Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS02970 and ABZR86_RS02975 are separated by 113 nucleotides ABZR86_RS02975 and ABZR86_RS02980 are separated by 388 nucleotides
ABZR86_RS02970: ABZR86_RS02970 - PAS domain-containing sensor histidine kinase, at 606,756 to 608,690
_RS02970
ABZR86_RS02975: ABZR86_RS02975 - response regulator, at 608,804 to 609,205
_RS02975
ABZR86_RS02980: ABZR86_RS02980 - DUF3182 family protein, at 609,594 to 610,724
_RS02980
Position (kb) 608
609
610 Strain fitness (log2 ratio) -2
-1
0
1 at 608.401 kb on + strand, within ABZR86_RS02970 at 608.402 kb on - strand, within ABZR86_RS02970 at 608.402 kb on - strand, within ABZR86_RS02970 at 608.485 kb on + strand, within ABZR86_RS02970 at 608.521 kb on + strand at 608.521 kb on + strand at 608.521 kb on + strand at 608.521 kb on + strand at 608.626 kb on + strand at 608.626 kb on + strand at 608.627 kb on - strand at 608.627 kb on - strand at 608.636 kb on - strand at 608.666 kb on - strand at 609.044 kb on + strand, within ABZR86_RS02975 at 609.044 kb on + strand, within ABZR86_RS02975 at 609.044 kb on + strand, within ABZR86_RS02975 at 609.732 kb on + strand, within ABZR86_RS02980 at 609.732 kb on + strand, within ABZR86_RS02980 at 609.732 kb on + strand, within ABZR86_RS02980 at 609.732 kb on + strand, within ABZR86_RS02980 at 609.732 kb on + strand, within ABZR86_RS02980 at 609.733 kb on - strand, within ABZR86_RS02980 at 609.733 kb on - strand, within ABZR86_RS02980 at 609.733 kb on - strand, within ABZR86_RS02980 at 609.733 kb on - strand, within ABZR86_RS02980 at 609.733 kb on - strand, within ABZR86_RS02980 at 609.780 kb on + strand, within ABZR86_RS02980 at 609.780 kb on + strand, within ABZR86_RS02980 at 609.780 kb on + strand, within ABZR86_RS02980 at 609.988 kb on - strand, within ABZR86_RS02980 at 610.055 kb on + strand, within ABZR86_RS02980 at 610.055 kb on + strand, within ABZR86_RS02980 at 610.056 kb on - strand, within ABZR86_RS02980
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 608,401 + ABZR86_RS02970 0.85 -1.3 608,402 - ABZR86_RS02970 0.85 +0.9 608,402 - ABZR86_RS02970 0.85 -0.2 608,485 + ABZR86_RS02970 0.89 +0.2 608,521 + -0.2 608,521 + -0.4 608,521 + +0.0 608,521 + -0.1 608,626 + -0.9 608,626 + +0.1 608,627 - -0.9 608,627 - -0.5 608,636 - +1.1 608,666 - -1.0 609,044 + ABZR86_RS02975 0.60 -0.5 609,044 + ABZR86_RS02975 0.60 -0.8 609,044 + ABZR86_RS02975 0.60 -0.5 609,732 + ABZR86_RS02980 0.12 +0.2 609,732 + ABZR86_RS02980 0.12 +0.6 609,732 + ABZR86_RS02980 0.12 +0.7 609,732 + ABZR86_RS02980 0.12 -0.3 609,732 + ABZR86_RS02980 0.12 +0.7 609,733 - ABZR86_RS02980 0.12 -1.1 609,733 - ABZR86_RS02980 0.12 -0.3 609,733 - ABZR86_RS02980 0.12 +0.2 609,733 - ABZR86_RS02980 0.12 -0.3 609,733 - ABZR86_RS02980 0.12 -0.8 609,780 + ABZR86_RS02980 0.16 +0.7 609,780 + ABZR86_RS02980 0.16 +0.1 609,780 + ABZR86_RS02980 0.16 +0.0 609,988 - ABZR86_RS02980 0.35 +0.5 610,055 + ABZR86_RS02980 0.41 -2.0 610,055 + ABZR86_RS02980 0.41 +0.3 610,056 - ABZR86_RS02980 0.41 -0.2
Or see this region's nucleotide sequence