 2990.323 kb on - strand, within ABZR86_RS13325 at 2990.426 kb on + strand at 2990.426 kb on + strand at 2990.426 kb on + strand at 2990.426 kb on + strand at 2990.427 kb on - strand at 2990.427 kb on - strand at 2990.427 kb on - strand at 2990.427 kb on - strand at 2990.467 kb on - strand at 2990.484 kb on + strand at 2990.581 kb on + strand at 2990.612 kb on + strand at 2990.612 kb on + strand at 2990.612 kb on + strand at 2990.612 kb on + strand at 2990.612 kb on + strand at 2990.612 kb on + strand at 2990.613 kb on - strand at 2990.613 kb on - strand at 2990.613 kb on - strand at 2990.613 kb on - strand at 2990.613 kb on - strand at 2990.613 kb on - strand at 2990.681 kb on + strand, within ABZR86_RS13330 at 2990.681 kb on + strand, within ABZR86_RS13330 at 2990.682 kb on - strand, within ABZR86_RS13330 at 2990.682 kb on - strand, within ABZR86_RS13330 at 2990.682 kb on - strand, within ABZR86_RS13330 at 2990.963 kb on + strand, within ABZR86_RS13330 at 2990.963 kb on + strand, within ABZR86_RS13330 at 2990.963 kb on + strand, within ABZR86_RS13330 at 2990.963 kb on + strand, within ABZR86_RS13330 at 2990.963 kb on + strand, within ABZR86_RS13330 at 2990.964 kb on - strand, within ABZR86_RS13330 at 2990.964 kb on - strand, within ABZR86_RS13330 at 2990.964 kb on - strand, within ABZR86_RS13330 at 2990.964 kb on - strand, within ABZR86_RS13330 at 2990.964 kb on - strand, within ABZR86_RS13330 at 2990.964 kb on - strand, within ABZR86_RS13330 at 2991.032 kb on + strand, within ABZR86_RS13330 at 2991.032 kb on + strand, within ABZR86_RS13330 at 2991.032 kb on + strand, within ABZR86_RS13330 at 2991.032 kb on + strand, within ABZR86_RS13330 at 2991.032 kb on + strand, within ABZR86_RS13330 at 2991.032 kb on + strand, within ABZR86_RS13330 at 2991.032 kb on + strand, within ABZR86_RS13330 at 2991.032 kb on + strand, within ABZR86_RS13330 at 2991.032 kb on + strand, within ABZR86_RS13330 at 2991.032 kb on + strand, within ABZR86_RS13330 at 2991.032 kb on + strand, within ABZR86_RS13330 at 2991.032 kb on + strand, within ABZR86_RS13330 at 2991.032 kb on + strand, within ABZR86_RS13330 at 2991.033 kb on - strand, within ABZR86_RS13330 at 2991.033 kb on - strand, within ABZR86_RS13330 at 2991.033 kb on - strand, within ABZR86_RS13330 at 2991.060 kb on - strand, within ABZR86_RS13330 at 2991.060 kb on - strand, within ABZR86_RS13330 at 2991.090 kb on - strand, within ABZR86_RS13330 at 2991.119 kb on + strand, within ABZR86_RS13330 at 2991.119 kb on + strand, within ABZR86_RS13330 at 2991.119 kb on + strand, within ABZR86_RS13330 at 2991.119 kb on + strand, within ABZR86_RS13330 at 2991.120 kb on - strand, within ABZR86_RS13330 at 2991.120 kb on - strand, within ABZR86_RS13330 at 2991.120 kb on - strand, within ABZR86_RS13330 at 2991.120 kb on - strand, within ABZR86_RS13330 at 2991.120 kb on - strand, within ABZR86_RS13330 at 2991.174 kb on - strand, within ABZR86_RS13330 at 2991.206 kb on + strand, within ABZR86_RS13330 at 2991.206 kb on + strand, within ABZR86_RS13330 at 2991.206 kb on + strand, within ABZR86_RS13330 at 2991.206 kb on + strand, within ABZR86_RS13330 at 2991.206 kb on + strand, within ABZR86_RS13330 at 2991.206 kb on + strand, within ABZR86_RS13330 at 2991.206 kb on + strand, within ABZR86_RS13330 at 2991.206 kb on + strand, within ABZR86_RS13330 at 2991.206 kb on + strand, within ABZR86_RS13330 at 2991.206 kb on + strand, within ABZR86_RS13330 at 2991.207 kb on - strand, within ABZR86_RS13330 at 2991.207 kb on - strand, within ABZR86_RS13330 at 2991.207 kb on - strand, within ABZR86_RS13330 at 2991.207 kb on - strand, within ABZR86_RS13330 at 2991.500 kb on + strand, within ABZR86_RS13330 at 2991.501 kb on - strand, within ABZR86_RS13330 at 2991.501 kb on - strand, within ABZR86_RS13330 at 2991.521 kb on + strand, within ABZR86_RS13330 at 2991.522 kb on - strand, within ABZR86_RS13330 at 2991.563 kb on + strand, within ABZR86_RS13330 at 2991.563 kb on + strand, within ABZR86_RS13330 at 2991.564 kb on - strand, within ABZR86_RS13330 at 2991.564 kb on - strand, within ABZR86_RS13330 at 2991.564 kb on - strand, within ABZR86_RS13330 at 2991.564 kb on - strand, within ABZR86_RS13330 at 2991.564 kb on - strand, within ABZR86_RS13330 at 2991.581 kb on + strand, within ABZR86_RS13330 at 2991.581 kb on + strand, within ABZR86_RS13330 at 2991.657 kb on - strand, within ABZR86_RS13330 at 2991.657 kb on - strand, within ABZR86_RS13330 at 2991.657 kb on - strand, within ABZR86_RS13330 at 2991.698 kb on + strand, within ABZR86_RS13330 at 2991.698 kb on + strand, within ABZR86_RS13330 at 2991.699 kb on - strand, within ABZR86_RS13330 at 2991.699 kb on - strand, within ABZR86_RS13330 at 2991.722 kb on + strand, within ABZR86_RS13330 at 2991.803 kb on + strand at 2991.803 kb on + strand at 2991.804 kb on - strand at 2991.804 kb on - strand at 2991.804 kb on - strand at 2991.806 kb on + strand at 2991.806 kb on + strand at 2991.807 kb on - strand at 2991.807 kb on - strand at 2991.815 kb on + strand at 2991.816 kb on - strand at 2991.816 kb on - strand at 2991.877 kb on + strand at 2991.877 kb on + strand at 2991.877 kb on + strand at 2991.877 kb on + strand at 2991.877 kb on + strand at 2991.878 kb on - strand at 2991.878 kb on - strand at 2991.878 kb on - strand at 2992.115 kb on + strand, within ABZR86_RS13335 at 2992.115 kb on + strand, within ABZR86_RS13335 at 2992.116 kb on - strand, within ABZR86_RS13335 at 2992.449 kb on + strand, within ABZR86_RS13335 at 2992.450 kb on - strand, within ABZR86_RS13335 at 2992.450 kb on - strand, within ABZR86_RS13335 at 2992.462 kb on + strand, within ABZR86_RS13335 at 2992.462 kb on + strand, within ABZR86_RS13335 at 2992.462 kb on + strand, within ABZR86_RS13335 at 2992.462 kb on + strand, within ABZR86_RS13335 at 2992.462 kb on + strand, within ABZR86_RS13335 at 2992.462 kb on + strand, within ABZR86_RS13335 at 2992.462 kb on + strand, within ABZR86_RS13335 at 2992.462 kb on + strand, within ABZR86_RS13335 at 2992.462 kb on + strand, within ABZR86_RS13335 at 2992.463 kb on - strand, within ABZR86_RS13335 at 2992.463 kb on - strand, within ABZR86_RS13335 at 2992.463 kb on - strand, within ABZR86_RS13335 at 2992.463 kb on - strand, within ABZR86_RS13335 at 2992.463 kb on - strand, within ABZR86_RS13335 at 2992.463 kb on - strand, within ABZR86_RS13335 at 2992.463 kb on - strand, within ABZR86_RS13335 at 2992.463 kb on - strand, within ABZR86_RS13335 at 2992.463 kb on - strand, within ABZR86_RS13335 at 2992.463 kb on - strand, within ABZR86_RS13335 at 2992.463 kb on - strand, within ABZR86_RS13335 at 2992.463 kb on - strand, within ABZR86_RS13335 at 2992.463 kb on - strand, within ABZR86_RS13335 at 2992.466 kb on + strand, within ABZR86_RS13335 at 2992.466 kb on + strand, within ABZR86_RS13335 at 2992.466 kb on + strand, within ABZR86_RS13335 at 2992.466 kb on + strand, within ABZR86_RS13335 at 2992.466 kb on + strand, within ABZR86_RS13335 at 2992.466 kb on + strand, within ABZR86_RS13335 at 2992.466 kb on + strand, within ABZR86_RS13335 at 2992.466 kb on + strand, within ABZR86_RS13335 at 2992.467 kb on - strand, within ABZR86_RS13335 at 2992.467 kb on - strand, within ABZR86_RS13335 at 2992.467 kb on - strand, within ABZR86_RS13335 at 2992.467 kb on - strand, within ABZR86_RS13335 at 2992.538 kb on + strand, within ABZR86_RS13335 at 2992.538 kb on + strand, within ABZR86_RS13335 at 2992.538 kb on + strand, within ABZR86_RS13335 at 2992.538 kb on + strand, within ABZR86_RS13335 at 2992.539 kb on - strand, within ABZR86_RS13335 at 2992.539 kb on - strand, within ABZR86_RS13335 at 2992.539 kb on - strand, within ABZR86_RS13335 at 2992.539 kb on - strand, within ABZR86_RS13335 at 2992.640 kb on + strand, within ABZR86_RS13335 at 2992.640 kb on + strand, within ABZR86_RS13335 at 2992.641 kb on - strand, within ABZR86_RS13335 at 2992.664 kb on + strand, within ABZR86_RS13335 at 2992.664 kb on + strand, within ABZR86_RS13335 at 2992.664 kb on + strand, within ABZR86_RS13335 at 2992.664 kb on + strand, within ABZR86_RS13335 at 2992.665 kb on - strand, within ABZR86_RS13335 at 2992.775 kb on + strand at 2992.775 kb on + strand at 2992.776 kb on - strand at 2992.859 kb on + strand at 2992.859 kb on + strand at 2992.859 kb on + strand at 2992.859 kb on + strand at 2992.860 kb on - strand at 2992.860 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 2,990,094 + ABZR86_RS13325 0.37 +0.1 2,990,094 + ABZR86_RS13325 0.37 -0.9 2,990,094 + ABZR86_RS13325 0.37 -0.2 2,990,095 - ABZR86_RS13325 0.37 +0.3 2,990,095 - ABZR86_RS13325 0.37 +0.2 2,990,095 - ABZR86_RS13325 0.37 +0.7 2,990,095 - ABZR86_RS13325 0.37 -0.2 2,990,095 - ABZR86_RS13325 0.37 +0.2 2,990,095 - ABZR86_RS13325 0.37 -0.1 2,990,322 + ABZR86_RS13325 0.83 -0.0 2,990,322 + ABZR86_RS13325 0.83 -0.7 2,990,322 + ABZR86_RS13325 0.83 -0.6 2,990,322 + ABZR86_RS13325 0.83 -0.8 2,990,323 - ABZR86_RS13325 0.83 -1.1 2,990,323 - ABZR86_RS13325 0.83 -0.3 2,990,323 - ABZR86_RS13325 0.83 -0.6 2,990,323 - ABZR86_RS13325 0.83 +0.5 2,990,426 + +0.2 2,990,426 + -0.3 2,990,426 + -1.1 2,990,426 + -0.6 2,990,427 - -1.5 2,990,427 - -1.3 2,990,427 - -0.8 2,990,427 - +0.2 2,990,467 - +0.7 2,990,484 + -0.1 2,990,581 + +0.0 2,990,612 + -0.3 2,990,612 + -0.5 2,990,612 + -0.5 2,990,612 + +0.0 2,990,612 + +0.4 2,990,612 + -1.6 2,990,613 - +0.6 2,990,613 - -0.7 2,990,613 - -0.4 2,990,613 - -0.3 2,990,613 - -1.0 2,990,613 - +0.3 2,990,681 + ABZR86_RS13330 0.12 -0.4 2,990,681 + ABZR86_RS13330 0.12 -1.0 2,990,682 - ABZR86_RS13330 0.12 -1.8 2,990,682 - ABZR86_RS13330 0.12 -0.3 2,990,682 - ABZR86_RS13330 0.12 +0.6 2,990,963 + ABZR86_RS13330 0.32 -1.0 2,990,963 + ABZR86_RS13330 0.32 +0.7 2,990,963 + ABZR86_RS13330 0.32 -1.2 2,990,963 + ABZR86_RS13330 0.32 -0.9 2,990,963 + ABZR86_RS13330 0.32 +0.0 2,990,964 - ABZR86_RS13330 0.32 -0.3 2,990,964 - ABZR86_RS13330 0.32 -0.9 2,990,964 - ABZR86_RS13330 0.32 -1.1 2,990,964 - ABZR86_RS13330 0.32 -0.7 2,990,964 - ABZR86_RS13330 0.32 -1.0 2,990,964 - ABZR86_RS13330 0.32 -0.4 2,991,032 + ABZR86_RS13330 0.37 +0.0 2,991,032 + ABZR86_RS13330 0.37 -0.6 2,991,032 + ABZR86_RS13330 0.37 -0.8 2,991,032 + ABZR86_RS13330 0.37 -0.3 2,991,032 + ABZR86_RS13330 0.37 -0.1 2,991,032 + ABZR86_RS13330 0.37 -0.8 2,991,032 + ABZR86_RS13330 0.37 +0.3 2,991,032 + ABZR86_RS13330 0.37 -0.6 2,991,032 + ABZR86_RS13330 0.37 -0.9 2,991,032 + ABZR86_RS13330 0.37 -1.1 2,991,032 + ABZR86_RS13330 0.37 -0.1 2,991,032 + ABZR86_RS13330 0.37 -0.1 2,991,032 + ABZR86_RS13330 0.37 -0.2 2,991,033 - ABZR86_RS13330 0.37 -0.5 2,991,033 - ABZR86_RS13330 0.37 -0.2 2,991,033 - ABZR86_RS13330 0.37 -0.9 2,991,060 - ABZR86_RS13330 0.39 -0.6 2,991,060 - ABZR86_RS13330 0.39 -0.6 2,991,090 - ABZR86_RS13330 0.41 -0.8 2,991,119 + ABZR86_RS13330 0.43 -1.1 2,991,119 + ABZR86_RS13330 0.43 -0.2 2,991,119 + ABZR86_RS13330 0.43 -0.4 2,991,119 + ABZR86_RS13330 0.43 +0.5 2,991,120 - ABZR86_RS13330 0.43 -0.6 2,991,120 - ABZR86_RS13330 0.43 -0.2 2,991,120 - ABZR86_RS13330 0.43 -0.7 2,991,120 - ABZR86_RS13330 0.43 -0.1 2,991,120 - ABZR86_RS13330 0.43 -0.2 2,991,174 - ABZR86_RS13330 0.47 -0.8 2,991,206 + ABZR86_RS13330 0.49 -1.4 2,991,206 + ABZR86_RS13330 0.49 -2.0 2,991,206 + ABZR86_RS13330 0.49 -0.3 2,991,206 + ABZR86_RS13330 0.49 -1.0 2,991,206 + ABZR86_RS13330 0.49 -0.9 2,991,206 + ABZR86_RS13330 0.49 -1.0 2,991,206 + ABZR86_RS13330 0.49 -0.3 2,991,206 + ABZR86_RS13330 0.49 +0.5 2,991,206 + ABZR86_RS13330 0.49 -0.6 2,991,206 + ABZR86_RS13330 0.49 -0.0 2,991,207 - ABZR86_RS13330 0.49 -0.5 2,991,207 - ABZR86_RS13330 0.49 +0.9 2,991,207 - ABZR86_RS13330 0.49 -0.6 2,991,207 - ABZR86_RS13330 0.49 -0.3 2,991,500 + ABZR86_RS13330 0.70 -0.1 2,991,501 - ABZR86_RS13330 0.70 -0.5 2,991,501 - ABZR86_RS13330 0.70 +0.2 2,991,521 + ABZR86_RS13330 0.71 -0.2 2,991,522 - ABZR86_RS13330 0.71 -0.8 2,991,563 + ABZR86_RS13330 0.74 -1.3 2,991,563 + ABZR86_RS13330 0.74 -0.9 2,991,564 - ABZR86_RS13330 0.74 -0.5 2,991,564 - ABZR86_RS13330 0.74 -0.1 2,991,564 - ABZR86_RS13330 0.74 -2.3 2,991,564 - ABZR86_RS13330 0.74 +0.2 2,991,564 - ABZR86_RS13330 0.74 -0.1 2,991,581 + ABZR86_RS13330 0.76 +0.1 2,991,581 + ABZR86_RS13330 0.76 +0.5 2,991,657 - ABZR86_RS13330 0.81 -0.9 2,991,657 - ABZR86_RS13330 0.81 -0.6 2,991,657 - ABZR86_RS13330 0.81 -0.2 2,991,698 + ABZR86_RS13330 0.84 -1.5 2,991,698 + ABZR86_RS13330 0.84 -1.7 2,991,699 - ABZR86_RS13330 0.84 -0.1 2,991,699 - ABZR86_RS13330 0.84 -0.7 2,991,722 + ABZR86_RS13330 0.85 -0.7 2,991,803 + -0.2 2,991,803 + -0.6 2,991,804 - +0.2 2,991,804 - +0.2 2,991,804 - -1.0 2,991,806 + -0.5 2,991,806 + -0.5 2,991,807 - +0.1 2,991,807 - -0.7 2,991,815 + -1.0 2,991,816 - -1.0 2,991,816 - -1.2 2,991,877 + -0.4 2,991,877 + -0.4 2,991,877 + -0.2 2,991,877 + -0.2 2,991,877 + -0.1 2,991,878 - -0.9 2,991,878 - -0.3 2,991,878 - -0.8 2,992,115 + ABZR86_RS13335 0.21 -0.5 2,992,115 + ABZR86_RS13335 0.21 -0.2 2,992,116 - ABZR86_RS13335 0.21 -0.4 2,992,449 + ABZR86_RS13335 0.62 -0.7 2,992,450 - ABZR86_RS13335 0.62 -0.1 2,992,450 - ABZR86_RS13335 0.62 -0.1 2,992,462 + ABZR86_RS13335 0.63 +0.3 2,992,462 + ABZR86_RS13335 0.63 +0.2 2,992,462 + ABZR86_RS13335 0.63 +0.2 2,992,462 + ABZR86_RS13335 0.63 +0.1 2,992,462 + ABZR86_RS13335 0.63 -0.5 2,992,462 + ABZR86_RS13335 0.63 -1.8 2,992,462 + ABZR86_RS13335 0.63 +0.9 2,992,462 + ABZR86_RS13335 0.63 -0.9 2,992,462 + ABZR86_RS13335 0.63 -0.1 2,992,463 - ABZR86_RS13335 0.63 -0.1 2,992,463 - ABZR86_RS13335 0.63 +0.4 2,992,463 - ABZR86_RS13335 0.63 -0.8 2,992,463 - ABZR86_RS13335 0.63 +0.1 2,992,463 - ABZR86_RS13335 0.63 +0.9 2,992,463 - ABZR86_RS13335 0.63 -0.7 2,992,463 - ABZR86_RS13335 0.63 +0.1 2,992,463 - ABZR86_RS13335 0.63 +0.6 2,992,463 - ABZR86_RS13335 0.63 +0.9 2,992,463 - ABZR86_RS13335 0.63 +0.3 2,992,463 - ABZR86_RS13335 0.63 -0.4 2,992,463 - ABZR86_RS13335 0.63 +0.1 2,992,463 - ABZR86_RS13335 0.63 -0.1 2,992,466 + ABZR86_RS13335 0.64 -1.3 2,992,466 + ABZR86_RS13335 0.64 -0.1 2,992,466 + ABZR86_RS13335 0.64 +0.7 2,992,466 + ABZR86_RS13335 0.64 +0.2 2,992,466 + ABZR86_RS13335 0.64 -0.1 2,992,466 + ABZR86_RS13335 0.64 -0.8 2,992,466 + ABZR86_RS13335 0.64 -0.4 2,992,466 + ABZR86_RS13335 0.64 -0.1 2,992,467 - ABZR86_RS13335 0.64 +0.1 2,992,467 - ABZR86_RS13335 0.64 -0.9 2,992,467 - ABZR86_RS13335 0.64 -0.4 2,992,467 - ABZR86_RS13335 0.64 +0.2 2,992,538 + ABZR86_RS13335 0.72 +0.1 2,992,538 + ABZR86_RS13335 0.72 -0.0 2,992,538 + ABZR86_RS13335 0.72 +0.3 2,992,538 + ABZR86_RS13335 0.72 -0.8 2,992,539 - ABZR86_RS13335 0.72 -0.8 2,992,539 - ABZR86_RS13335 0.72 +0.5 2,992,539 - ABZR86_RS13335 0.72 -0.8 2,992,539 - ABZR86_RS13335 0.72 -0.4 2,992,640 + ABZR86_RS13335 0.85 +0.5 2,992,640 + ABZR86_RS13335 0.85 -0.2 2,992,641 - ABZR86_RS13335 0.85 -0.1 2,992,664 + ABZR86_RS13335 0.88 +0.3 2,992,664 + ABZR86_RS13335 0.88 -0.5 2,992,664 + ABZR86_RS13335 0.88 -0.6 2,992,664 + ABZR86_RS13335 0.88 -0.0 2,992,665 - ABZR86_RS13335 0.88 -0.9 2,992,775 + -0.2 2,992,775 + -0.7 2,992,776 - -0.6 2,992,859 + -0.3 2,992,859 + -0.2 2,992,859 + +0.6 2,992,859 + +0.4 2,992,860 - -0.3 2,992,860 - -0.3
Or see this region's nucleotide sequence