Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS09145 and ABZR86_RS09150 are separated by 2 nucleotides ABZR86_RS09150 and ABZR86_RS09155 are separated by 144 nucleotides ABZR86_RS09155 and ABZR86_RS09160 overlap by 4 nucleotides
ABZR86_RS09145: ABZR86_RS09145 - hypothetical protein, at 2,032,159 to 2,032,809
_RS09145
ABZR86_RS09150: ABZR86_RS09150 - sigma-70 family RNA polymerase sigma factor, at 2,032,812 to 2,033,324
_RS09150
ABZR86_RS09155: ABZR86_RS09155 - DUF502 domain-containing protein, at 2,033,469 to 2,034,140
_RS09155
ABZR86_RS09160: ABZR86_RS09160 - M14 family metallopeptidase, at 2,034,137 to 2,035,918
_RS09160
Position (kb)
2033
2034
2035 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2032.560 kb on - strand, within ABZR86_RS09145 at 2032.560 kb on - strand, within ABZR86_RS09145 at 2032.918 kb on + strand, within ABZR86_RS09150 at 2032.918 kb on + strand, within ABZR86_RS09150 at 2032.919 kb on - strand, within ABZR86_RS09150 at 2033.298 kb on + strand at 2033.299 kb on - strand at 2033.299 kb on - strand at 2033.299 kb on - strand at 2033.431 kb on + strand at 2033.431 kb on + strand at 2033.493 kb on + strand at 2033.494 kb on - strand at 2033.494 kb on - strand at 2033.703 kb on + strand, within ABZR86_RS09155 at 2033.703 kb on + strand, within ABZR86_RS09155 at 2033.703 kb on + strand, within ABZR86_RS09155 at 2033.704 kb on - strand, within ABZR86_RS09155 at 2033.958 kb on + strand, within ABZR86_RS09155 at 2033.958 kb on + strand, within ABZR86_RS09155 at 2033.959 kb on - strand, within ABZR86_RS09155 at 2033.959 kb on - strand, within ABZR86_RS09155 at 2033.959 kb on - strand, within ABZR86_RS09155 at 2033.959 kb on - strand, within ABZR86_RS09155 at 2033.959 kb on - strand, within ABZR86_RS09155 at 2033.959 kb on - strand, within ABZR86_RS09155 at 2034.062 kb on + strand, within ABZR86_RS09155 at 2034.063 kb on - strand, within ABZR86_RS09155 at 2034.110 kb on + strand at 2034.111 kb on - strand at 2034.111 kb on - strand at 2034.246 kb on - strand at 2034.246 kb on - strand at 2034.246 kb on - strand at 2034.263 kb on + strand at 2034.263 kb on + strand at 2034.659 kb on + strand, within ABZR86_RS09160 at 2034.659 kb on + strand, within ABZR86_RS09160 at 2034.660 kb on - strand, within ABZR86_RS09160 at 2034.660 kb on - strand, within ABZR86_RS09160 at 2034.660 kb on - strand, within ABZR86_RS09160 at 2034.761 kb on + strand, within ABZR86_RS09160 at 2034.768 kb on - strand, within ABZR86_RS09160 at 2034.782 kb on + strand, within ABZR86_RS09160 at 2034.893 kb on + strand, within ABZR86_RS09160 at 2035.028 kb on + strand, within ABZR86_RS09160 at 2035.028 kb on + strand, within ABZR86_RS09160 at 2035.028 kb on + strand, within ABZR86_RS09160 at 2035.029 kb on - strand, within ABZR86_RS09160 at 2035.029 kb on - strand, within ABZR86_RS09160 at 2035.029 kb on - strand, within ABZR86_RS09160 at 2035.052 kb on + strand, within ABZR86_RS09160 at 2035.052 kb on + strand, within ABZR86_RS09160 at 2035.052 kb on + strand, within ABZR86_RS09160 at 2035.053 kb on - strand, within ABZR86_RS09160 at 2035.053 kb on - strand, within ABZR86_RS09160 at 2035.053 kb on - strand, within ABZR86_RS09160 at 2035.053 kb on - strand, within ABZR86_RS09160
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 2,032,560 - ABZR86_RS09145 0.62 -2.0 2,032,560 - ABZR86_RS09145 0.62 -1.7 2,032,918 + ABZR86_RS09150 0.21 -0.2 2,032,918 + ABZR86_RS09150 0.21 +0.3 2,032,919 - ABZR86_RS09150 0.21 +0.4 2,033,298 + +0.4 2,033,299 - -0.6 2,033,299 - +1.2 2,033,299 - -0.1 2,033,431 + +0.1 2,033,431 + +0.6 2,033,493 + -0.5 2,033,494 - -0.3 2,033,494 - -0.2 2,033,703 + ABZR86_RS09155 0.35 +2.5 2,033,703 + ABZR86_RS09155 0.35 +0.8 2,033,703 + ABZR86_RS09155 0.35 +0.2 2,033,704 - ABZR86_RS09155 0.35 -0.3 2,033,958 + ABZR86_RS09155 0.73 +0.1 2,033,958 + ABZR86_RS09155 0.73 -0.7 2,033,959 - ABZR86_RS09155 0.73 -1.9 2,033,959 - ABZR86_RS09155 0.73 +0.6 2,033,959 - ABZR86_RS09155 0.73 +0.9 2,033,959 - ABZR86_RS09155 0.73 -0.4 2,033,959 - ABZR86_RS09155 0.73 +0.5 2,033,959 - ABZR86_RS09155 0.73 -0.9 2,034,062 + ABZR86_RS09155 0.88 +1.6 2,034,063 - ABZR86_RS09155 0.88 -0.1 2,034,110 + +0.4 2,034,111 - -0.2 2,034,111 - -0.1 2,034,246 - +0.6 2,034,246 - +0.3 2,034,246 - +0.3 2,034,263 + -0.2 2,034,263 + +0.0 2,034,659 + ABZR86_RS09160 0.29 +0.5 2,034,659 + ABZR86_RS09160 0.29 -1.2 2,034,660 - ABZR86_RS09160 0.29 -0.1 2,034,660 - ABZR86_RS09160 0.29 +0.2 2,034,660 - ABZR86_RS09160 0.29 +0.2 2,034,761 + ABZR86_RS09160 0.35 -0.7 2,034,768 - ABZR86_RS09160 0.35 +0.7 2,034,782 + ABZR86_RS09160 0.36 +1.3 2,034,893 + ABZR86_RS09160 0.42 +0.6 2,035,028 + ABZR86_RS09160 0.50 -0.8 2,035,028 + ABZR86_RS09160 0.50 -0.4 2,035,028 + ABZR86_RS09160 0.50 +0.4 2,035,029 - ABZR86_RS09160 0.50 +0.0 2,035,029 - ABZR86_RS09160 0.50 +1.3 2,035,029 - ABZR86_RS09160 0.50 +0.9 2,035,052 + ABZR86_RS09160 0.51 +1.1 2,035,052 + ABZR86_RS09160 0.51 +0.6 2,035,052 + ABZR86_RS09160 0.51 -1.4 2,035,053 - ABZR86_RS09160 0.51 +0.0 2,035,053 - ABZR86_RS09160 0.51 +0.6 2,035,053 - ABZR86_RS09160 0.51 -0.1 2,035,053 - ABZR86_RS09160 0.51 -0.2
Or see this region's nucleotide sequence