Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS06105

Experiment: D-Glucose (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntABZR86_RS06100 and ABZR86_RS06105 are separated by 2 nucleotidesABZR86_RS06105 and ABZR86_RS06110 are separated by 10 nucleotidesABZR86_RS06110 and ABZR86_RS06115 overlap by 10 nucleotides ABZR86_RS06100: ABZR86_RS06100 - NADH-quinone oxidoreductase subunit D, at 1,370,413 to 1,371,666 _RS06100 ABZR86_RS06105: ABZR86_RS06105 - NADH-quinone oxidoreductase subunit C, at 1,371,669 to 1,372,397 _RS06105 ABZR86_RS06110: ABZR86_RS06110 - NADH-quinone oxidoreductase subunit B family protein, at 1,372,408 to 1,372,965 _RS06110 ABZR86_RS06115: ABZR86_RS06115 - NADH-quinone oxidoreductase subunit A, at 1,372,956 to 1,373,312 _RS06115 Position (kb) 1371 1372 1373Strain fitness (log2 ratio) -3 -2 -1 0 1at 1373.378 kb on - strandat 1373.378 kb on - strandat 1373.378 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
remove
1,373,378 - -0.1
1,373,378 - -3.1
1,373,378 - -1.3

Or see this region's nucleotide sequence