Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS10110 and ABZR86_RS10115 are separated by 226 nucleotides ABZR86_RS10115 and ABZR86_RS10120 are separated by 126 nucleotides
ABZR86_RS10110: ABZR86_RS10110 - ATP-binding protein, at 2,244,831 to 2,246,117
_RS10110
ABZR86_RS10115: ABZR86_RS10115 - response regulator transcription factor, at 2,246,344 to 2,246,907
_RS10115
ABZR86_RS10120: ABZR86_RS10120 - TonB-dependent receptor, at 2,247,034 to 2,249,283
_RS10120
Position (kb)
2246
2247 Strain fitness (log2 ratio)
-1
0
1 at 2246.098 kb on + strand at 2246.098 kb on + strand at 2246.098 kb on + strand at 2246.099 kb on - strand at 2246.099 kb on - strand at 2246.099 kb on - strand at 2246.099 kb on - strand at 2246.099 kb on - strand at 2246.119 kb on + strand at 2246.119 kb on + strand at 2246.120 kb on - strand at 2246.128 kb on + strand at 2246.920 kb on + strand at 2246.920 kb on + strand at 2246.920 kb on + strand at 2246.920 kb on + strand at 2246.920 kb on + strand at 2246.920 kb on + strand at 2246.920 kb on + strand at 2246.921 kb on - strand at 2246.921 kb on - strand at 2246.921 kb on - strand at 2247.245 kb on - strand at 2247.245 kb on - strand at 2247.274 kb on + strand, within ABZR86_RS10120 at 2247.346 kb on + strand, within ABZR86_RS10120 at 2247.347 kb on - strand, within ABZR86_RS10120 at 2247.347 kb on - strand, within ABZR86_RS10120 at 2247.347 kb on - strand, within ABZR86_RS10120 at 2247.347 kb on - strand, within ABZR86_RS10120 at 2247.451 kb on + strand, within ABZR86_RS10120 at 2247.451 kb on + strand, within ABZR86_RS10120 at 2247.451 kb on + strand, within ABZR86_RS10120 at 2247.451 kb on + strand, within ABZR86_RS10120 at 2247.452 kb on - strand, within ABZR86_RS10120 at 2247.452 kb on - strand, within ABZR86_RS10120 at 2247.452 kb on - strand, within ABZR86_RS10120 at 2247.452 kb on - strand, within ABZR86_RS10120 at 2247.452 kb on - strand, within ABZR86_RS10120 at 2247.460 kb on + strand, within ABZR86_RS10120 at 2247.461 kb on - strand, within ABZR86_RS10120 at 2247.472 kb on + strand, within ABZR86_RS10120 at 2247.511 kb on - strand, within ABZR86_RS10120 at 2247.511 kb on - strand, within ABZR86_RS10120 at 2247.534 kb on - strand, within ABZR86_RS10120 at 2247.534 kb on - strand, within ABZR86_RS10120 at 2247.534 kb on - strand, within ABZR86_RS10120 at 2247.580 kb on + strand, within ABZR86_RS10120 at 2247.581 kb on - strand, within ABZR86_RS10120 at 2247.581 kb on - strand, within ABZR86_RS10120 at 2247.598 kb on + strand, within ABZR86_RS10120 at 2247.598 kb on + strand, within ABZR86_RS10120 at 2247.701 kb on - strand, within ABZR86_RS10120 at 2247.701 kb on - strand, within ABZR86_RS10120 at 2247.796 kb on + strand, within ABZR86_RS10120 at 2247.797 kb on - strand, within ABZR86_RS10120 at 2247.896 kb on - strand, within ABZR86_RS10120
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 2,246,098 + +0.4 2,246,098 + -0.8 2,246,098 + +0.0 2,246,099 - -0.5 2,246,099 - -0.4 2,246,099 - +0.0 2,246,099 - +1.6 2,246,099 - -0.1 2,246,119 + +0.3 2,246,119 + -0.1 2,246,120 - -0.3 2,246,128 + -0.1 2,246,920 + -0.5 2,246,920 + +1.1 2,246,920 + +0.4 2,246,920 + +0.1 2,246,920 + +0.4 2,246,920 + -0.7 2,246,920 + +0.0 2,246,921 - -0.3 2,246,921 - +0.1 2,246,921 - -0.2 2,247,245 - +0.1 2,247,245 - -0.1 2,247,274 + ABZR86_RS10120 0.11 -0.8 2,247,346 + ABZR86_RS10120 0.14 -1.6 2,247,347 - ABZR86_RS10120 0.14 +0.1 2,247,347 - ABZR86_RS10120 0.14 +0.8 2,247,347 - ABZR86_RS10120 0.14 +0.3 2,247,347 - ABZR86_RS10120 0.14 +0.9 2,247,451 + ABZR86_RS10120 0.19 -0.5 2,247,451 + ABZR86_RS10120 0.19 +0.9 2,247,451 + ABZR86_RS10120 0.19 -0.2 2,247,451 + ABZR86_RS10120 0.19 -0.8 2,247,452 - ABZR86_RS10120 0.19 -1.1 2,247,452 - ABZR86_RS10120 0.19 -0.9 2,247,452 - ABZR86_RS10120 0.19 -0.1 2,247,452 - ABZR86_RS10120 0.19 +0.7 2,247,452 - ABZR86_RS10120 0.19 -0.7 2,247,460 + ABZR86_RS10120 0.19 +0.2 2,247,461 - ABZR86_RS10120 0.19 +0.5 2,247,472 + ABZR86_RS10120 0.19 -0.3 2,247,511 - ABZR86_RS10120 0.21 +0.4 2,247,511 - ABZR86_RS10120 0.21 -0.2 2,247,534 - ABZR86_RS10120 0.22 +0.1 2,247,534 - ABZR86_RS10120 0.22 +0.3 2,247,534 - ABZR86_RS10120 0.22 -0.4 2,247,580 + ABZR86_RS10120 0.24 -0.5 2,247,581 - ABZR86_RS10120 0.24 +0.4 2,247,581 - ABZR86_RS10120 0.24 +1.7 2,247,598 + ABZR86_RS10120 0.25 -0.7 2,247,598 + ABZR86_RS10120 0.25 -0.4 2,247,701 - ABZR86_RS10120 0.30 -0.1 2,247,701 - ABZR86_RS10120 0.30 -0.8 2,247,796 + ABZR86_RS10120 0.34 +0.1 2,247,797 - ABZR86_RS10120 0.34 +0.1 2,247,896 - ABZR86_RS10120 0.38 +0.5
Or see this region's nucleotide sequence