Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS06915

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS06910 and ABZR86_RS06915 are separated by 193 nucleotidesABZR86_RS06915 and ABZR86_RS06920 are separated by 115 nucleotidesABZR86_RS06920 and ABZR86_RS06925 are separated by 88 nucleotides ABZR86_RS06910: ABZR86_RS06910 - hypothetical protein, at 1,523,601 to 1,524,083 _RS06910 ABZR86_RS06915: ABZR86_RS06915 - hypothetical protein, at 1,524,277 to 1,524,645 _RS06915 ABZR86_RS06920: ABZR86_RS06920 - hypothetical protein, at 1,524,761 to 1,525,222 _RS06920 ABZR86_RS06925: ABZR86_RS06925 - dihydrofolate reductase family protein, at 1,525,311 to 1,525,880 _RS06925 Position (kb) 1524 1525Strain fitness (log2 ratio) -2 -1 0 1 2at 1523.281 kb on + strandat 1523.282 kb on - strandat 1523.436 kb on + strandat 1523.436 kb on + strandat 1523.436 kb on + strandat 1523.436 kb on + strandat 1523.436 kb on + strandat 1523.436 kb on + strandat 1523.436 kb on + strandat 1523.436 kb on + strandat 1523.436 kb on + strandat 1523.436 kb on + strandat 1523.437 kb on - strandat 1523.437 kb on - strandat 1523.437 kb on - strandat 1523.437 kb on - strandat 1523.437 kb on - strandat 1523.548 kb on + strandat 1523.549 kb on - strandat 1523.611 kb on - strandat 1523.611 kb on - strandat 1523.649 kb on + strandat 1523.649 kb on + strandat 1523.650 kb on - strand, within ABZR86_RS06910at 1523.720 kb on + strand, within ABZR86_RS06910at 1523.720 kb on + strand, within ABZR86_RS06910at 1523.720 kb on + strand, within ABZR86_RS06910at 1523.728 kb on - strand, within ABZR86_RS06910at 1524.035 kb on - strandat 1524.219 kb on + strandat 1524.220 kb on - strandat 1524.220 kb on - strandat 1524.220 kb on - strandat 1524.251 kb on + strandat 1524.252 kb on - strandat 1524.315 kb on + strand, within ABZR86_RS06915at 1524.316 kb on - strand, within ABZR86_RS06915at 1524.316 kb on - strand, within ABZR86_RS06915at 1524.353 kb on - strand, within ABZR86_RS06915at 1524.390 kb on - strand, within ABZR86_RS06915at 1524.396 kb on - strand, within ABZR86_RS06915at 1524.396 kb on - strand, within ABZR86_RS06915at 1524.405 kb on + strand, within ABZR86_RS06915at 1524.431 kb on - strand, within ABZR86_RS06915at 1524.431 kb on - strand, within ABZR86_RS06915at 1524.527 kb on + strand, within ABZR86_RS06915at 1524.528 kb on - strand, within ABZR86_RS06915at 1524.560 kb on + strand, within ABZR86_RS06915at 1524.561 kb on - strand, within ABZR86_RS06915at 1524.599 kb on - strand, within ABZR86_RS06915at 1524.738 kb on + strandat 1524.739 kb on - strandat 1524.739 kb on - strandat 1524.819 kb on + strand, within ABZR86_RS06920at 1524.819 kb on + strand, within ABZR86_RS06920at 1524.820 kb on - strand, within ABZR86_RS06920at 1524.855 kb on + strand, within ABZR86_RS06920at 1524.855 kb on + strand, within ABZR86_RS06920at 1524.855 kb on + strand, within ABZR86_RS06920at 1524.856 kb on - strand, within ABZR86_RS06920at 1524.861 kb on + strand, within ABZR86_RS06920at 1524.862 kb on - strand, within ABZR86_RS06920at 1524.862 kb on - strand, within ABZR86_RS06920at 1525.044 kb on + strand, within ABZR86_RS06920at 1525.068 kb on + strand, within ABZR86_RS06920at 1525.069 kb on - strand, within ABZR86_RS06920at 1525.250 kb on + strandat 1525.251 kb on - strandat 1525.396 kb on - strand, within ABZR86_RS06925at 1525.425 kb on + strand, within ABZR86_RS06925at 1525.425 kb on + strand, within ABZR86_RS06925at 1525.425 kb on + strand, within ABZR86_RS06925at 1525.425 kb on + strand, within ABZR86_RS06925at 1525.425 kb on + strand, within ABZR86_RS06925at 1525.493 kb on - strand, within ABZR86_RS06925at 1525.509 kb on + strand, within ABZR86_RS06925at 1525.510 kb on - strand, within ABZR86_RS06925at 1525.510 kb on - strand, within ABZR86_RS06925at 1525.547 kb on + strand, within ABZR86_RS06925at 1525.573 kb on + strand, within ABZR86_RS06925at 1525.573 kb on + strand, within ABZR86_RS06925at 1525.573 kb on + strand, within ABZR86_RS06925at 1525.573 kb on + strand, within ABZR86_RS06925at 1525.573 kb on + strand, within ABZR86_RS06925at 1525.574 kb on - strand, within ABZR86_RS06925at 1525.588 kb on + strand, within ABZR86_RS06925at 1525.589 kb on - strand, within ABZR86_RS06925

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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1,523,281 + -2.4
1,523,282 - -0.3
1,523,436 + +0.2
1,523,436 + +0.3
1,523,436 + +0.8
1,523,436 + -0.3
1,523,436 + +0.6
1,523,436 + +0.1
1,523,436 + +0.5
1,523,436 + +0.4
1,523,436 + +1.3
1,523,436 + -0.8
1,523,437 - -0.1
1,523,437 - +0.2
1,523,437 - -0.1
1,523,437 - +0.7
1,523,437 - -0.1
1,523,548 + -0.2
1,523,549 - +0.0
1,523,611 - -0.3
1,523,611 - -0.7
1,523,649 + +0.0
1,523,649 + -0.2
1,523,650 - ABZR86_RS06910 0.10 +0.3
1,523,720 + ABZR86_RS06910 0.25 +0.0
1,523,720 + ABZR86_RS06910 0.25 +1.4
1,523,720 + ABZR86_RS06910 0.25 +1.3
1,523,728 - ABZR86_RS06910 0.26 -0.8
1,524,035 - +0.3
1,524,219 + -0.4
1,524,220 - +1.7
1,524,220 - +0.6
1,524,220 - +0.3
1,524,251 + +0.4
1,524,252 - +1.2
1,524,315 + ABZR86_RS06915 0.10 +0.4
1,524,316 - ABZR86_RS06915 0.11 -0.6
1,524,316 - ABZR86_RS06915 0.11 +0.6
1,524,353 - ABZR86_RS06915 0.21 -1.0
1,524,390 - ABZR86_RS06915 0.31 +0.5
1,524,396 - ABZR86_RS06915 0.32 +0.1
1,524,396 - ABZR86_RS06915 0.32 -0.6
1,524,405 + ABZR86_RS06915 0.35 +0.2
1,524,431 - ABZR86_RS06915 0.42 -1.2
1,524,431 - ABZR86_RS06915 0.42 +0.2
1,524,527 + ABZR86_RS06915 0.68 +2.5
1,524,528 - ABZR86_RS06915 0.68 -1.2
1,524,560 + ABZR86_RS06915 0.77 +0.6
1,524,561 - ABZR86_RS06915 0.77 -1.0
1,524,599 - ABZR86_RS06915 0.87 -0.1
1,524,738 + +1.0
1,524,739 - -1.1
1,524,739 - -0.7
1,524,819 + ABZR86_RS06920 0.13 -0.8
1,524,819 + ABZR86_RS06920 0.13 +0.3
1,524,820 - ABZR86_RS06920 0.13 +0.5
1,524,855 + ABZR86_RS06920 0.20 -0.7
1,524,855 + ABZR86_RS06920 0.20 +0.7
1,524,855 + ABZR86_RS06920 0.20 +0.2
1,524,856 - ABZR86_RS06920 0.21 -0.4
1,524,861 + ABZR86_RS06920 0.22 +0.4
1,524,862 - ABZR86_RS06920 0.22 -0.6
1,524,862 - ABZR86_RS06920 0.22 +0.4
1,525,044 + ABZR86_RS06920 0.61 +1.0
1,525,068 + ABZR86_RS06920 0.66 +1.0
1,525,069 - ABZR86_RS06920 0.67 +0.9
1,525,250 + +1.4
1,525,251 - +1.2
1,525,396 - ABZR86_RS06925 0.15 -0.4
1,525,425 + ABZR86_RS06925 0.20 +0.4
1,525,425 + ABZR86_RS06925 0.20 +1.0
1,525,425 + ABZR86_RS06925 0.20 +0.1
1,525,425 + ABZR86_RS06925 0.20 +0.6
1,525,425 + ABZR86_RS06925 0.20 +0.4
1,525,493 - ABZR86_RS06925 0.32 +0.0
1,525,509 + ABZR86_RS06925 0.35 +1.1
1,525,510 - ABZR86_RS06925 0.35 -0.6
1,525,510 - ABZR86_RS06925 0.35 -1.5
1,525,547 + ABZR86_RS06925 0.41 +0.4
1,525,573 + ABZR86_RS06925 0.46 +0.2
1,525,573 + ABZR86_RS06925 0.46 -0.7
1,525,573 + ABZR86_RS06925 0.46 -0.5
1,525,573 + ABZR86_RS06925 0.46 -0.2
1,525,573 + ABZR86_RS06925 0.46 +0.6
1,525,574 - ABZR86_RS06925 0.46 +0.1
1,525,588 + ABZR86_RS06925 0.49 -0.4
1,525,589 - ABZR86_RS06925 0.49 +0.6

Or see this region's nucleotide sequence