Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS06180

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS06175 and ABZR86_RS06180 are separated by 139 nucleotidesABZR86_RS06180 and ABZR86_RS06185 are separated by 166 nucleotidesABZR86_RS06185 and ABZR86_RS06190 are separated by 20 nucleotides ABZR86_RS06175: ABZR86_RS06175 - ACP S-malonyltransferase, at 1,384,507 to 1,385,454 _RS06175 ABZR86_RS06180: ABZR86_RS06180 - beta-ketoacyl-ACP synthase III, at 1,385,594 to 1,386,571 _RS06180 ABZR86_RS06185: ABZR86_RS06185 - 50S ribosomal protein L32, at 1,386,738 to 1,386,932 _RS06185 ABZR86_RS06190: ABZR86_RS06190 - YceD family protein, at 1,386,953 to 1,387,468 _RS06190 Position (kb) 1385 1386 1387Strain fitness (log2 ratio) -2 -1 0 1 2at 1385.518 kb on + strandat 1386.559 kb on - strandat 1386.559 kb on - strandat 1386.646 kb on + strandat 1386.647 kb on - strandat 1386.647 kb on - strandat 1386.663 kb on - strandat 1387.035 kb on - strand, within ABZR86_RS06190at 1387.035 kb on - strand, within ABZR86_RS06190at 1387.035 kb on - strand, within ABZR86_RS06190at 1387.035 kb on - strand, within ABZR86_RS06190at 1387.469 kb on - strandat 1387.541 kb on + strandat 1387.541 kb on + strandat 1387.541 kb on + strandat 1387.541 kb on + strandat 1387.541 kb on + strandat 1387.541 kb on + strandat 1387.541 kb on + strandat 1387.541 kb on + strandat 1387.541 kb on + strandat 1387.541 kb on + strandat 1387.541 kb on + strandat 1387.541 kb on + strandat 1387.541 kb on + strandat 1387.541 kb on + strandat 1387.541 kb on + strandat 1387.541 kb on + strandat 1387.541 kb on + strandat 1387.541 kb on + strandat 1387.541 kb on + strandat 1387.541 kb on + strandat 1387.541 kb on + strandat 1387.541 kb on + strandat 1387.541 kb on + strandat 1387.541 kb on + strandat 1387.541 kb on + strandat 1387.541 kb on + strandat 1387.541 kb on + strandat 1387.541 kb on + strandat 1387.541 kb on + strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.542 kb on - strandat 1387.546 kb on + strandat 1387.547 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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1,385,518 + -0.3
1,386,559 - -1.9
1,386,559 - -2.3
1,386,646 + -0.1
1,386,647 - +0.5
1,386,647 - -0.8
1,386,663 - -0.3
1,387,035 - ABZR86_RS06190 0.16 -0.6
1,387,035 - ABZR86_RS06190 0.16 -0.5
1,387,035 - ABZR86_RS06190 0.16 -0.9
1,387,035 - ABZR86_RS06190 0.16 +0.8
1,387,469 - -0.9
1,387,541 + -0.6
1,387,541 + +0.8
1,387,541 + -0.2
1,387,541 + -0.8
1,387,541 + +0.2
1,387,541 + -0.4
1,387,541 + +0.2
1,387,541 + +0.5
1,387,541 + -0.1
1,387,541 + -0.2
1,387,541 + +0.6
1,387,541 + +0.1
1,387,541 + -0.4
1,387,541 + +1.2
1,387,541 + -0.2
1,387,541 + +0.1
1,387,541 + +0.5
1,387,541 + -1.1
1,387,541 + +0.1
1,387,541 + +0.4
1,387,541 + -0.3
1,387,541 + -0.2
1,387,541 + -0.5
1,387,541 + -0.0
1,387,541 + -0.3
1,387,541 + -0.5
1,387,541 + -0.4
1,387,541 + +0.5
1,387,541 + +0.1
1,387,542 - -0.3
1,387,542 - -0.6
1,387,542 - +0.8
1,387,542 - +0.2
1,387,542 - -1.5
1,387,542 - +0.4
1,387,542 - -0.8
1,387,542 - +1.0
1,387,542 - -0.0
1,387,542 - +0.2
1,387,542 - +0.3
1,387,542 - +0.2
1,387,542 - +0.0
1,387,542 - +1.3
1,387,542 - +0.8
1,387,542 - -0.2
1,387,542 - +0.4
1,387,542 - -0.0
1,387,542 - -0.0
1,387,542 - +0.8
1,387,542 - -1.5
1,387,542 - -0.2
1,387,542 - -1.0
1,387,542 - -0.4
1,387,542 - -0.7
1,387,542 - -1.0
1,387,542 - +0.7
1,387,542 - -1.8
1,387,542 - +0.1
1,387,542 - -0.2
1,387,542 - -0.1
1,387,542 - -0.3
1,387,542 - -0.1
1,387,542 - -0.2
1,387,542 - +0.1
1,387,542 - -0.1
1,387,542 - +0.6
1,387,542 - +0.1
1,387,542 - +0.5
1,387,542 - +2.6
1,387,542 - +0.6
1,387,542 - +0.0
1,387,542 - -0.6
1,387,542 - +0.2
1,387,542 - -1.8
1,387,542 - +1.8
1,387,546 + +0.5
1,387,547 - +1.0

Or see this region's nucleotide sequence