Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS12655 and ABZR86_RS12660 are separated by 249 nucleotides ABZR86_RS12660 and ABZR86_RS12665 are separated by 44 nucleotides ABZR86_RS12665 and ABZR86_RS12670 are separated by 271 nucleotides
ABZR86_RS12655: ABZR86_RS12655 - sensor histidine kinase, at 2,838,350 to 2,839,684
_RS12655
ABZR86_RS12660: ABZR86_RS12660 - glutamate--cysteine ligase, at 2,839,934 to 2,841,301
_RS12660
ABZR86_RS12665: ABZR86_RS12665 - DoxX family protein, at 2,841,346 to 2,841,807
_RS12665
ABZR86_RS12670: ABZR86_RS12670 - hypothetical protein, at 2,842,079 to 2,842,363
_RS12670
Position (kb)
2839
2840
2841
2842 Strain fitness (log2 ratio)
-2
-1
0
1 at 2839.379 kb on - strand, within ABZR86_RS12655 at 2839.503 kb on - strand, within ABZR86_RS12655 at 2839.682 kb on + strand at 2839.682 kb on + strand at 2839.683 kb on - strand at 2839.683 kb on - strand at 2839.683 kb on - strand at 2839.683 kb on - strand at 2839.683 kb on - strand at 2839.683 kb on - strand at 2839.683 kb on - strand at 2839.793 kb on - strand at 2839.886 kb on + strand at 2839.886 kb on + strand at 2841.297 kb on - strand at 2841.443 kb on + strand, within ABZR86_RS12665 at 2841.443 kb on + strand, within ABZR86_RS12665 at 2841.443 kb on + strand, within ABZR86_RS12665 at 2841.444 kb on - strand, within ABZR86_RS12665 at 2841.444 kb on - strand, within ABZR86_RS12665 at 2841.444 kb on - strand, within ABZR86_RS12665 at 2841.444 kb on - strand, within ABZR86_RS12665 at 2841.444 kb on - strand, within ABZR86_RS12665 at 2841.468 kb on - strand, within ABZR86_RS12665 at 2841.468 kb on - strand, within ABZR86_RS12665 at 2841.468 kb on - strand, within ABZR86_RS12665 at 2841.468 kb on - strand, within ABZR86_RS12665 at 2841.636 kb on + strand, within ABZR86_RS12665 at 2841.710 kb on + strand, within ABZR86_RS12665 at 2841.710 kb on + strand, within ABZR86_RS12665 at 2842.074 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 2,839,379 - ABZR86_RS12655 0.77 +0.1 2,839,503 - ABZR86_RS12655 0.86 -0.8 2,839,682 + -0.3 2,839,682 + -0.1 2,839,683 - -2.1 2,839,683 - -0.8 2,839,683 - -0.0 2,839,683 - -1.3 2,839,683 - +0.4 2,839,683 - -1.0 2,839,683 - -0.4 2,839,793 - -1.3 2,839,886 + -0.6 2,839,886 + +0.1 2,841,297 - -0.1 2,841,443 + ABZR86_RS12665 0.21 +0.5 2,841,443 + ABZR86_RS12665 0.21 -0.8 2,841,443 + ABZR86_RS12665 0.21 -0.1 2,841,444 - ABZR86_RS12665 0.21 -0.6 2,841,444 - ABZR86_RS12665 0.21 -0.2 2,841,444 - ABZR86_RS12665 0.21 -2.3 2,841,444 - ABZR86_RS12665 0.21 +0.1 2,841,444 - ABZR86_RS12665 0.21 +0.0 2,841,468 - ABZR86_RS12665 0.26 -0.5 2,841,468 - ABZR86_RS12665 0.26 +0.3 2,841,468 - ABZR86_RS12665 0.26 +0.2 2,841,468 - ABZR86_RS12665 0.26 +0.3 2,841,636 + ABZR86_RS12665 0.63 -0.2 2,841,710 + ABZR86_RS12665 0.79 -0.1 2,841,710 + ABZR86_RS12665 0.79 -0.2 2,842,074 + -0.5
Or see this region's nucleotide sequence