Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_486

Experiment: pyruvate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_484 and Ac3H11_485 are separated by 68 nucleotidesAc3H11_485 and Ac3H11_486 are separated by 30 nucleotidesAc3H11_486 and Ac3H11_487 are separated by 11 nucleotides Ac3H11_484 - Molybdopterin biosynthesis protein MoeA, at 181,643 to 183,010 _484 Ac3H11_485 - GCN5-related N-acetyltransferase, at 183,079 to 183,678 _485 Ac3H11_486 - Molybdopterin-guanine dinucleotide biosynthesis protein MobA, at 183,709 to 184,347 _486 Ac3H11_487 - Molybdenum cofactor biosynthesis protein MoaA, at 184,359 to 185,513 _487 Position (kb) 183 184 185Strain fitness (log2 ratio) -2 -1 0 1 2at 182.796 kb on + strand, within Ac3H11_484at 182.796 kb on + strand, within Ac3H11_484at 182.797 kb on - strand, within Ac3H11_484at 182.970 kb on + strandat 182.970 kb on + strandat 182.970 kb on + strandat 182.971 kb on - strandat 182.971 kb on - strandat 183.080 kb on + strandat 183.080 kb on + strandat 183.081 kb on - strandat 183.081 kb on - strandat 183.081 kb on - strandat 183.081 kb on - strandat 183.081 kb on - strandat 183.143 kb on + strand, within Ac3H11_485at 183.143 kb on + strand, within Ac3H11_485at 183.143 kb on + strand, within Ac3H11_485at 183.143 kb on + strand, within Ac3H11_485at 183.144 kb on - strand, within Ac3H11_485at 183.209 kb on + strand, within Ac3H11_485at 183.209 kb on + strand, within Ac3H11_485at 183.209 kb on + strand, within Ac3H11_485at 183.210 kb on - strand, within Ac3H11_485at 183.272 kb on - strand, within Ac3H11_485at 183.272 kb on - strand, within Ac3H11_485at 183.272 kb on - strand, within Ac3H11_485at 183.488 kb on + strand, within Ac3H11_485at 183.488 kb on + strand, within Ac3H11_485at 183.488 kb on + strand, within Ac3H11_485at 183.488 kb on + strand, within Ac3H11_485at 183.488 kb on + strand, within Ac3H11_485at 183.488 kb on + strand, within Ac3H11_485at 183.488 kb on + strand, within Ac3H11_485at 183.489 kb on - strand, within Ac3H11_485at 183.489 kb on - strand, within Ac3H11_485at 183.489 kb on - strand, within Ac3H11_485at 183.489 kb on - strand, within Ac3H11_485at 183.489 kb on - strand, within Ac3H11_485at 183.508 kb on + strand, within Ac3H11_485at 183.509 kb on - strand, within Ac3H11_485at 183.521 kb on + strand, within Ac3H11_485at 183.521 kb on + strand, within Ac3H11_485at 183.522 kb on - strand, within Ac3H11_485at 183.578 kb on + strand, within Ac3H11_485at 183.578 kb on + strand, within Ac3H11_485at 183.578 kb on + strand, within Ac3H11_485at 183.578 kb on + strand, within Ac3H11_485at 183.578 kb on + strand, within Ac3H11_485at 183.578 kb on + strand, within Ac3H11_485at 183.578 kb on + strand, within Ac3H11_485at 183.578 kb on + strand, within Ac3H11_485at 183.579 kb on - strand, within Ac3H11_485at 183.579 kb on - strand, within Ac3H11_485at 183.579 kb on - strand, within Ac3H11_485at 183.928 kb on + strand, within Ac3H11_486at 184.121 kb on + strand, within Ac3H11_486at 184.121 kb on + strand, within Ac3H11_486at 184.122 kb on - strand, within Ac3H11_486at 184.166 kb on + strand, within Ac3H11_486at 184.166 kb on + strand, within Ac3H11_486at 184.166 kb on + strand, within Ac3H11_486at 184.372 kb on + strandat 184.372 kb on + strandat 184.372 kb on + strandat 184.372 kb on + strandat 184.372 kb on + strandat 184.373 kb on - strandat 184.373 kb on - strandat 184.373 kb on - strandat 184.373 kb on - strandat 184.438 kb on + strandat 184.528 kb on + strand, within Ac3H11_487at 184.528 kb on + strand, within Ac3H11_487at 184.555 kb on + strand, within Ac3H11_487at 184.555 kb on + strand, within Ac3H11_487at 184.555 kb on + strand, within Ac3H11_487at 184.555 kb on + strand, within Ac3H11_487at 184.555 kb on + strand, within Ac3H11_487at 184.555 kb on + strand, within Ac3H11_487at 184.555 kb on + strand, within Ac3H11_487at 184.556 kb on - strand, within Ac3H11_487at 184.556 kb on - strand, within Ac3H11_487at 184.556 kb on - strand, within Ac3H11_487at 184.675 kb on + strand, within Ac3H11_487at 184.816 kb on + strand, within Ac3H11_487at 184.816 kb on + strand, within Ac3H11_487at 184.816 kb on + strand, within Ac3H11_487at 184.816 kb on + strand, within Ac3H11_487at 184.816 kb on + strand, within Ac3H11_487at 184.816 kb on + strand, within Ac3H11_487at 184.817 kb on - strand, within Ac3H11_487at 184.817 kb on - strand, within Ac3H11_487at 184.817 kb on - strand, within Ac3H11_487at 184.817 kb on - strand, within Ac3H11_487at 184.817 kb on - strand, within Ac3H11_487at 184.817 kb on - strand, within Ac3H11_487at 185.290 kb on + strand, within Ac3H11_487at 185.291 kb on - strand, within Ac3H11_487at 185.291 kb on - strand, within Ac3H11_487at 185.296 kb on + strand, within Ac3H11_487at 185.329 kb on + strand, within Ac3H11_487at 185.329 kb on + strand, within Ac3H11_487at 185.329 kb on + strand, within Ac3H11_487at 185.329 kb on + strand, within Ac3H11_487at 185.329 kb on + strand, within Ac3H11_487at 185.330 kb on - strand, within Ac3H11_487at 185.330 kb on - strand, within Ac3H11_487at 185.330 kb on - strand, within Ac3H11_487

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Per-strain Table

Position Strand Gene LocusTag Fraction pyruvate (C)
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182,796 + Ac3H11_484 0.84 +0.9
182,796 + Ac3H11_484 0.84 -0.0
182,797 - Ac3H11_484 0.84 +0.4
182,970 + +0.2
182,970 + +0.5
182,970 + -0.4
182,971 - -0.2
182,971 - +0.5
183,080 + -0.9
183,080 + +0.3
183,081 - +0.1
183,081 - +0.5
183,081 - -0.3
183,081 - -1.4
183,081 - -0.1
183,143 + Ac3H11_485 0.11 -0.1
183,143 + Ac3H11_485 0.11 -2.0
183,143 + Ac3H11_485 0.11 -0.7
183,143 + Ac3H11_485 0.11 -0.3
183,144 - Ac3H11_485 0.11 +0.8
183,209 + Ac3H11_485 0.22 -0.4
183,209 + Ac3H11_485 0.22 +0.7
183,209 + Ac3H11_485 0.22 +0.1
183,210 - Ac3H11_485 0.22 -0.7
183,272 - Ac3H11_485 0.32 -1.0
183,272 - Ac3H11_485 0.32 -0.4
183,272 - Ac3H11_485 0.32 +0.5
183,488 + Ac3H11_485 0.68 +0.4
183,488 + Ac3H11_485 0.68 +0.5
183,488 + Ac3H11_485 0.68 +0.1
183,488 + Ac3H11_485 0.68 +0.6
183,488 + Ac3H11_485 0.68 +0.6
183,488 + Ac3H11_485 0.68 +0.0
183,488 + Ac3H11_485 0.68 +0.4
183,489 - Ac3H11_485 0.68 +0.2
183,489 - Ac3H11_485 0.68 -0.1
183,489 - Ac3H11_485 0.68 -0.4
183,489 - Ac3H11_485 0.68 +0.6
183,489 - Ac3H11_485 0.68 +0.3
183,508 + Ac3H11_485 0.71 +0.1
183,509 - Ac3H11_485 0.72 +0.6
183,521 + Ac3H11_485 0.74 +0.3
183,521 + Ac3H11_485 0.74 +1.4
183,522 - Ac3H11_485 0.74 +0.2
183,578 + Ac3H11_485 0.83 -0.7
183,578 + Ac3H11_485 0.83 +0.2
183,578 + Ac3H11_485 0.83 +0.6
183,578 + Ac3H11_485 0.83 +0.8
183,578 + Ac3H11_485 0.83 -0.1
183,578 + Ac3H11_485 0.83 -0.3
183,578 + Ac3H11_485 0.83 -2.3
183,578 + Ac3H11_485 0.83 -0.1
183,579 - Ac3H11_485 0.83 +0.5
183,579 - Ac3H11_485 0.83 -0.4
183,579 - Ac3H11_485 0.83 +0.2
183,928 + Ac3H11_486 0.34 -0.2
184,121 + Ac3H11_486 0.64 -0.1
184,121 + Ac3H11_486 0.64 -0.2
184,122 - Ac3H11_486 0.65 +0.4
184,166 + Ac3H11_486 0.72 +1.9
184,166 + Ac3H11_486 0.72 +0.0
184,166 + Ac3H11_486 0.72 +0.2
184,372 + +0.2
184,372 + -0.2
184,372 + +1.5
184,372 + +0.2
184,372 + +1.1
184,373 - +0.3
184,373 - -0.8
184,373 - +0.3
184,373 - +0.1
184,438 + -0.1
184,528 + Ac3H11_487 0.15 +0.1
184,528 + Ac3H11_487 0.15 -0.0
184,555 + Ac3H11_487 0.17 +0.1
184,555 + Ac3H11_487 0.17 -0.4
184,555 + Ac3H11_487 0.17 -0.7
184,555 + Ac3H11_487 0.17 +0.6
184,555 + Ac3H11_487 0.17 -1.0
184,555 + Ac3H11_487 0.17 -0.0
184,555 + Ac3H11_487 0.17 +1.0
184,556 - Ac3H11_487 0.17 -0.6
184,556 - Ac3H11_487 0.17 -0.3
184,556 - Ac3H11_487 0.17 +0.0
184,675 + Ac3H11_487 0.27 -0.3
184,816 + Ac3H11_487 0.40 -0.3
184,816 + Ac3H11_487 0.40 +0.3
184,816 + Ac3H11_487 0.40 +0.0
184,816 + Ac3H11_487 0.40 -0.3
184,816 + Ac3H11_487 0.40 +0.1
184,816 + Ac3H11_487 0.40 -0.4
184,817 - Ac3H11_487 0.40 -0.9
184,817 - Ac3H11_487 0.40 -0.6
184,817 - Ac3H11_487 0.40 -0.0
184,817 - Ac3H11_487 0.40 +0.7
184,817 - Ac3H11_487 0.40 +0.0
184,817 - Ac3H11_487 0.40 -0.4
185,290 + Ac3H11_487 0.81 -0.7
185,291 - Ac3H11_487 0.81 -0.1
185,291 - Ac3H11_487 0.81 +0.1
185,296 + Ac3H11_487 0.81 +1.0
185,329 + Ac3H11_487 0.84 -0.1
185,329 + Ac3H11_487 0.84 +0.7
185,329 + Ac3H11_487 0.84 -0.4
185,329 + Ac3H11_487 0.84 -0.2
185,329 + Ac3H11_487 0.84 +0.4
185,330 - Ac3H11_487 0.84 +0.2
185,330 - Ac3H11_487 0.84 +0.3
185,330 - Ac3H11_487 0.84 -0.4

Or see this region's nucleotide sequence